Cyprinodon tularosa (White Sands pupfish): 119798426
Help
Entry
119798426 CDS
T07496
Name
(RefSeq) highly reducing polyketide synthase cm3B-like
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
adh_short
PP-binding
CurL-like_PKS_C
ACP_SdgA_C
PKS_DH_N
Thiolase_N
ADH_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
119798426
NCBI-ProteinID:
XP_038163831
LinkDB
All DBs
Position
Unknown
AA seq
2071 aa
AA seq
DB search
MEDTDGDVAVIGIGCNFPGGEGLDNFWKVLKEGRNCVVDIPADRFDGTFWQDSDVNKPGK
SQTAKAALIEGFNEFDARFFGIPEVEADNMDPQQKLLLQCTFRALEDAGLSMESISGSRT
GVYIGLMNRDYEMIRNNNPATISHYNATGTSMSVAANRISFIFNLTGPSLAIDSACSSSL
VALHVACQAIKQGDCEMALCGGVNCIIEPRVFVALSKARMISPEGTSKPFSIRADGYGRG
EGCGVVLLKPLKKALKENNKIWGVILKTAVNQDGHSVTPITKPSVTQQEELLRTIYSDSD
IKNVQYIEAHGTGTPVGDPTEAESLSNVIAQTRPPGAEMLRIGSVKGNIGHTESAAGIAG
LIKVLLMMKHQTIVPSVFYSGDSSSVDTKTLKLKIPKEIERWDANQPSGRVAGVNSFGFG
GTNAHVILRDDNHQVVPTKAWQKLFVLSAASEKSLILTTIDTYQRLCSSPMLDFHAISYT
SACGRSHFKHKYRKAFLTSSPSNLQQQLKSAQKTEVQSVQSNLQVVFVFCGNGVCYKGMC
RQLMEQVPAFKEKIKEVEFAFQKHTPIRISELLECEFQDIDISQPSIIQPILFAIQVGIA
TLLKHWGIKPKAMLGHSVGEVAAAHCSGLLSLDDAVKVLHHRSTFQSSVTGGKMLVVSNI
AVERILEMIPDFVGKICVAAFNSPQSCTLSGDADSVDDLHERLRFKFADKNVFLHILDVP
AAYHSHMMEPVLDNIERSIGLLNTGSMDCQLFSTVSGERFSNGDFSSGAYWAKNIREPVL
FKKTLLSVLKEKQAKENVVFVEVGPRIALQRYIYETLGDETKVLPSVHRKKDCESISSTL
TQLFELGINILWEEVFRGCETIPSTVPVYQFDNTKSEVNFEVLRGGNEHSSFFCNGFEFQ
IKQDNKEFSYELSLKTVPYLWEHKNNNVAVVPGAFYVDLAYALVIANLKPKKPVSLLNLG
IKFESVLTLNSNSRKLTMMLEQSETEAMFKIQSSVATHASGTCRYNNQTPILEEETICLD
VIHQRCQLVLTRQEIYSVLYQAGFEYGPLFKHLDDVCFGKKYKEAVTTFQVPGELWTSLH
DHYIHPVLLDYFIQMAAVVAMGQHGAKKGFPSQIASVAISEPLQETMTMYLCIAQQTEDF
LEVCGCFATTEGKVLVEFKGVRITFLSPHPEVSQSLFFHNETDKLAKQVDVEGFGIKAII
FEDQLGIGKGLKPYISPDSVFVGIRKTLRPFEVKNLVFQSLNSDFHLNTVLFIWGVENLT
HLSSEKILERFVTCCEVFRQIVLAVKESKRLCTLKVITYRATEMTVDHVSPGFVLSGIMR
SCSAEIADIHFQHIDLASGTEEDIQTLVHVIKANHQHEIRISKGQASTTRIVQTPVKDCD
LCVEPIKASQLRDFVLQTTDPYRTTNLYPISTINTDRNPVPESSVKIQVNNVCVHTSDYF
PVSTSHFKFGRTFYWNKYVAQNHDLLALDFSGIVSTVGRDVKTLRVGDHIASCYPVPAAS
EILIPEAVCYSTKALPFFRETPCVSYFILAWEILQRLLCEVRRRQKKLAIISSDSAAVLI
QVLAVTANRSGWAVSCQANISKELIHFDALLFLPPFDQSIERIFDIGDPVKHVIFVFSSH
MSPSTNNVTFKDKNIHVHHLDVAYVLQKANLQAQTRNVSKWLQSLGLDADCLRYRKELFH
EKEAKTESSFTTATVQNIIINKERFKGLICSQSSLPMKPALFKKGCVYIVTGGLSGLGFE
TVKFIAQNGGGCIAILSRGVPSDEIRFQLDLLQKINGVTVLNIQCDVSVSMQVVDAISKI
