Cyprinodon tularosa (White Sands pupfish): 119798008
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Entry
119798008 CDS
T07496
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119798008
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119798008
Spliceosome [BR:
ctul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119798008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119798008
NCBI-ProteinID:
XP_038163248
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MRGGSSYGDRDRDRDRGRDRPRFGGGMGGRGGPPPMKFGNPGERLRKKRWNLDELPKFEK
NFYTEHPEVQRMSQFDVEEFRRKKEITIRGSGCPKPVTAFHHAQFPQYVIDVLVQQNFKE
PTAIQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT
RELAQQVQQVAYDYGKTSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRE
YIQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTILFVETKKRCDD
LTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINY
DYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVD
SGRGGGGGGRMRYRGGSSNNPNLMYQDECDRRMRSGGGGKDSRGGFNRDGRNNRDDDQSS
ASSYRDRNRDHRNNYNSGSDQYQNYNNNGGGYNSRGGGGLPGGGQDIPNQPQGQFVQGPP
PPSGAPQPLMAQQFPQPPLMGFMGQPPYPPFPSAPPPPPGQQPPRK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagggggggttcctcgtatggagacagggatagagacagagatcgtggacgtgacagg
ccacggtttggagggggcatgggcggccgtggtggacccccgcccatgaagtttggaaat
cctggtgagcgactccgcaaaaagaggtggaacctcgacgagctgccgaaattcgagaaa
aatttctacaccgaacacccagaagtacagcgcatgagtcaattcgatgtggaggagttc
cgtaggaagaaggagatcaccatcagaggctctggttgtccaaaacctgtgacggctttt
caccatgctcagtttcctcagtatgttatagatgtgctggtgcagcagaacttcaaggag
cccacagcaatccaatcccaaggttttcctgtggccttgagtgggaaggacatggtggga
attgcacagactggttctggaaagacactggcttatctccttcctgctattgtacatatt
aaccatcagccctatctggagagaggggatggacccatatgcctggtccttgctccaacc
agagagctggcccagcaggttcagcaggttgcctacgattatggcaagacctcccggatc
aagagcacctgcgtttatggtggagcacccaagggaccacagattcgagaccttgagaga
ggcgttgagatctgcatcgccactcccggtcgcctcattgacttcctggaggcggggaag
accaacctgcgtcgctgcacctatttggtgttggatgaggccgaccgcatgttggatatg
ggctttgagccgcagattcgcaagattgttgaacagatcagacccgacagacagaccctg
atgtggagtgcgacatggccaaaagaagttcgacagcttgcagaggacttcttacgggaa
tacatccagattaatatcggcgctctggagctcagtgccaaccacaacattcttcagata
gtggacgtctgcatggagaatgaaaaggacaacaaacttattcagctgatggaggagatc
atggctgagaaggagaacaaaaccatcctctttgtggagaccaaaaaacgatgtgatgat
ctcacacggaggatgaggcgtgacgggtggccagccatgtgtatccatggagacaagagc
cagccagagcgagactgggtactcactgagttcaggagcggcaaggcccccatcctgatt
gcaactgatgttgcctctcggggtctggatgtggaagatgtaaaattcgtcatcaactat
gactatcccagctcctctgaggattatgtccaccgtattggccgtacggcccgcagtacc
aataagggcacagcctacaccttcttcaccccaggaaacctgcgacaggccagagacctg
gtccgggttctggaggaagcccggcaggccataaatccaaaactgcttcaactcgtggac
tcgggccgtggaggtggaggcggtggcagaatgcgttaccgtggcggcagctccaacaac
cctaacctaatgtaccaagacgagtgtgatcggcgcatgcgctctggtggaggcggcaaa
gatagccgcgggggctttaaccgcgatggccgcaacaaccgcgacgacgaccaatcctca
gcatcctcctacagagacagaaacagagatcacaggaacaactacaactccggctccgat
cagtaccagaactacaacaacaacggtgggggctacaactctcgtggcggaggaggcctg
cccggcggcggtcaggatatacccaaccagccacagggccagttcgtccagggccctccg
cctccatcgggggccccacagccactgatggcgcagcagtttccacagccgccactcatg
ggctttatggggcagccgccataccctccttttccctctgctccccctcctccccctggc
cagcaaccccctcgaaaatag
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