Cyprinodon tularosa (White Sands pupfish): 119798014
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Entry
119798014 CDS
T07496
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119798014 (htt)
04131 Membrane trafficking [BR:
ctul04131
]
119798014 (htt)
03029 Mitochondrial biogenesis [BR:
ctul03029
]
119798014 (htt)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119798014 (htt)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
119798014 (htt)
Mitochondrial biogenesis [BR:
ctul03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
119798014 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
119798014
NCBI-ProteinID:
XP_038163256
LinkDB
All DBs
Position
Unknown
AA seq
3180 aa
AA seq
DB search
MATMEKLMKAFESLKTFQQQQGPPTAEELVQKQKKEQAATKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLTRIAKRQEESVQETLAAAIPKI
LSALGNFANDGEVKVLLRSFIANLKSCSPTIRRTAASSAVSVCQHSRRTSYFYTWLLNVL
LGLVLPVDDEHPSHLILGVLLTLRYLMPLLQHQVNTISLKGSFGVMRKEADVQPTPEQLL
QVYELTLHYTQHWDHNVVTAALELLQQMFRTPPPELLHMLITVGSVPHATVFRQDTESRA
RSGSIVELISGGGSSCSPLLLRKQRGKILSGEEDGLEDDSERAEVPAGAFTADGSSTTQV
DIITEQPRSSQRTLQPGDSVDLSASLEQGGGGGTSPESNNENEEEMLSRSSSGANVTPET
ADYTTPENSTPEGGGPLEGVAALGSNDRSLPPSDSSQTTTEGPDSAVTPTDVAELVLDGS
ESQYSGMQIGTLQDEEDEGAAASSSQEEPSEPFLQSALALSKPHLFDGRGHNRQGSDSSV
DRFIPKEEPAEPEPDNKPSRIKGPIGHYTDQRAEPLVHCVRLLAASFLLTGQKNGLIPDK
EVRVSVKALAVSCVGAAAALHPEAFFNSLYLEPLDGQPVAEQQYVSDVLGLIAHGDPQIR
GATAILCGAIIQAALTKTRYNIHTWLASVQSATGNPLSLVDLVPLLQKALKDESSVTCKM
ACAAVRHCIMTLCSSTLSELGLQLVIDLFALRDSSYWLVRTELLETLSELDFRLINFLER
KTETLHKGDHHYTGRLRIQDRVLNDVVIHLLGDDDPRVRHVAASAVSRLVPRLFFDCDQG
QVDPVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYSFSNSVSDVTLENNLSRV
VTAVSHAFTSSTSRALTFGCCEALCLLASHFPVGSWSTGWHCGYVSSSSNFSSRSSLSRS
RGRTLSLSQSSSAPASSAPPSSAGDSERRTLTVGVANMVLSLLSSAWFPLDLSAHQDALL
LCGNLLAAVAPKCLRNPWAGEEEGSSGNPNPGPNKIEEPWAALSERSLVAMVEQLFSHLL
KVLNICAHVLDDTPPGPAVKAALPSLSNTPSLSPIRRKGKEKETAEPNTAPMSPKKSNEI
NTAGRQTDSTASAAVNKSITLGSFYHLPPYLKLYDVLKATHANYRVTLDLYSNQEKFGGF
LHAALDVLSQLLELATLHDIGKCVEEILGYLKSCFSREPTMATVCVQQLLKTLFGTNLAS
QYESVLSGPSRSQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQD
ASGWFDVMQKASNQLRSNIANATRQRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQR
QVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFFFLVLLSY
ERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVYDLFVLRGSNKADAGKELET
QKEVVVSMLLRLVQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMIAKQQMLLD
SPEALGVLNTLFETVAPSSLRPVDMLLKSMFTIPVTMASVATVQLWVSGILAVLRVLVSQ
STEDIVLSRVHELSLSPHLLSCYTIRRLHQQSPSSSDPPAAETGCNQEANGDPQKVPPEE
TFARFLLQLVGVLLDDISSRRIKVDITEQQHTFYCQQLGTLLMCLIHVFKSGMFRRITAA
ASRLLKGEAGSETGLYYPLEGLNCMFQSLVTTHPPLVLLWCQVLLIINYTNYSWWTEVHQ
TPRGHSLSCSKLLSPHSSGEGEEEKPESRLAMVNREIVRRGALILFCDYVCQNLHDSEHL
TWLIVNHVRDLISLSHEPPVQDFISAIHRNSAASGLFIQAIQSRCDNLTTPTMLKKTLQC
