Cyprinodon tularosa (White Sands pupfish): 119798156
Help
Entry
119798156 CDS
T07496
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119798156 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119798156 (smg7)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119798156 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
119798156 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
119798156
NCBI-ProteinID:
XP_038163449
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MNPCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
RSSQLGIISSKQSGGGGGIITPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
RTKWSVSDFIKAFIKFHGHVYLSKSLDKLDPLREKLEEQFQRLILQKAFSSQQLVHITVI
NLFELHHLRDLTADGGEPGCSGEQQLSWFQLLGLFVSFLGVMCSRVLLDKNRGEELMGEC
PLPAIKLSLDWLKLRSSIFQEAAVENRKYIWPWLVSILNSFQPREEDLSSSSSSSVLPLP
EEFELQGFLALRPALRCLDFTRGHQGILLDREGLPLHARHQRLIALGKWMADNQPGLIRC
RVNEDGLLLFLTDIPEEAIPEPQEKEAPVLQESSNGEQSQNDGGTAGLKSVLSAGKTQSS
WSDSGERPVVTFKENIKPREQSQEPARNLPLKDLGKERRDLCKGNGTAAGTAAAIGKGEP
KRDGKRKSEMKKAGHEKTADVGKQVKAQTELRKTPVSEAKKTPPTQTQTTCSSQFIPIHH
PGAFPPLPSRPGFPPSAYVIPPPVAFPGLQVSPGFTFPAGVSVPAPFLQSAVHGGAGGQA
GKQSHIPYSQQRPSGPGSAGQGPGPLNQVPSQAQQQQPSPQQALQQSVQLQVQALNQQQQ
SPTKPVQQGGMGKSPPHHPGLQQYIQDQTAPMWNQSQAALQKMSPLQMSMKQQQAFFLGG
QDPLKLYEQQLQPQISNMDKKMKFPDVKIQDFYWEPSYRMERTAEGLAMMGDRMKRPPPG
GMCVEQEVPRGPRGAPFEDKSSPFLPPDLLKTLADFEEDEELIFAKPPDFFQALAGPLSS
APGPNIFLPNQSRMESSQEAVGQPSSLLAISGFPVQEFNHSSIFSQAYGKNLPPSSKPDS
PMMQQEPSLYSLFQGNPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHSHGAVPFSN
FGPIGTPDSRDRRVVDRWKAEKPGSGFGLDYLTAAASSSGPEPSWHQGGSTGSSWTNQES
PMDESSSTVLLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRGHGAMNPPH
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgaacccctgcgcccagtatctgcgccaggcggaggccctgaaggctgacatgacagac
tcaaagctgggggcagcagaggtgtggacgtcccgccaggcgctgcaggatctctaccag
aagatgctggtgacggacctggagtacgctctggacaagaaggtggagcaggacctgtgg
aaccacgcctttaagaaccagattaccaccctgcagagccaggccaagaaccgggccaac
cccaaccggagcgaggtccaggccaacctgtcgctgttcctggaggccgccagcggcttc
tacactcagctgctccaggagctctgcaccgtctttaacgtagacctgccctgccgcgtc
cggtcgtctcagctcggcatcatcagcagcaagcagagcggcggcggcggcggcatcatc
acgcctcagcccagctcctgctcctacatctgccagcactgcctggtccacctgggagac
atcgctcgctaccggaaccagaccagccaggcagagtcgtactacagacacgcagcccag
ctggttccatccaacggtcagccctacaaccagctggccatcctggcctcctccaaagga
gaccacctcaccaccatcttctactattgccgcagcatcgccgtcaagttccccttccct
gcagcctccaccaacctgcagaaggctttgtccaaggcgctggaaagccgcgatgaggtc
cgaaccaagtggagcgtctctgatttcatcaaagccttcatcaagttccacggccacgtc
tatctgagcaagagcctggataaactggaccccctgagggagaagctggaggagcagttt
cagaggctgatcctgcagaaagccttcagctcccagcagctggtccacatcaccgtcatc
aacctgttcgagctgcatcacctcagagacctgacggccgacggcggcgagcccggctgc
