Cyprinodon tularosa (White Sands pupfish): 119798582
Help
Entry
119798582 CDS
T07496
Name
(RefSeq) dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119798582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119798582
Membrane trafficking [BR:
ctul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119798582
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119798582
RAVE complex
119798582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR19_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
119798582
NCBI-ProteinID:
XP_038164053
LinkDB
All DBs
Position
Unknown
AA seq
3089 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVNCSQRDGQIAASYGSIVCVFEPIQHQDQKYTSSTKLSCQWQKTGQFVLESMVRNLAW
HPTDGTLLTGSGSLQLWSNADGKDDGEGRGKPTRATERHSDSGWRCIWQSKTASPVSLIK
FSPDGQFFATAGQDDCLVKVWYSTNKWKSCVAQLFTPPDPSMSVQGELGFSFIYLAHPRS
VTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLISGYHSSHLSTPDGET
VRSAAPSSKHPCNGNTAGMSSQEFSFQESWHSSSYRDIPQPSLTGCTSHHLNRHHNHRRS
SNSGAPHANALCHFHIAASINPATDIPLLPSISALSAVDDEEPGGLFTVHWLNNKELHFT
LAMEVFLQQLGGSLEQRNESPNEDLYDEDNSDEEENRPSDSGGPGELPVAAVEHQVDILL
EEWNKGADMLFSIHPLDGSLLVWHVDWLDEYHPGMFRQTQVSFVSRIPVAFPTGDAISLS
HSVVMYACNKNVDLAIQHGRQRPTGTSLSRTRSVLINYGSHGKAASSSSLRLSIFTPNVL
MISKHDDGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHH
NALKTPEADSILAPPESYTTNLPSRGSRPACCISLGGVSQDPNAIYSELILWRVDPVGPL
SLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGVYCNSPSACFVASDGQSLRLYQAV
IEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDAITDFQGKEIQLLHVFEEE
LILGSVKTEDIQDVPCSPSIEASSKPAFSGHFFLVVVELTPTGRSLLHMWHLHLAACPVT
IEEPTGEKEINPVSPITGSQFIFDVPTSPVPKSKPCTSNLKSACRLSLTTHMLCSQEMAL
PQGVEVLSITPSAGHLSASCSLPSGPVPYLLATSCSDGKVRFWRCNVLRTEPSTVDHLVY
QWEEWRLLVEETLPNSSAVTIPGQPIKVSCCHSGRIAVAYRQATNPPLNSTPHLSSHRLL
PSPPALSSSPFCNNAYLTPSLTLKPCPSFALSPNPTITREPAVHISTFQCESTGGSQWIL
EQTIVLENTEPSTFCGSTDGHANHANNTDFSAANGNCPGSANRSPVHLDWVSQEDGSHIL
TVGIGTKIYMYGRLSGKPPDLGLSSETNREQSLSRLVLLRSVNLISSVEGSLPIPVSLSW
VRDGILVVGMDCEMHVYSQWQPPVPPKPSVTVVQDTDIGSSVSSILSAVRQEDVFTTGPP
TASLTLPKRSLTRSMMSLAQKLSGKKTVYDLPVEMEDSGLFEAAHQLFPTLPQYHPVQLL
ELMDLGKVHRAKAILSHLVKCIAGEIVILKDNATHPEKRVRSRTISVGGSTARDQKIFSK
SESSSPDYTEISSVPPLPLYALLAADEDTPHLEKGGSMSGDSGHGSSQTDAYDELFHTHN
TLDLDPLDNEEEETGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMAL
ADTIATTSTDLKDNQNKSKGGETLDECGLKFLLAVRLHTFLLTSLPPVHRAQLLRQGLST
CQYSWAFHSEAEEELLNMLPALQKGEPTWAELRAMGVGWWLRSTNKLRRCIEKVAKASFQ
RNNDPLDAAIFYLAMKKKAVVWGLYRSQKNTKMTEFFHNNFSEDRWRKAALKNAFSLLGK
QRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVIARLYESEFETSSTYKKILQRHVLG
QDKQIPVHPDPFLRSIAYWVLEDYSGALDTLIEQPANCKSCGPSESKSDSGPSAMSACNP
EVFNFYIYLRTHPLLLRRHFSSSDKAKVALTTEIRRADLISLDERRLFFTTAYAHLHAGC
PMLALEVLSKMPKVHKHSKVSHPVLKSIPHELSVGSRNGLSSEPDWSPPGLNGYHSDGNS
NSRSDSVLSFDWSQPSVTLPDEPLELKWDSDKDCEDEEEETNQEKRRKADNSVFQDRQDS