LEGIHLSQSGSLLMLYVDKLLNTPFRVLARMVDTLACRRVEMLLAETLQNSIAQLPVEEL
ERIQEYLQTSGLAQRHQRFYSLLDRFRATVADTSSPKPPVTSHPLDGDPPIPPENVAADK
EWYVALVKSQCSLGGDVSLLETTELLTKLPAADLLSVMSCKDFNLGLLCPCLSLGMQRLT
RGQGSLLLETALQVTLEQLAAVTVSLPVPHQPFLPPPEPQTYWNQLGDVYDEPGFYPRVL
ALCRALSQYLLSVNQLPSSLHIPSDKEHLITSFTCTAAEVVVWRLLQDHLPLSVDLQWAL
SCLCLALQQPCVWNKLSTFEYKTHTCSLIYCLHLIIAAVAVHPGERLLPSEKKKAQGERD
DEDQLDSAHPNNECEWRACEIMAELVEGLQSVLSLGHPKNSAFPVFLTPTLRNIIISISR
LPLVNSYTRVPPLVWKLGWSPQAGGEFGTTLPEIPVDFLQEKDVFREFLYRINTLGWSSR
TQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAITSLVLSAMTLPTAG
NPAVSCLEQQPRNKSLKALETRFGRKLAVIRGEVEREIQSLVSKRDNVSTHHPYHAWDPV
PSLSAASAAGTLISHEKLLLQINTERELGNMDYKLGQVSIHSVWLGNNITPLREEEWGED
EEDEADTPAPASPPLSPINSRKHRAGVDIHSCSQFLLELYSQWLIPGSPGNRRTPTILIS
EVVRSLLAVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLVPAICKAAAVLGMDKA
IAEPVCRLLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPTVSEYLLSNLRAIA
HCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFMAAVIQLCGVMVSASEDSTPSIIYHCV
LRGLERLLLSEQLSRVNGEALVKLSVDRVNMPSPHRAMAALGLMLTCMYTAVLASGSDAT
GVTGQVDCAVAEAVGVTAGHVGFSSGKEKASPASRPPHSDPQVPDSESVIVAMERVSVLF
DRIRKGLPSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQT
LHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVISRMGS
SDVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGSPYHQLLGCLQSIHLEASL
NT seq
9543 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatggagaagctaatgaaggcttttgagtctctgaagacttttcagcagcag
cagggaccaccgactgcagaggagctcgttcagaaacagaaaaaggagcaagcagcaaca
aaaaaggaccgagtgacccactgcctaaccatatgtgaaaacattgtggctcagtcatta
agaacatccccagagtttcagaaactgctcgggatcgccatggagatgtttcttctctgc
agtgatgacagtgaatcggatgtccgtatggtggctgatgagtgcctgaataaaatcatc
aaagcactgatggactcaaacttaccaagactacagctggagctgtacaaagaaataaaa
aagaacggtgcctcacggagtctgagggcggctttgtggaggtttgctgagctagctcat
ctcatccgaccgcagaaatgcagaccatatttggtcaacctgctgccatgcctcacacgg
atcgcaaagcgtcaggaggaatctgtgcaggagacactggctgcagccatccccaagatc
ctgtcagccttggggaactttgctaatgatggcgaagtcaaggtgttgctgaggtcattt
attgccaacctgaagtcctgctcccccaccatcagacggacagcagccagctctgcggtc
agcgtgtgccaacactccagacgcaccagctacttctatacatggctcctcaatgtgctg
cttggcttggtgcttccagtggatgacgaacaccccagccatcttattctgggggtgctg
ttaactcttcgctacctgatgcctcttctgcagcaccaagtaaacaccatcagcctcaaa
gggagctttggagtgatgaggaaggaggctgatgttcagccaacacctgagcagctccta
caggtctatgagctgaccctacactacacgcagcattgggaccataacgtggtcacagct
gccctggagcttctgcagcagatgtttaggacgcctccgccagagcttctgcacatgctc
atcacagtcggcagcgttcctcatgccaccgtgtttcgtcaggacaccgagagccgagca
cgctcagggagcattgttgagctcatctcagggggagggtcttcctgcagtccacttctt
ctcaggaagcagagaggtaagattctttctggagaagaggatgggttggaggacgactcc
gagagagcagaggtccctgctggagccttcacagcggatggatcctctaccactcaggtg
gacattatcacagagcagccccgctcttcccaacgcaccctacagcccggggactctgtg
gacctcagtgcatccttggagcagggcggcggaggcgggacatcccctgaatcaaacaac
