Cyprinodon tularosa (White Sands pupfish): 119798258
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Entry
119798258 CDS
T07496
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119798258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctul02000
]
119798258
03037 Cilium and associated proteins [BR:
ctul03037
]
119798258
Transporters [BR:
ctul02000
]
Other transporters
Pores ion channels [TC:
1
]
119798258
Cilium and associated proteins [BR:
ctul03037
]
Other cilia and associated proteins
Stereociliary proteins
119798258
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
119798258
NCBI-ProteinID:
XP_038163554
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MGMEGSPAAPPVAAADEEEEQQTPAAGLSQSELRGGAVSMSSASEPVAPSSRSLSAARRH
RSVRKNSRRLYSAYQQGSSEEEADKEVDSNDPEEMFQNIQYQKEIIANICSRPWPMRRKL
KVLKQAREIVLKYEGQLTRTRGYQTAGADLLKKLYRLLYNVVVTFIPWEVRIKKIESHFG
SGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGASFGTTRSKTIPKEHLASAQDLDT
IWSLGGYLQYSVLFYGYYGSVRKIGSAGYRLPLAYFLVGMAVFAYSFIILLRKMAKNSRL
SLASASDENFTFCWRVFCAWDYLIGNPEAAECKGAAIVNNIREAIVEEQEKKKDTSLAVL
ISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQEKPELTLWEKNEVSVVVSLITMIAPS
AFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLIIALLDKVNIMSSAPQLSSNNWTDS
SSTTTSLSAPVSRISSSEHLNSTMATITTAINFIHNRSVSVTASNQSSPFEKTVRSQDQC
WETYVGQEMLKLSIIDMIFTVASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAE
NVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNF
YLAMLLFMLFLCMLPTIFAIVRYRPSEHCGPFSGQEKIYDIISDTVASDFPLWFSKVMSY
VTSPVVVLPAVLLLFMLIYYLQAIARSLKFTNNQLRMQLQTERTEDKKKVFQLAAARLQA
PEASADKKPDQQETDVQSQEASIHTSSPGQNGSVTNVQSPVHRSNSIRTITQSASRAELN
PGQVAGSVRSPAAVLLPKRQVELLCNRPPHFISGPSGSCRSKSCHHMASNPPAACSGTMH
TDPLYRKTVRSLHPVEAAGIIAAQSYGGRRGHTTRYVIVNEHRPRKKLLCSATRIPRHYL
MEEPTEILELYPRNMKHFTPRTVHPHRSHTTQQLLKDQEEPGKGRKRTSLGKSHRPRPLS
EHQQQAHFYIGERLESFRGSHAARYGMQDDIEAVDGREEVDWEDGPGSPSPAGVGETDMQ
RRPVLSAGRQSQSPVRIRAVRSHLKPKLRSQLENPLTESDSASVASSSDQQNSSTDQYIQ
VIHSKERHLGSDIRQEKLSKKKTNLDLNGSDSQDLVCSNV
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgggaatggaggggtctcctgctgcgcctcctgttgctgctgctgatgaggaggaggag
cagcagacaccagcagcaggtctctcccagtcggagctcagaggaggcgccgtcagcatg
agctcagcatctgaacctgtggctcccagcagcaggtccctgtctgctgccaggagacat
cggagcgtccggaagaactccaggaggctttactctgcttaccagcagggctcctcagag
gaagaggctgataaggaggtggacagcaacgacccagaagaaatgttccagaacattcag
taccagaaagagatcatcgcaaacatttgctccaggccctggccaatgagacggaagctc
aaagttctgaagcaagcccgagagattgtcctgaagtacgaaggccagctgacaagaacc
agaggctatcagacggctggagctgatctgctgaaaaaactctacaggctgctttataac
gttgtcgttacattcattccatgggaagtcaggatcaagaaaattgaaagtcactttggg
tctggtgtggcctcctatttcatctttctccgctggttgtttgggataaacatcgtcctg
accatcatgacaggagcctttgtggtccttccagagctgctggccggagcttcgtttgga
acaacaagaagtaaaactattcccaaggagcatctagcatcagcccaggacttggacacc
atctggtctctagggggctacctgcagtactccgtcttattctatggttattacggcagc
gtgaggaagatcggcagcgccggctaccggctgccgctggcatacttccttgttgggatg
