Cyprinodon tularosa (White Sands pupfish): 119798251
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Entry
119798251 CDS
T07496
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119798251 (sox1b)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119798251 (sox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119798251
NCBI-ProteinID:
XP_038163930
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPSNPGGHAGGGGAGKVPQERIKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLK
KDKYSLAGGLLGSSGVGMGGGQRLESPGAGHVGAGAGYASHVNGWANGTYSGQVAAAAAA
AHAMMQEAQLAYTQHPGSGAHPHHPHHHHPHHHPHNPQPVHRYDMSALSYSPISNSQSYM
SASPPGYGGITGYTHQHQSSGVSPVSGAIGGTLGSLVKSEPSVSPPVSTARAPPPCPTGD
LRDMISMYLPTGEAAGGDSVQSRLHVLHPQHYQSGGPAPVNGTVPLTHI
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggagacggacttgcattcccccgtggtgccccagacaaaccca
tccaacccggggggacatgcgggagggggaggcgcaggaaaggtcccccaggagaggatc
aagagacccatgaatgccttcatggtgtggtccaggggccagaggaggaaaatggcacag
gaaaaccctaagatgcacaactctgagatcagcaagcggctgggagcggagtggaaggtg
atgaccgaggcggagaagagaccttttattgatgaggccaagcggctccgggccatgcac
atgaaggaacacccggactacaagtaccgcccgcggaggaagaccaagacgctactcaag
aaggacaagtactcgcttgccggcggactcctcgggtcatcgggtgtggggatgggcggt
gggcagcgactggagagccccggcgcgggccacgtgggggccggtgcgggctacgcgtcg
catgtgaacggatgggcgaacgggacatactcgggtcaggtggcggcagcggcggcggcg
gctcacgccatgatgcaggaggcgcagctggcttacacccagcacccggggagcggagct
cacccgcaccacccgcatcaccaccacccgcatcaccacccgcacaacccgcagcccgtg
cacaggtatgacatgagcgctttgtcttacagtcccatctcaaactctcagagctacatg
agcgcctctccgccgggatacggcggcatcaccggctacactcaccagcaccagagctcc
ggggtctcccctgtgtccggggccatcggtgggactctgggctctctcgtgaaatcggag
ccgagcgtcagcccgccggtttccacggcgcgcgccccgccgccatgcccgactggagac
ctgcgggacatgatcagcatgtacctgcccaccggtgaggcggcgggcggcgactccgtg
caaagcagactgcatgtgcttcacccgcagcactaccagagcgggggccccgcgccggtc
aacgggacggtccccctcacgcacatttaa
DBGET
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