gaaaacgaggaggagatgcttagccgaagctccagcggtgccaacgttacaccagagacg
gccgactacacaacaccggaaaacagcactcctgaaggcgggggcccgctagaaggtgtg
gcggcgctaggctctaacgaccgatcacttccacccagtgattcctctcagacgaccaca
gaggggccggactcggctgttacccctacagatgtagcggaactggtcctggatggcagc
gagagccagtactctggcatgcagataggaacactacaggatgaagaagatgaaggagca
gcagcatcctcctcccaggaagaaccatcagagccattcttgcaatcagccctcgccctg
agtaagcctcacctgtttgacggcagaggtcacaatcgccagggatcagacagcagcgtg
gaccgcttcatcccaaaggaagaacctgcagaacccgaacctgataataaaccgtcacgg
attaagggtccgattggacactatacagaccagagggcggagccacttgtgcactgtgtg
cgacttcttgctgcttcctttcttctgacaggccaaaaaaatgggttgatccctgataaa
gaggtgcgagtgagtgtgaaggccttggcggtcagctgtgttggagcagcagcagcgctg
catcctgaagctttctttaactctctctacctggagccactggatggccaaccggttgca
gagcagcagtacgtcagtgacgttctgggtcttattgcacacggagaccctcagatcaga
ggcgccacagccattctctgtggtgccatcatccaagccgcgcttaccaaaacacgttac
aacatacacacttggctggccagtgtgcaaagtgcaacaggtaaccccctgtccctggtg
gatttggtgcctttgcttcaaaaagctttaaaagatgagtcctctgtcacctgcaagatg
gcttgtgctgcagtcaggcactgcatcatgacgctgtgcagcagtacactgagcgagctc
ggcctgcagctggtgatagacctctttgctctgcgggactcttcctactggcttgttcgc
actgagctcctggagactctttctgagttagacttcagattgatcaatttcttggagagg
aaaacggaaactttacacaaaggagatcatcactacactgggcgcctgcggatccaggac
agggtcctaaatgatgtggtcatacatctgttgggagacgacgatcctagagtgcgacac
gtagcagcctctgctgtcagcagactagttccacgattgttctttgactgcgaccaaggc
caggtagacccagtggtggcgattgcacgggaccagagctcagtctacctgcagctactt
atgcatgagacacaacccccctctcagttcacagtcagcacgatcacaaggacatatcgg
ggctacagcttctctaactcagtgtctgacgtcaccttggaaaacaacttgtccagagtt
gttactgcagtctcccatgctttcacatcttctacctccagagcgttaacctttggctgc
tgtgaggccttgtgcctcctggcgtcacattttcctgttggttcttggagcacaggctgg
cactgtggctacgttagctccagcagcaacttttcctctcgctctagcctgagccgcagc
agaggcagaaccctgagcttgtctcagagcagcagtgctccagcctcctcagcacccccc
tcatctgcaggggactctgagcggaggacactgactgtaggagtggccaacatggtgctc
tccttgctgtcttctgcgtggtttcctctggatctctctgcacaccaagatgcacttttg
ctctgtggcaatctgcttgccgcggtggctcctaaatgcttacgcaacccctgggctgga
gaggaggaaggaagttctgggaaccccaacccaggcccaaataaaatagaggaaccctgg
gcggcgctgtcagagcgctccctggtggccatggtggaacagctgttttctcatctgcta
aaggttctcaacatctgcgcccacgtgctggacgacacgccaccaggaccagcagtgaag
gctgcgctgccgtcactgagtaacaccccgtccctcagtcccatccgcaggaaagggaag
gagaaggagacggctgagccaaacactgcccccatgagcccaaagaagagcaacgaaatc
aacacagcaggcaggcaaacggacagcacagcatcagcagcagtgaataaatcgatcacc
ctgggcagcttctaccaccttcctccctacctgaagctctacgatgtactgaaagccaca
catgccaactatagggtgactttggatctttacagtaaccaggagaagtttggaggtttt
ctacatgctgccttggatgttttgtctcaattgctggagctggccacacttcatgacatc
ggaaagtgtgtagaggagatccttggctacctgaagtcctgtttctccagagaaccgacc
atggccacagtttgtgtgcagcagttattgaagacgctgtttgggaccaacctggcttcc
caatatgaaagcgtgctgagcggacccagccgctcccagggcaaagcgctccgccttggc
tcctccagtctgcgccctggcctctaccactactgcttcatggctccgtatacacacttc
acgcaggcgctggctgatgctagcctccgcaacatggtacaggccgaacaggagcaggat