GKRFPSNPIKGVFHSAAVLHDALIESLDESLFRKVLKPKVCGALNLHFATFHNKLDFFVC
YSSISSFIGNASQCNYAAANSFLDTFCHYRRNLGLAGQSINWGPLNLGLLLHKDHFQKFL
EAKGMMTMAVHEVHETLKKCLLINRPQQVICKFNFKNLSSHVLSQNPSLRERMGALVETA
LTDEILERPNKVQRSFTTYDTVRIIVSEMLNLNVGKVEDDSSLSALGIDSMLAMTLQNKI
YQETEINVPLITILDPNTTLDTLVSFVQNHI
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacagatggagatgtagctgttatcggaataggatgtaatttcccaggaggt
gaagggctggataatttctggaaggtcttaaaggagggaaggaactgtgtggtggatatt
ccagctgataggttcgatgggaccttctggcaggactcggacgtcaacaagcctggaaag
agccaaacagcaaaagcagctcttatagaggggtttaacgagtttgatgccagatttttt
gggatccctgaagtagaagcagacaacatggatcctcaacagaagcttctcctgcagtgc
acattcagggccttagaggatgcagggttatcgatggagagcatcagtggaagcagaact
ggcgtttacattggtttgatgaacagagactatgagatgatcagaaataacaatccagcg
acgataagccactacaatgccacggggacatccatgagtgttgcagcaaacaggatttcc
ttcatctttaacctcaccggcccttccctggctattgatagtgcctgttcctcctcactg
gtggctttgcatgtagcctgtcaggccataaagcaaggagactgtgagatggccctctgt
gggggagtcaactgtataatagagcccagagtgtttgttgctctcagcaaagcaaggatg
atctcacctgagggaaccagtaaacctttctccatcagagcagacggctatggaagagga
gaaggctgtggtgttgtgctcctaaagcctctaaaaaaggccttaaaagaaaacaacaaa
atatggggtgtgatcttaaagactgcagttaaccaagacggacattcagtgactcctatc
accaaaccctcagtgacacaacaagaggagttgctcagaacaatatactctgacagtgac
ataaaaaatgtccaatacatcgaagctcatgggactgggactccagttggtgacccaaca
gaggcagaaagcctctcaaatgttattgcccaaaccagacctccaggcgctgagatgctg
cggataggctcggtgaagggcaacataggacacactgagtctgcagctgggatcgctgga
ttgatcaaggtactcctaatgatgaagcaccaaactattgttccctcagttttctactct
ggtgacagttcaagtgtagatacaaaaactcttaagttaaaaattccaaaggaaatagaa
agatgggatgcaaatcaaccatcgggaagggtagctggggtcaacagttttgggtttggg
ggaacaaatgcacatgtcatcttaagagatgataatcatcaagtagttcccacaaaggct
tggcagaaactctttgttttgtcagctgcttctgagaaatcactgatactgaccacaatt
gacacctaccaaagactgtgcagtagtcctatgcttgacttccatgcaatttcgtacacc
tcagcatgtgggaggagtcacttcaaacacaaatatcgaaaagcctttttaacatcttcc
ccctcaaatttacaacaacagctaaaatctgcacaaaaaacagaggtacaatcggtacag
tctaacctccaggtggtctttgtattttgtggaaatggggtttgttacaaaggtatgtgc
aggcagctcatggagcaagttcctgctttcaaagagaagatcaaagaagttgaatttgcc
tttcagaaacacactcccatcagaatcagcgaattgcttgagtgtgaatttcaggatatt
gatattagtcagcctagtattatccagcctattctttttgcaattcaagttgggattgcg
actctgctgaagcactggggtattaaacccaaggccatgcttggccactctgttggagag
