Cyprinodon tularosa (White Sands pupfish): 119798542
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Entry
119798542 CDS
T07496
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
119798542
Domain-containing proteins not elsewhere classified [BR:
ctul04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
119798542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
119798542
NCBI-ProteinID:
XP_038163985
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MASPAADFGQSHQHPPVTQSAADSAFLEAQKWIEAATGRCFGEKDFRGGLENGILLCELL
SSIRPGLVKKINRLQTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPAAKGSD
GSRRLKNVLITIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKEAETVESPQRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSQQTPSPDVLVPRGSSDDHGSDSESDG
TPNRKMPDLHKDDMLARRTSVTELRTAMPFNQYLPNRSNQSGYVPAPLRKKKNDKEDGGR
QTCSTATSPVGGDRPCSPKESPVLVLPLRESHSPSPTPHIEPQIQENKSEDDERDVKLSA
SSPCIVIHAVGIRRSSEPLRCGLYQANSEPPRETITQLKGTSEQSASTRSCSEDFSQYFA
TLSPNTTTSARKRQTTVDQQVAGVAGADGDDKWICQMLTSPKYAPSSSDFLPVPTAMATT
LARATDAGRTKERSKREEPREEKSCSDRIPPRTSVSMNDMRGEEEAPHSHVRHERMHNQY
NRMREDENHWQEDLARWKSRRRSVSQDLIKKEEERKMMERLMSGDGYISQRRKSIKTYRE
IVEEKERREEELREAYRKARTPEEASAVLQRYAQRFSISEAVLERLQLPKLLDRSVSADP
SFHISPLSLSLSSSPTTPDPFDEDPSGPLRYLRQQSAPLPRFTSTLEAQIEEFPKDSTSL
HRPQIRSCSSEPPSTRALSPKPVPLLSPKPYFQPQQLASEKQSSKVDGLLRVNGDIGNNS
ESKARESPPLFLPSPSLSGNGTLDAPSSDASPARCLPATPERRSQGSTKDTDRPYNTAAE
DFKEENVTECLSSPIRPTTLPEELRQPEDSFGEAGGQTDAAQQEEKTYPAVHQQSTTAKP
EKTELSSENLQQIFPTEVDTIKNKAIASMGSFQRMEMAPPSAAPGSLGYIPQKEVSSDDS
KKNQHGNVSVPVLSQTRRGDRWSWDPDEERKRQERWQQEQERMLQEKYQREQEKLKEEWE
KAQREVVEEERKYNEEERKILEETVMPLTPRSSALPSPSRGGLSSTSEPEDTIVRSLADW
ERKQELLERQSRGSTESAERKMRENDRTSDISTADDSMNTGRSMVSQSSSQAEKLAQSIP
KSQTLPTTSAKCSTPDKKQSAPATDSTRPSRSAGERRCSPTDNDKGRGSSKPIASCPSEP
DTLPPPPNRSVSGRKLCSSCGQPLGKGAAMIIETLSLYFHIHCFKCGVCKGQLGDTTTGT
DVRIRNGLLNCNQCYIRSRSAGQPTTL
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggccagtccggctgcagattttggacagtctcatcagcatccccctgtcacacagtcg
gccgccgactctgcgtttctggaggcgcagaaatggatagaggctgcgactggacggtgt
tttggtgaaaaggatttccgaggaggcttggagaacgggattctactgtgcgagttactg
agctccattagacctgggttggtaaagaaaattaaccgactgcaaacaccaatagctggc
ctggacaacctgagtgtttttctgcgaggctgtgaggagttaggactgaaaggctcccag
ctgtttgaccctggagacctgcaggacacatcgacacgtcctgctgcaaagggaagcgac
ggcagccgaagactcaagaatgttttaatcacaatctactggctcggtcgtgctgccaac
agctgcacctcctacaacgggcccacgctggacctaaaagagtttgagggcttgctgtca
caaatgcgaaaggaggcagagacagtagaaagtcctcaacgcagcattcgggacagcggc
tacattgactgctgggactcggaacgcagtgactcactctctccgccacgccacggacga
gaagattcattcgacagcctggactccttcggctcgcgctcgcagcagactccgtcaccg
gacgtcctggtcccacgcggcagcagtgatgaccatggcagtgactcagagtccgacggc
acacctaacaggaagatgccggaccttcacaaggacgacatgttggcgcgtcgcacatca
gtcacagagctgcggactgccatgccttttaaccagtacctacccaacaggagcaaccag
agcggatatgttccagctccacttcgcaaaaaaaagaatgacaaggaagatggagggcgc
cagacctgcagtactgcaacctcacctgtaggaggagacagaccttgtagtccaaaagaa
agccctgtcttagtcctcccacttagagagtcccatagcccttctcccactccacacatt
gaaccacagattcaagagaacaagagcgaagacgatgagagggatgtaaagctgagtgct