gcctcgggatggtttgacgtgatgcaaaaagcgtccaatcaactgagatctaacattgca
aatgctacacgtcagcggggagacaagaatgccattcacaaccacatccgtctgtttgag
ccgctcgtgatcaaagccttgaagcagtacaccaccagcacctctgtggccctgcagaga
caggtgctggacctgctggcccagctggtgcagctcagagtcaactactgcctgctggac
tcggatcaggtgttcataggcttcgtcctaaagcagtttgagtatattgaagtggggcag
ttcagggattctgaagccatcattcccaacatcttctttttcctggtgctgctgtcttat
gaacgataccactccaagcagattatcagcatcccaaagatcatccagctgtgtgacggc
atcatggcaagcggcaggaaagccgtcacccatgccattcctgccttgcagcccatagtt
tatgacctttttgtgttgagaggctcaaacaaagcagatgcaggcaaagagctggagacc
cagaaggaagtggtggtgtccatgcttctcagacttgtacagtaccatcaggtgctggag
atgtttatccttgttctgcagcagtgtcacaaagaaaacgaggacaagtggaagagactg
tcgaggcagatcgcagatgttatccttcctatgattgcaaagcagcagatgctcctggac
tctccagaggcgttaggtgtgttaaacactctgtttgagactgtggccccctcctctctc
agacctgttgacatgttgctcaagagcatgtttactatccctgtcaccatggcatccgtc
gctactgtccagctgtgggtttccggaatcctggccgtgcttagagtattagtgtcccag
tccactgaggacattgtcctgtcccgggtccatgagctgtctctctctccacacctcctc
tcctgctacacgattcgtcgcctgcatcagcagagcccctcctccagtgacccacccgct
gctgaaacgggctgcaaccaggaagccaacggagacccacagaaggttccacctgaagaa
acctttgcaaggttccttcttcagctagtgggagtgttactggacgatatctccagcaga
cggattaaagtggacatcaccgagcagcagcacaccttttactgccagcagctgggaacg
ttgctcatgtgtctcatacacgtctttaaaagcggaatgtttcgcaggatcacagctgca
gccagtcgtctcctgaagggcgaggccggttcggagaccggtctctactaccctttagaa
ggactcaattgcatgttccagagtctcgtcaccacccatccgcctttggtgctgttgtgg
tgccaggttctcctcattatcaactacacaaactattcatggtggaccgaggttcatcag
acacccagggggcatagcctctcatgctctaagctgttaagtccacattcctctggggaa
ggtgaagaagaaaagccagagtcccggctagcgatggtcaacagggagatcgtacgcagg
ggagccctaattctcttctgtgactatgtgtgtcaaaatctccacgactcggagcatttg
acctggctgatcgtcaaccacgtgcgcgacctaatcagcctttcccatgagcctccagta
caagatttcatcagcgctatccaccgcaactctgctgccagtggtctcttcattcaggcg
atccagtctcgatgtgacaatctcaccactcccaccatgctgaagaagacgttgcagtgt
ttggaaggcatccacctcagtcagtctgggtctcttctcatgctctacgtagacaagcta
ctcaatacgcccttcagggttttggcacgcatggtggatacgctagcatgccgcagagta
gaaatgttgctggccgagacattacagaacagcatagcccagctgcctgtggaggaactg
gagagaatccaggaatacctccagaccagcggattagctcaaaggcatcagaggttctac
tccctgctggacaggttcagagccactgtcgctgacaccagtagcccgaaacctccagtg
acgtcccaccctctggatggggatcctcctataccccctgaaaatgttgctgcagacaag
gagtggtatgttgctctggtgaagtcccagtgctcgcttggtggagatgtttccttactg
gagacaacagaactactcactaaattacctgctgctgatctgctgagtgtcatgagctgc
aaggattttaatcttggtctgttgtgtccatgcctgagtttggggatgcagaggctaacc
cggggtcaggggtctctgttgttggagacagccttgcaggtgaccttagagcagctggct
gcagttactgtgtcacttcctgtcccccaccagcccttcctgccaccacctgaacctcag
acgtactggaaccagctgggggatgtgtacgatgagccgggtttctatcccagggttttg
gcgctgtgcagggctttgtcccagtatttgttgagtgtgaatcagctgccttcatcacta
catattccctctgacaaggagcacctcatcacgtctttcacctgcacggctgcagaggtg
gttgtatggcggctgcttcaggaccacttgccactgagtgtggacctacagtgggctctc
