KEGG   Cyprinodon tularosa (White Sands pupfish): 119798572
Entry
119798572         CDS       T07496                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctul03019]
    119798572 (atxn2)
Messenger RNA biogenesis [BR:ctul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119798572 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 119798572
NCBI-ProteinID: XP_038164028
LinkDB
Position
Unknown
AA seq 1127 aa
MSMKAGGNRGKPGGGNAAGAAASGAGGSGGGRQNLGRGRHSGKGPAAVIFNGVYANMRMV
HVLTSVVGTKCELKVKNGAAYEGVFKTYGPECDLVLDAAHRNSPESNIGPRKEDIVESII
FKASDVVVVTFKDVDLNFARKVSADADNFTDAAVSGRINGEHKEKDLEPWDGGDTHNSDS
LESLDTDVSNGWDPNDMFKYNEEKYGVLSTYDSSLSTYTVPLERDDSEEFQKREARAAQL
AEEIEASSTYKARVALENDERSEEEKYTAVVRGERETHMLSRENKYIPPGQRNREAMSWG
AGRQNSTRLGQSSAGASASRPGPHDYSPNSDQRVVNGGSSHWPSPCPSPSSRPPSRYQSG
SSYLPPRATSPARPPSRPPSRPSRPSSHSSHPSYPSSSSSFPQHGPTSIASTLPKRMSSE
GPPRMSPKSQRTPRAHRVPPSRISSVSTGVDLASHNPPVEVSATPPTRSSSSGGTWSSVV
SGAHRPRSPRQNNVGRASPGSSSLSSPLQAAPVESVTSLTSASTAAASPAPNTAASSLGD
AKECRVQETRQSSPSANNENMKPLDNSPSITRPLCKGPPSMATDHRKQIDNLKRFSVDFR
LQPSSNPDSALDQIMTKTIRDPSDKPKDLTLDKASAAGRDGTEEGVAALAAGNSGAGPAS
STSATISSKPGSPAAPSPSPLAPDQKRGGQDVTSQGVQTTPTSTLSGSKHEEKEEKKEAV
QDQVRKSTLNPNANEFKPRFNTQPKPANTPTPPRPQGQPSPSIVVQQPPTVYGCFPQMYP
LTPVSPGVQKSIIWKSPAVYQVQMPHMAVSQSKPYRPGKVPNMPQQRSDQHHPPGTPTMM
HPATAAGPPIVAQNPAYSAQYFTCSPQQFTSQPLVQQMPHYQSQAQHMFSPVMQGSARMM
GPPTHGQPGLVSSSTPQYAEQTHTMYVSQGPMPQQYAHPNATLHPHPQHPQPSATPTGQA
QQGGPPQHGGPPSHPAASPVQHSQHQQAAAAAAAAQALHLSNAPPQQQIYSAMAPTPPSM
TPNPQSPQASFPSAQQTVYIHPQQVPHGYNPNHMAHMQQAHMQSGIVQSHHPAPTHPPMM
LMATQGHPGGPQPPMPQTALSAIPVSSTTHFSYLAHPQVQAHHQQQL
NT seq 3384 nt   +upstreamnt  +downstreamnt
atgtcaatgaaggccggtggaaatcgaggcaagcccggtgggggcaacgcggctggtgcg
gccgcctcgggtgctggaggaagcggcgggggaagacagaatttgggcaggggaagacac
agtggcaaaggccctgcagcagtgattttcaatggtgtgtatgcaaatatgaggatggtc
catgttttgacttcagtggtggggaccaaatgtgagctgaaagtaaaaaatggagcagca
tatgaaggagtatttaagacatatggtccagagtgtgacctggtgttggacgcagcccac
agaaacagcccagagtccaacataggccccaggaaggaagatattgtagaaagcataatt
tttaaggcttctgatgttgtagtggtcaccttcaaagacgtggacttgaatttcgccaga
aaagtctctgctgacgcagacaacttcaccgatgcggcggttagtggtcgaattaatggc
gaacataaagagaaagacctggagccctgggacgggggggacactcacaactcggacagc
cttgagtccctggatacggatgtgtcaaacggatgggacccgaacgacatgttcaaatac
aacgaagagaaatatggagtcctgtctacttatgacagcagcctgtccacatacacggtc
cccttggagcgggatgactcggaggagtttcagaagagggaagctcgtgctgcccagctg
gctgaggagatagaggccagctctacatataaggcccgggtggctctggaaaacgatgag
cgctccgaggaggaaaaatacacagctgtggtacgaggggagagggagactcacatgctc
agcagagagaacaagtacattcctccgggtcagaggaacagggaggccatgtcatggggt