gtcgctgcagctcactgttcaggtcttttgtctcttgacgatgcagtgaaagtgttgcac
catcgcagtacttttcagagttctgtcacaggaggaaaaatgcttgttgtcagcaatata
gctgtagaaaggatcttagaaatgataccagactttgttggaaagatctgtgttgctgct
ttcaacagccctcagtcatgcactttgtcaggagatgcagattcagttgatgacctccat
gagaggctgaggttcaaatttgcagataaaaatgtgttccttcacatcttggatgtccct
gctgcttaccatagccatatgatggaaccagttctagacaatattgaaaggagcataggt
cttttgaatactggaagcatggactgtcaattattttccacagtttctggagagagattt
tcaaatggtgatttcagttctggtgcctactgggcaaagaacattagggagcctgtttta
ttcaagaaaactcttttgtctgtcctaaaggagaaacaggctaaagaaaatgtggtcttt
gttgaagtaggtcctcgaatagctctccagaggtacatatatgaaactcttggagatgaa
acaaaggttctcccctctgtccaccgaaagaaagactgtgagtctatctcctcgactctg
acgcaactgtttgaacttggcattaacatactctgggaggaggtctttaggggttgcgag
acaatacctagtactgtaccagtctaccagtttgacaacacaaagagcgaagtgaatttt
gaagtcttgagaggaggtaatgaacactcttcttttttttgcaatggatttgagttccaa
ataaagcaggacaacaaagaattctcatatgaactttctttgaagactgtgccctatctt
tgggagcacaaaaacaacaacgttgcagttgtcccaggggcattttatgttgacttagcc
tatgccttggtgatagcaaacctgaagccaaagaagcctgtctcactgctcaatctaggt
ataaaatttgagagtgttcttactctaaactcaaattccaggaagctgacgatgatgctt
gagcaatcagaaacagaggccatgtttaaaatacagtcgtcggttgctacacacgcctct
ggcacatgcaggtacaacaatcaaacaccaattttagaggaagaaaccatttgtcttgat
gtgattcaccaaaggtgccaattggttctgacacgacaggaaatatattcagttctctat
caagctggatttgaatatgggccactttttaagcatttggatgatgtttgttttgggaag
aaatacaaggaagctgtgactacttttcaggttcctggtgaactttggacaagtctccat
gatcattacattcaccctgtgctgctggattattttatccaaatggctgcagtggtagca
atgggacaacatggagccaagaagggatttccatcacaaatcgcaagtgttgctatatca
gaacccctgcaggagacaatgaccatgtacctttgtatagcccaacaaactgaagatttc
cttgaggtttgtggatgctttgcaaccacagaggggaaggttttagtagaatttaagggt
gtaagaattacatttttgtcccctcatccagaagtctctcagtcattgttttttcacaat
gaaacagataaattggcaaaacaggtagatgttgaaggctttggaataaaagcaattatt
tttgaagatcaacttggcattggtaaaggactaaaaccttacataagccctgattcagtg
tttgtagggatcagaaagacgttaagaccttttgaagttaaaaaccttgtgtttcaatca
ctgaatagcgatttccatttgaacacagttctcttcatttggggtgtggagaaccttact
catttgtcctccgaaaagatcctggagagatttgtgacttgttgtgaggtatttcgtcag
attgttttggctgtcaaagagagcaaacgtttgtgtaccctcaaggtcatcacatacaga
gccacagaaatgacagtagaccatgttagtcctggttttgtcctctctggcataatgagg
tcctgctcagctgagattgcagatattcatttccagcatattgatctggcttcagggaca
gaggaagacatccaaaccctggttcatgtaattaaagctaaccatcaacacgaaataagg