tcctcaccttgcattgtgatccatgctgtgggaataagaaggagcagtgagcctctacga
tgtggcctctaccaggccaactcggagccccctagggaaaccatcactcagctaaagggc
acctctgaacaaagtgcttcaactcgctcgtgctcagaggacttctcccaatacttcgcg
actctctcaccaaacaccaccacttctgccaggaaacgtcagaccacagtagaccagcag
gttgcaggagttgcaggtgcagatggggatgataaatggatctgtcaaatgctgacctca
cccaaatatgctcccagttcctctgatttccttcctgtgcccactgccatggcaaccact
ttagcaagagcaactgatgcaggcagaacgaaggaaaggagtaaaagagaagaaccaagg
gaggagaaatcttgttcggaccgtattcctccaagaacgagtgtgagtatgaatgacatg
cgtggtgaagaggaggcgccacatagtcacgtccgtcatgagcggatgcacaaccagtac
aacagaatgagagaagacgagaatcactggcaggaggacctggcccgatggaaaagtaga
aggaggagtgtctctcaggacctgattaagaaagaggaggagaggaaaatgatggagcga
ctgatgtcaggagacggatatatctctcaaaggagaaaaagcatcaaaacttaccgagaa
attgtggaagagaaggaacgtcgtgaagaggagctacgagaggcttacaggaaagccaga
actccagaggaggcatctgctgttctccaacgttacgcccaacgtttctccatcagcgag
gccgtcctggagcgcctgcagctgcccaagcttctagaccgcagcgtatcagctgatccc
tcctttcacatctcgcccctttccctctcgctctcctcctcccctacaaccccagacccc
ttcgacgaagaccccagcgggcccctgaggtatctgcggcagcagtcagctccactgcca
aggtttacatccacgctggaggcacaaattgaagagtttcccaaagattcaacctcactt
catcggcctcagattcgctcttgctcatctgaaccgccatccacccgagccctgtcaccc
aaacccgtgcctttgctgtcacccaagccttactttcaacctcaacagttggcatctgaa
aagcagagtagtaaggtggatggtttgctacgagtgaatggcgacattggaaataattct
gagtctaaagcaagggaatcccctcccctattcctgccatctccatccctgtctggaaat
ggcactttggatgctccctcatcagatgcctcacctgctcgatgtctgccagccaccccc
gaaagacgaagtcaagggtcaacaaaggacaccgaccgaccgtacaacacagctgcagaa
gattttaaagaggagaatgtcactgagtgtttatcatctcccattcggcctactactctt
ccagaggagttaaggcagcctgaggacagctttggggaggcaggaggtcagacagatgct
gctcaacaggaagaaaagacctatccagcagttcatcagcagtcaactacagctaaacca
gagaagactgaactttccagtgagaacctacagcagatttttccaactgaggttgataca
ataaaaaataaggctatagcatcaatggggtcttttcagagaatggagatggcaccgccc
tcagctgcacccggatcgcttggatatatacctcaaaaagaagtatcatcagacgattcc
aagaagaatcaacatggaaacgtctcagtcccggtgttgtcccagaccaggcggggagac
cgctggtcttgggacccagatgaggagcgaaagcgtcaggaaaggtggcagcaagagcag
gagcgcatgctgcaggagaagtaccagcgtgagcaggagaaactgaaggaggagtgggag
aaagcacagagggaggtggtggaggaagaaaggaagtataatgaggaggagcgtaagata
ctggaagaaactgtaatgcctttaacaccccgctcctcagccctgccctcccccagccga
gggggcctctcctccacctctgagccagaggacacgattgtccgttcgctggcagattgg
gaacgaaaacaagagctactggagaggcagtctagaggaagcactgagagtgcagagagg
aaaatgagagaaaacgacagaactagtgacatcagcactgctgacgacagcatgaatact
ggcagaagcatggtgagccagagcagcagtcaggcagaaaaacttgctcaaagtattccc
aaaagccaaacgcttcctactacatcagccaaatgctcaacgccagataagaagcaatca
gctcccgctaccgatagcaccagacccagtcggtcagcaggagagagaaggtgcagcccc
actgataatgataaaggacgcggctcatcaaagcccatcgcatcatgtccatcagaacca
gacacattacccccaccgcccaacaggtctgtcagtgggaggaagctatgctccagctgc
ggacagcctctaggaaagggagcagccatgatcatagagacactaagcctctactttcac
atccactgcttcaagtgcggggtgtgtaaaggacagttaggcgacacaaccacagggaca
gatgtccggataagaaatggcctcctcaactgcaaccaatgctacatccgttcccgatcc
gctggacagccgaccacattgtga
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integrated database retrieval system