VLTIAETVKSEESEEGNDFIAPSEDIFLAHLKFTACLKIMSNELRTLSTGYELDGGKLRY
QLCQWLEREVVAHQRVCSYRPCLPEQSVPGDGPVSGLVEEEQPGSPPGDSQRSRRLWLQS
NQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSMRSVAAMNPQPTSIPLLTA
CTVNVKTVVANPIVYLTNLTHDILQTINALDSPPHPDVVNNEIYVMHTLAASLSACIYQC
LCDGHKYSHVNHFTGTVYQSILLSQKQALKAVSMDEAVQPNTPPAQWPGVASLICLLSSA
GEEIQPGLAVLLCEILTAVFLSLFVHGMATHSSNELFRIAAHPLNCNLWTTVFGGGARVP
VMDKSSSPARTPPPTSPSGSDRKSRRFRLLSSRSSSKEESGIEREGPSIPKIVVEQDTTS
IFKEQFVPPELSIWDYFIAKPQLPPSESRVNYDSEESQDSQDEDEDDEFGDVFEPNSPQR
EHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVASPLCHAVVKTLQRWEQVL
QKRLELFGGPPSKYISTYLQDEITTPGPALLRHKALFEPSNTPFRNSHHSALPVKRLWQY
LVKQEEVQETFIRNIFTKKPGTNQLVEDHPDIMKYSGVEGAGNSQTESDLGCPGGKARII
HKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDEVESKGVGGDDF
LVVHTRDDFASLHGTTPYTHSSPGTPINVPWLGGHQTGRGAAVMIKRNINNVRRMTSHPT
LPYYLTGAQDGSVRMFEWGHSQQIICFRGPGHSRVTRIRFNHQGNKFGIVDADGALSLWQ
TNTSGNTPKPYLTLQCHNKTANDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPANSLIH
TFCCHESGATVLSMAQRRQLLLTGGRKGWITILELPHRHQRQSFQAHDSPVKALAVDPTE
DCFISGSAEGNIKVWSLATQGLLYTFPNEHARQSLFRNLGTGVMQIEVGPSSHIFSCGAD
GTMKMRNLPNRFAVAENSSSPKSDVKFFI
NT seq
9270 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaagtccttaccggggctgtcaaccctggggacaattgcttctctgtc
gggagtgttaacaatgtgcctttcacggcctatgcgtcaggttgtgacgtggtgatttta
gggagtaattttgagcggctgcagatcatccctggagccaaacatggaaatatccaggtc
ggttgtgtcaactgctcacagcgagatggacagattgcagcttcctatggaagcatcgtt
tgtgtctttgagccaattcagcaccaagatcaaaagtatacttcatcaactaaactaagc
tgtcagtggcagaagactgggcagtttgttttagagtcaatggtacgaaacttggcttgg
caccccacagatggtactctgttaaccggctctggcagccttcagctgtggtccaatgct
gatgggaaagatgacggtgaaggaaggggaaaaccaacaagagccacagaacgacactct
gattctggctggaggtgtatctggcagagcaagactgcatctccagtcagcctaattaag
ttctcacctgatgggcagttctttgctactgctggacaggatgactgtctggtgaaggtg
tggtacagcacaaacaagtggaagtcatgtgttgcacagctgtttactccaccagaccct
agtatgagtgttcagggagagctgggcttttccttcatctacttggcccatcctcgctcc
gttactggtttttcctggaggaagaccagcaagtacatgccacgaggggccgtctgtaat
gttctgctcacctgttgtaaggacagtgtttgccggctgtgggcagagactctgttgcca
ggtgacagcctcatctctggttaccatagcagccatctttctactcctgatggggagacg
gtcagatctgctgccccctcttcaaaacacccatgcaatgggaatacagctggaatgtca
tcacaagagttcagtttccaagaatcgtggcattcgtcttcttaccgggatattcctcaa
ccgtctttgactggctgcacgtctcaccatctgaaccgacaccataaccacaggaggagc
agcaacagtggagctcctcacgccaatgctctctgccacttccacattgcagccagcatt
aacccggccacagacattcctttgctaccttccatctctgctctgagtgcagtagatgat
gaggaacccggcggtctgtttacggtccactggcttaacaataaggagcttcacttcact
ttagccatggaagtctttctgcagcagcttggaggaagccttgaacaaaggaatgaatcc
ccaaatgaagacctttatgatgaagataactcagatgaagaagagaatcggccaagtgac
tctggaggcccaggggagcttcctgtagccgctgtggagcatcaggtggacattttgtta
gaagagtggaataaaggggcagacatgctgttcagtatacatcccctggatggctctttg
ttagtctggcatgtggactggttagatgaataccacccaggcatgttcaggcaaacccag