atcagcaaagggcaggcatcaacaacgagaatagttcaaactcctgttaaagactgtgac
ttatgtgtagagccaataaaagccagccagcttagagactttgtcctacagactactgat
ccatatcgaacaaccaatttgtatccaatatctaccattaacaccgatagaaatcctgtc
ccggaaagttcagtaaaaattcaagtaaataatgtctgtgtgcacacctcagactacttt
ccagtcagtacttcccatttcaaatttggcagaacattctactggaacaaatatgtggca
cagaatcatgacctcctggctttagattttagtggtattgtctcaaccgttggtagagac
gtaaaaacactaagagtgggagaccatattgcttcatgttatccagttcctgcagcatca
gagatcttgattcccgaagcagtgtgctacagtacaaaagctctgcccttcttccgagaa
acaccatgcgtatcctatttcatcctggcatgggaaatcctgcagaggctgctgtgtgaa
gttaggagaaggcagaaaaagttggcaataatctcctctgattcagccgctgtcctaata
caagttcttgccgttacagcaaacaggtcaggctgggccgtttcctgtcaagctaatatc
tctaaggaattgattcattttgatgctttgctttttcttcctccatttgatcaatcaatt
gaaagaatattcgacattggtgaccctgtaaagcatgtaatttttgtctttagcagtcac
atgtcaccctccacaaacaatgttacatttaaggataaaaacattcatgtgcaccatctt
gatgtggcttatgttctccagaaagctaatctacaagcacaaaccagaaatgtctccaag
tggcttcagtcgctaggccttgatgcagattgtcttcgttatagaaaggagctatttcat
gaaaaagaggctaaaactgagtcctctttcacaacagcaacagtacagaatatcattatc
aacaaagaacgattcaaggggctgatatgtagtcaaagctctttgcctatgaaacctgca
ctttttaaaaagggatgtgtttacattgtaactggaggtttgtctggtttgggctttgag
acggttaagttcatcgcacaaaatggtggaggctgcattgcaatactgtcaagaggtgtt
ccgtcagatgaaattcgctttcagttagatcttctccagaaaataaacggggtcactgtc
cttaacatccagtgtgatgtctctgtgtcaatgcaggtggtggatgccatcagcaaaatt
ggaaaaagatttccatctaatccaattaaaggagtgtttcatagtgctgcagtcctgcat
gatgcactcattgaatctcttgatgagtctcttttcagaaaagtgctaaaacccaaagtt
tgtggtgctctgaatctccactttgcaacattccacaacaagttagacttctttgtttgc
tactcctccatctcatccttcataggaaatgcctcacagtgtaactatgcagcagccaat
tcctttcttgatacattctgtcattaccggagaaaccttgggctcgctggacagtccatc
aactggggtcctttaaaccttggtctgctacttcacaaagaccactttcagaagttcttg
gaggccaaggggatgatgacgatggctgtgcatgaagttcacgagacacttaaaaagtgt
ctgttaattaacaggccacagcaagtaatttgcaaattcaacttcaagaacctcagctca
catgtcctttcacaaaatccgtctctcagagagcgaatgggagctttagtggaaacagca
ctgacagatgaaatccttgaaagacctaataaagttcagcgatcatttacaacttatgac
acagtaaggataatagtcagtgaaatgctgaatttaaatgttggcaaagtggaagatgac
tcctctctttcagcactgggcattgattcaatgttagcaatgactttgcagaataaaatc
taccaggagacagaaataaatgtacctttgattacaatcctagaccccaacaccacactt
gacactttagtcagttttgtacaaaaccacatttaa
DBGET
integrated database retrieval system
