Cyprinodon tularosa (White Sands pupfish): 119797580
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Entry
119797580 CDS
T07496
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119797580 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119797580 (cstf3)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119797580 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
Motif
Other DBs
NCBI-GeneID:
119797580
NCBI-ProteinID:
XP_038162644
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSSEGATDQTAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTHERLVS
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYTNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFAFADYEESRMKYEKV
HNIYNKLLAVEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDLRTRHHVYVSAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAALLPEAVVAPSVPTLKDDPDRKPEYPKPDTNQMIPYQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPESVDAAVELIT
GRQPEAAGEGNGSMENHATAKSLKRPNADSDEEEDKGAIAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggagggagcaaccgaccagacagcagcagagtatattccagagaaggtgaaa
aaagcagagaagaagttggaagaaaacccatacgaccttgacgcatggagcattctgatt
cgagaagcacagaatcagcccatagataaagcgaggaagacccatgagcgacttgtttca
cagttcccgagttctggcagattctggaaactgttcattgaagctgagataaaggctaaa
aactatgacaaggtagagaagttgtttcagagatgcctaatgaaagtgttgcacattgac
ctgtggaagtgctaccttgcatatgttcgagagaccaaagggaagctccccagctacaaa
gagaagatggcacaagcgtacgactttgcccttgataaaatcggcatggaaattatgtcc
tatcagatttgggtggactacatcaatttccttaaaggagttgaggccgtgggctcatat
gccgagaatcagagaatcactgctgttaggagagtctaccaaaggggatgtgtgaaccca
atgattaacattgaacagctgtggagagactatagcaaatatgaagagggaattaatgtg
catttggctaaaaagatgattgaagatcggagcagggattacacgaatgcaaggagagtg
gccaaggagtatgagacggtgatgaaaggcctagacagaaacgcaccttcagtcccacca
caaaactcccctcaggaggcccagcaagtggagatgtggaaaaaatacattcagtgggaa
aaaagcaacccgctgcgtacagaagaccagaccctcatcactaagagagtgatgtttgcc
tatgagcagtgcctgctggtgctgggccaccatcctgacatttggtatgaagcagcacag
tacctggaacagtccagcaagctgctggcagagaaaggggacatgaataattcaaagctg
ttcagtgacgaagcagctaacatctacgaacgtgccatcgggactctcctcaaaaagaac
atgctcctctactttgcatttgccgactacgaagagagtcgcatgaagtacgagaaagtc
cacaacatctacaacaaactactggcagtcgaggacatcgaccccaccctggtctacatc
cagtacatgaagttcgccaggagggcagagggcatcaaatcaggccgctccatcttcaag
aaggcaagggaggacctacgtacacgtcaccatgtgtacgtgtctgcagcgctgatggag
tactactgcagcaaagataaatcagtggcctttaagatatttgagctgggtttgaagaaa
tatggagacattccggagtacatactggcgtacattgattacttatcacaccttaatgag
gataacaacactagggttttgttcgaacgtgtccttacctctggaagcttatccccagaa
aaatcaggggagatctgggctcggttcttggcgttcgagagcaacatcggagacctggcc
agtattctgaaagtcgagcgccgtcgtttcacagccttcaaagatgaatatgagggcaaa
gaaacagctttgcttgtagatagatacaagttcatggacctttatccctgctctaccagt
gaacttaaagctcttggttacaaggatgtgtctcgtgccaaactggctgcacttctccct
gaggctgtggtggccccctctgtgcctacactaaaggatgatccagatcgtaaaccagag
tatcccaaaccagacaccaaccagatgatcccctatcagccacgtcatctcgctccacca
ggcctacatccagtccctggtggagttttcccagtccccccagctgctgttgtcctaatg
aagctgctgcctccgcctacatgcttcactggtccttttgtccaagtggatgagctcatg
gaaacttttaggagatgcacacttcctgagagtgtcgacgctgctgtggagctcatcaca
ggcaggcagcctgaggctgcaggcgaggggaacggctccatggagaaccacgctaccgcc
aagtcactcaagaggccaaacgcggactctgatgaggaggaagacaagggagctatagct
ccaccaattcatgacatctaccgcgcacgccagcagaagaggattcgataa
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integrated database retrieval system