gctgtattcgcctacagcttcatcattttgttacgcaaaatggcgaagaattcgcgcctg
agtctggccagcgcatctgatgaaaacttcaccttctgttggagagttttctgtgcctgg
gactacctgataggaaaccctgaggctgcagagtgcaaaggagctgcaatcgtgaacaac
atcagggaagcaatcgttgaagagcaggagaagaagaaggataccagcctggctgttctc
atcagtctgcgtattttagccaatatcctggttctgctgtcgctcgctgggagcatctac
atcatctattttgtggtagaccgatctcagaaactggagcaggagaagccggagctgaca
ctgtgggagaagaatgaggtgagcgtggtggtttccctcatcacaatgattgctccttct
gcatttgagctggttgcccagctggagatgtaccacccgaggacctctctgcggttccag
ctggccagagtccttgttctataccttgggaatctctacagcctcatcattgctcttctg
gataaagtcaacattatgagttcagctccccagttgagctctaataactggactgacagc
agctccaccacaaccagcctttctgccccagtatcaaggatctcctcatctgagcatctc
aacagtaccatggcaaccatcacaacggctatcaacttcatccacaacagaagcgtctct
gtgacagcatctaatcagagctctccctttgagaagaccgtccgctcccaggaccagtgc
tgggagacctatgttggacaggagatgttgaagctttctatcattgacatgatcttcaca
gtagccagcatcttactcattgacttcatcagaggtctggtcgttcgctacctgagtgac
tgctgctgctgggacttggagagcaagtttccagagtacggagaatttaaaatagctgaa
aatgtcctgcacttgatttacaaccaagggatgatctggatgggagccttcttctctcca
tgtctgcctgccttcaatgtgctgaagctgattggtctgatgtatctgaggagctgggct
gtgctcacctgtaatgttcctcaccagcaggtgttcagagcttccaggtccaataatttc
tacctggctatgctgctgttcatgctcttcctgtgcatgcttcccaccatctttgccatc
gtgcgctacagaccttctgagcactgtggaccattcagtggtcaagaaaagatttatgac
atcatctcagacacggtggcctccgacttcccgctgtggttcagtaaagtgatgagttac
gtcaccagcccggtggtggtcctgcctgcagtgctgctcttatttatgctgatatattat
ctccaagccatcgccagatccctaaaattcaccaacaaccagctgaggatgcagctccag
actgagcggacggaggacaagaagaaagtttttcagttggctgcagcgaggctacaagct
ccagaggcttcagctgacaagaagccagatcagcaggagacggatgtccaaagccaggaa
gcctccatacacacttcgtctccagggcagaatggcagcgttacaaacgtccagtctcct
gtccaccgtagcaacagcatccgtaccatcacccaatcagcttctagggcggagcttaac
cccggacaggtggctggatcagtccgaagtccagctgcggtcctactgcccaaacgccag
gtggagctcctatgtaacaggccaccacatttcatcagtggcccaagtggttcctgtaga
tccaagtcctgccaccacatggcatccaacccgccggctgcttgttctggcaccatgcac
accgacccgttgtacaggaagaccgtacgctctctacaccctgtggaggctgctgggatt
atcgctgcacaaagctacgggggtcgtcgcggtcacaccacccgctatgttatcgtcaat
gagcaccgaccccggaagaagctgctgtgctccgccacacggatcccgaggcactacctg
atggaggagcccacagagatcctggagctgtacccacgcaacatgaagcacttcacgcct
cgcactgtccacccccaccgctcgcacacgacgcagcagcttcttaaggaccaggaggaa
cctgggaaaggcagaaaaaggacctcgttaggcaaaagccatcggccccgccctctgtcg
gagcaccagcaacaagcacacttctacattggggagaggttagagagcttcagaggaagc
catgccgcgagatacggaatgcaggacgacattgaagcggtggatggtagggaggaggtg
gactgggaggatggcccgggttctccttctccggccggcgttggagaaactgacatgcag
aggcgtcctgttctatctgcagggaggcagagtcagtcccccgtcagaatcagagctgtg
aggtctcacctgaagcccaagttaaggagccagctggagaatcctctaactgaatcggac
tcagcctctgtggcttccagcagcgaccagcagaacagcagcacagaccagtacatccaa
gtcatccacagcaaggagcgccacctaggctctgacatcaggcaggagaagctgtccaag
aagaagaccaacctggatctgaacggcagtgactctcaggatttagtctgctccaatgtc
tga
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integrated database retrieval system