gcaggacggcagaattcaacacgtctgggtcagagctcagctggagcgtcagcctctcgg
ccgggaccccatgactacagtccaaactccgaccagagggtggtgaacggaggttcatcc
cattggccctcaccttgtccgtctccctcctcccgtcccccctctcgttaccagtctggc
tcctcctacctgcctcctcgggcaacctcgcccgccaggccaccctccagacccccctct
cgaccttccagaccttcctctcattcatcccacccctcctatccctcctcctcatcctca
tttcctcaacacgggcccacgtcgatagcctccactctgcccaaacgcatgtcctcagaa
ggtcctccgaggatgtctccaaaatcgcagcgaacccctcgtgctcacagagttccacct
tcacgaattagttcagtctccaccggagtggacttggcttcccataatccaccggtggag
gtttcagcaacacctccaaccaggagtagctcctctggagggacctggtcttcggtggtc
agtggagctcacagacctcggtctccacgccagaacaatgtgggtcgagcctctcccggc
tcctcctccctctcctcacccctgcaagcagctcctgtagaaagtgtgacgtcactgaca
tcagcttccactgctgctgctagccccgcccccaacaccgccgcctcttcattaggagat
gctaaagaatgtcgtgtccaggagacgagacaatcatctccttcagcaaacaatgagaac
atgaagcctttggacaactctccaagcatcacaagaccactctgtaaaggacctccttct
atggcaactgaccacagaaagcaaatagataatttgaaaagatttagtgtggattttaga
ttgcaacctagttccaatccagactctgccttggaccagattatgaccaagaccatcaga
gacccctcagataagccaaaagatctcacactggacaaagcctctgcagcgggacgagat
ggcactgaggagggggttgcggcgctcgctgctggcaactcaggagctgggcccgcttca
tccactagtgccacaatcagcagtaaaccgggcagccctgcagcgccttccccgtctccc
ttagctcctgaccagaagcgaggggggcaggatgtgacatcacaaggagttcaaacgaca
cccacatccacactgagtggatccaagcatgaagaaaaggaggagaagaaagaggcagta
caggatcaagtaagaaaatcaaccctgaacccaaatgctaatgaattcaaacccaggttt
aatacacagcctaagccggccaacaccccaacgcctcctcgaccacaaggccaacccagc
ccctccatcgtggtccagcagcccccaacggtctacggctgctttcctcagatgtacccg
ctgacacccgtcagccctggagttcagaaaagcataatatggaagtctccagctgtgtac
caggtccaaatgcctcatatggccgtgagccagtctaaaccttacagaccaggtaaagtt
cccaacatgccccagcagaggtctgaccagcaccacccgcctggaacgcctacaatgatg
cacccagcgactgcagcaggaccgcccatcgtagcacagaacccggcctactctgcgcag
tacttcacctgcagcccgcaacagttcaccagtcagccactggttcagcagatgccacac
taccagtcacaggcccagcatatgttcagtccggtcatgcagggcagtgccaggatgatg
ggccctcctacgcatggccagcccggcctggtttcttcttctactccccagtatgcagag
cagacccacaccatgtatgtttctcaagggccgatgcctcagcagtacgctcaccccaac
gccaccttacaccctcaccctcagcacccccagccctccgccacccctacaggccaagcc
cagcagggcggtcctccgcagcatgggggtcctcccagccaccctgcagccagtccggtc
cagcattctcagcaccagcaggcagcagcagcggcggcagcagcccaggccctccatcta
tccaacgcccccccacagcagcagatctactcagccatggccccaacgcccccttccatg
acgcctaacccccagtccccccaggcgtcgttcccctctgctcagcagactgtgtacatc
caccctcagcaggtgccgcacggctacaaccccaaccacatggcacacatgcagcaggcc
catatgcagtctggtattgtgcaatctcaccacccggcacccacccaccccccgatgatg
ctcatggccacgcaaggtcatccagggggtccacagccaccgatgccacaaactgccctg
agcgccatcccagtttcctccactacgcatttctcctacctggcacatccacaagttcag
gctcatcaccagcagcagctgtag

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