tcctgtctgtgcctggccttgcagcagccctgtgtgtggaacaagctctctaccttcgag
tacaagacacacacctgctccctcatctactgcctacacctcatcatcgctgctgtggct
gtgcatcccggtgagcggctgctgccttcagagaagaaaaaagctcaaggagaaagagac
gatgaagatcagctggactcagcccatcctaacaatgagtgtgagtggcgagcatgtgag
atcatggcagagctggtggaaggactgcagagcgtcctctccttgggtcaccctaaaaac
tctgcatttcccgttttcctcacaccgacgttaagaaacatcatcatcagcatttcacgt
ctgccactggtcaacagctacacaagagtacctccactggtatggaagctgggctggtcc
cctcaggcaggaggagaattcggcactacgctcccagagatccctgtggacttcctacag
gaaaaggatgtcttcagggaattcctgtaccgcatcaacaccttgggctggagcagcagg
actcagtttgaggagacctgggctactctgttaggggtgctggttacccaaccaatcacc
atggaccaagaagaagagacgcaacaagaggaggacctggagcgtacccagttaaatgtg
ttagcagtgcaggctatcaccagcctggtgctgagtgccatgacccttcccactgctggc
aaccctgcggtcagctgtctggaacagcagccccgaaacaaaagccttaaagctctggaa
acacggtttggaaggaaactcgctgtcattcggggggaagttgagcgagagattcagtct
ctagtgtcaaagagggacaatgtcagcacacaccacccataccacgcctgggaccctgta
ccctcactgtcagcagcctctgcagcaggtacgctgatcagccacgagaagctgctgctt
cagatcaacacagaaagggagctgggaaacatggattacaaactggggcaggtctccatc
cattcagtctggttgggtaataacatcactcctcttagggaggaggagtggggtgaggat
gaagaagatgaagcagacacaccggcacctgcctctccccctttatcacctataaattca
aggaagcaccgtgcaggcgtggatattcattcatgttctcagtttctcctggaactctac
agccagtggttgatcccaggctctcccggtaacaggaggacgccgaccatcctcatcagt
gaagtcgtccgatcgctgctggcggtatcggacctgttcacagagaggaaccagtttgac
atgatgttctccactctgatggaactccagaagcttcatccacctgaagacgagatcctg
aatcagtaccttgtgcccgccatctgtaaggctgctgctgtgttaggcatggataaagcg
atagctgagcctgtgtgtcgtctgttggagacgaccctgcggagtactcacctgcccagc
cgcatgggggccctgcacggggtgctctatgtgttagagtgtgacctgctggatgacacg
gccaagcagctcatccccacagtctctgagtaccttctgtcaaacctccgggcgatcgct
cactgtgtgaacctgcataaccagcagcatgtgttggtgatgtgtgctgtggccttctat
atgatggagaactaccctctggatgttggagccgagttcatggctgcagttatacagtta
tgtggcgtgatggtgtcagccagtgaggactccactccctccatcatctatcactgtgtt
ctgcgggggttggagcgcctcctgctgtcagagcagctctcccgcgtcaacggcgaagcc
ctggtcaaactcagcgtggaccgagtcaacatgccgtcccctcaccgagccatggctgct
ctgggcctcatgctcacctgcatgtacactgcggtgctcgcgtcaggttcagatgcgaca
ggggttacaggtcaggttgactgtgctgttgcggaggcggttggcgtcacggcgggtcat
gttggtttctcctcaggcaaggagaaagccagccccgccagccgcccccctcactcagac
ccacaggtcccggacagcgagtcggtcattgttgccatggagagggtctctgtgctcttc
gacaggatcaggaagggtttacccagcgaggctcgggttgtgtccaggattctaccccag
tttctagatgacttctttccgccgcaggacgtaatgaacaaagtcattggagagttcctt
tccaatcagcagccatacccccagtttatggccactgttgtctataaggtattccagacg
ctccatgctacgggccagtcttccatggtgcgtgactgggtgctgctgtctttgtccaac
ttcacacagaggacaccggtcgccatggccatgtggagtctgtcctgcttcttcgtctct
gcttccacctcccagtggatatctgccctccttccacatgtgatcagccggatgggctcc
agtgacgtagtggacgtcaacctgttctgcctggtcgccatggatttctatagacaccag
atcgacgaggagctggaccgcagggcttttcagtctgtctttgagacagtggcctctccg
gggagcccctatcaccagctgctgggctgtctgcagtccatccacctggaagcatcactc
tga
DBGET
integrated database retrieval system