agcggcgagcagcagctcagctggttccagctgctcggactcttcgtgtccttcctggga
gtgatgtgcagccgggttctgctcgacaagaaccgaggggaggagctgatgggggagtgt
cctctgccggccatcaagctgtccttggattggctcaaactgcggagcagcatcttccag
gaagcggccgtggagaacaggaagtacatctggccgtggctggtgtccatcctcaacagc
ttccagcccagagaggaagacctctcctcctcctcttcctcctcagtgctgccgctgcca
gaggagtttgagctgcagggtttcctggcgctgcgaccggctctcaggtgtttggacttc
accagaggtcaccagggcatccttctggatcgggaggggctgccgctgcacgctcgccac
cagcggctgatcgctctggggaaatggatggccgacaaccagccggggctgatccggtgc
cgagtcaacgaagacgggctcctcctcttcctcaccgacattccagaggaggccatcccg
gagcctcaggagaaggaggccccggtgctgcaggagtcgtccaacggtgagcagagccag
aacgacggcggcactgcgggcctgaagtcggttctgtctgccgggaagacgcagagctcg
tggtcggacagcggcgagcggcccgtcgtcaccttcaaggagaacatcaagcccagagag
cagagccaggagcccgccaggaacctcccactgaaagacctcggcaaggagcgccgcgac
ttatgcaagggcaacgggaccgccgccggcaccgccgccgccatcgggaaaggagagccc
aagagggacgggaagaggaagagcgagatgaagaaggccggccacgagaagacggctgat
gtaggcaaacaggtgaaggctcagacggagctgaggaagactccggtctctgaggccaag
aagactccgcccacccagactcagaccacctgctcgtcccagttcatccccatccatcat
cccggagcgttccccccgctgcccagcagacccggtttccccccctcggcctatgtcatc
cccccccctgtggcgttcccaggcctgcaggtgagtccaggcttcaccttccccgccgga
gtctcggtccccgctcctttcctccagtctgcggtccacggcggggcgggcggccaggct
gggaagcagtcccacattccctacagccagcagagaccgtcggggcccggctcggcgggc
cagggcccggggcccctcaaccaggtgccctcccaggctcagcagcagcagccgtccccc
cagcaggccctgcagcagtcggtgcagctgcaggtccaggccctcaatcagcagcagcag
tcgcccaccaaaccggtgcagcagggggggatgggtaagagcccgccccaccacccgggc
ctgcagcagtacatccaggaccagacggcccccatgtggaaccagtcccaggcggcgctg
cagaagatgtcccccctgcagatgtccatgaagcagcagcaggcgttcttcctggggggc
caggaccccctgaagctgtacgagcagcagctgcagcctcagatctccaacatggacaag
aagatgaagttccctgacgtgaagatccaggacttctactgggagccgtcgtaccggatg
gagcggacggcggaggggctggccatgatgggggacaggatgaagaggcctcctcctggt
gggatgtgtgtggagcaggaggtccctagggggccccgaggagccccattcgaggacaag
agctcgcctttccttcctcctgacctgttaaaaactctagcagactttgaggaggacgag
gagctgatctttgctaagcctcctgatttcttccaggcgctggccggcccccttagctct
gctcctggacccaatatctttctgccaaaccagagcaggatggagagcagccaggaggcg
gtgggccagccgtcgtctctgctggccatcagcggcttcccagtgcaggagtttaaccac
agcagcatcttcagccaggcctacgggaagaacctgccacccagctccaaacccgactct
cccatgatgcaacaggagccctccctctactcgctgttccaggggaacccctggtccccc
tccctccctgccagctcagaccactccaccccagccagccagtccccccactcctccaac
cccagcagcctgccctcctcccctcccacccacagccacggagccgtgcccttctccaac
tttggccccattggaaccccagacagccgagaccggcgggtcgtggaccgctggaaagct
gagaaaccaggaagtggctttggtctggactacctcacagctgcagcgtcctcctcaggc
cctgagcccagttggcaccagggcggttccacagggagttcctggaccaatcaggagtct
ccgatggacgagtcgtcctccactgtgctgcttgacagcctgaagtccatctggtccagc
tccatgatgcagccgggcccgtcggcgctggagcagctccttctgcagcagaagcagaag
cagcagagaggccacggcgccatgaacccgcctcactga
DBGET
integrated database retrieval system
