Cyprinodon tularosa (White Sands pupfish): 119797874
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Entry
119797874 CDS
T07496
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119797874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119797874
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
119797874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
119797874
NCBI-ProteinID:
XP_038163040
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All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MRKPVPQKAIEWKDARIIKHARSGRPSRVPSQYQAGHFSWEKYLKETGATAAPSSCFKQS
LTPPVNEFKVGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEI
QPIGSCEKSGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPSRIFHKQEPPSPEQNSFQV
GMKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCALTG
DNLQPPGTKAVLPKSLGPLTEGSVENPAMNPTPTVGRPPGQRGRKPGRRKTKITGSWSQK
ASALVSQSIQPGKDLEPIKIPKKRGPKPGSKLGWGKRDGWFGEALTGPGRPVTGPGRTRR
GFLASWAQRIALQEAQAESIKIPKKRGPKPGSKRKPRVLPNPVPTSPTSSTPEPDTSTVP
QDNATIPNSALQAPTVCVYLNKYGNMGPHLDLRRVQQLPDHFGPGRASSVLQQCVQACVD
SAHNQATVFSCLKSGQGGEVISAFFDQQQHTLTLPTVSSVTYVLRFLEKLCHNLHCDALF
GSQPVARGGVHYDSQSYSAERRGFGDSLTAGPGKGTKRFHQDVNGPLSQKLAKLPRLSAD
GENSVSGSEHLKKIPLSPNCPGLTPGLRSPSKLLHHNSSAGSGSFRESPRPSGQDPNLWT
VEEVMQYIRDSDPVLAPHADLFRKHEIDGKALLLLRSDVMMKYMGLKLGPALKLTFHIDK
LKRA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacctgtgccacaaaaagcgatagaatggaaagatgcccgaatcatcaagcat
gctcggagtggacggccctctcgggtgccttcacagtaccaagcagggcacttcagctgg
gagaaatacttgaaagaaacgggtgctaccgctgctccatcttcatgtttcaaacagagt
ctaacgcctccagttaatgagtttaaagtggggatgaagctggaggcccaggatccgagg
aacaccacgtccacttgcatcgcaactgtcgtcggcctaacaggatcaaggctgcggcta
cgcttggacgggtcggacaataagaacgacttttggcgcctggttgattcctctgagatc
cagccaattggcagctgtgaaaagagcggagggatgttacagccacccttaggtttccgt
ctaaatgcgtcttcctggcccatgtttctgctgaaaacgctaaatggtgctgaaatggct
ccctctcgcattttccacaagcaggagcctccctccccagagcagaactccttccaggtg
ggaatgaagctggaggcggtggatcggaaaaatccacacttcatctgtccggctacagtt
ggtgcgctgcgcggcgtcgaggtgctggtcaccttcgacggatggcgcggggcctttgat
tactactgtcgctacgattcgcgggacatatttcctgttggctggtgcgccctgactgga
gacaaccttcagccacctggcacaaaagctgtgctgccaaagagccttggtcctctgaca
gagggtagtgtagaaaacccagcgatgaatcccaccccgacggtggggaggcctcctggt
cagagaggccgtaagcccgggcgcaggaaaacaaaaatcaccggctcctggagtcagaaa
gcttctgctttggtatcacaaagcatccagccagggaaggatttggagcccattaaaatc
cccaagaaacgaggacctaagccgggcagtaagctgggatggggaaagagagatggctgg
tttggggaggccctgaccggacctggacggccagtgacaggaccagggagaaccagaaga
ggatttcttgccagttgggcacagaggattgctctgcaggaggcccaggctgaatcaatc
aagatcccaaagaaaagagggcccaagcccggcagcaagagaaaacctcgtgtgctaccc
aatcctgtcccaacgtctcccaccagcagcactccagagcctgacaccagtactgtaccc
caagataatgccaccatccccaactctgcactgcaagctcctacagtttgtgtgtatcta
aataagtacggtaacatgggaccccatctagatctgcggcgcgtccagcagctcccagac
cacttcggtccgggtcgggcctcctcggtgctgcagcagtgtgttcaggcttgtgtggac
tccgctcacaaccaggctacagttttctcctgtctcaagtcgggacagggaggagaggtc
atttcagcattctttgaccagcagcagcacactctgaccctccccactgtcagtagcgtc
acatacgtcctccgtttcttggaaaaactctgtcacaaccttcactgcgacgctttgttc
ggcagccagcctgtggcacgaggaggcgttcactatgacagtcagtcatactctgcagag
aggagaggtttcggtgactccctgaccgctggcccaggcaaaggcacaaagcgcttccat
caggacgtcaacggacctctgtctcagaaactagctaagctcccaaggctatctgctgat
ggtgagaatagcgtttcaggatcggagcacttaaagaaaatcccactttctccaaactgt
ccaggactgacgcctggccttagatctccctccaaactgcttcatcataacagctctgca
ggttcaggcagtttccgggagagtcccagacccagcggtcaggatccaaacctttggact
gttgaggaagtcatgcagtatattcgagatagtgacccagttctggctccacatgctgac
cttttcagaaaacatgagattgatggtaaagcccttctgttactgcgcagtgatgttatg
atgaaatacatgggtctgaagcttgggcccgcgctcaaactcaccttccacatcgacaag
cttaaacgagcttaa
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