gtgtcgtttgtgtcccgcattcctgtggctttccctacaggtgacgcaatctccttgagc
cacagtgtggttatgtacgcctgcaacaagaatgtggatctggccattcaacacggcaga
cagcggccgactgggacctcattgtctcgaaccagatctgttctaataaactatgggagt
catggaaaggctgcatccagcagcagcctcagactgagcattttcacccccaacgttctc
atgatctccaaacatgatgacggctctctgaaccagtgggctgtcagttttgcagaggac
tctgctttctccacagtgcttagtgtctctcacaaatcacgctactgtggtcaccgtttc
cacctcaatgacctggcctgtcactccctgctccctcttctcctcaccacttcacaccac
aacgccttgaagacgccagaggctgacagcatccttgctcctccggagtcctacaccact
aatctgccatctcgtgggtcacgacccgcctgttgtatctccctcggaggggtctcccag
gatcccaatgccatctacagtgagctgattctgtggagggtggaccctgtggggccgctg
tctttgtcaggcggagtctcagagcttgctaggataaactccctgcatgcctcagctttt
gccaatgtagcctggctaccaacactcattcccagcagctgtttaggtgtttactgcaac
tctcccagcgcttgctttgtggcgagtgacggccagtcactcaggctctatcaggctgtt
attgaggcaaagaaacttctgagtgagctttccaaccctgagatttctaaatacgttggg
gaggtgtttaacatcatcagtcagcagtccacagcaaaaccaggctgtatcattgagctg
gatgccattacagactttcaaggtaaggagatccagcttctgcacgtctttgaagaggag
ctgatcctcggcagtgtcaaaaccgaagacattcaagacgttccctgttctccttctatt
gaagcttccagtaagccagccttctcgggacatttttttctggtggtagtggaattgaca
cctacaggtcgctctctgctccatatgtggcatctacatctggcagcttgtcctgtcact
atagaggaacctacaggagagaaagaaatcaacccagtttctcctataaccgggtctcag
ttcatcttcgatgtgcccacctctccagtaccgaagagtaaaccttgcacttccaactta
aagagcgcatgccgtctgagcctgaccacgcacatgctgtgcagccaagagatggctctg
ccacaaggggttgaagtcctcagcattactccttcagcaggccatctgagtgcatcgtgt
tctctaccgtcaggccctgtgccttatctccttgccacttcctgttctgatggaaaggtg
cggttctggaggtgtaacgttttgagaactgaaccctccactgtcgaccatttggtgtat
cagtgggaagagtggcgtctgctggtggaggagacgcttcccaacagcagcgctgttacc
attcccggtcagcccatcaaggtgagctgctgtcactctggaaggatcgctgtggcctac
aggcaggcgaccaacccaccactcaactcaacaccccacctgagctctcacagactgcta
ccttctcctccagccttgtcatcctcccctttctgcaacaacgcctacctgaccccgtct
cttaccttaaagccttgtccaagttttgctctcagccctaacccaaccatcacaagggaa
ccagcagttcacatcagcacctttcagtgtgagtccactggtggttcacagtggatattg
gagcaaactatagtcctggagaacacagaaccctcaactttctgcggctccactgatgga
catgctaatcatgcaaataacacagacttctctgcagctaatggaaactgtcctggttct
gctaataggagcccggttcatttagactgggtttcccaagaagatgggtcacatatattg
actgttggcattgggactaagatttatatgtatggccgtctctctggcaagcctccagat
ttaggcctgtcttctgaaacaaacagagagcaaagtctgtcccgtctggttctccttcga
tctgtcaatctgatttcctccgttgaaggctccttgcctatcccagtctccctctcctgg
gttcgggatggaatcttggttgtgggaatggactgtgagatgcatgtttactcccaatgg
caacccccagttccccctaaacccagcgttaccgtcgtccaagacacggacatcggcagc
agcgtctcctctatactctcagctgtcagacaggaggacgttttcaccaccggtcctccc
acagcgtcactaaccctgcctaaaagatccctaacaagatcaatgatgagcctggcgcag
aaacttagtgggaagaaaaccgtctatgaccttcctgtggagatggaagactctggactt
tttgaagcagctcaccaactctttcctactctgccccaataccatccagtacagttactg
gagctcatggatctgggcaaggttcaccgtgccaaagcaatcctctcacacttagtaaaa
tgcatcgctggggaaattgtgatacttaaggacaatgccacccatccggagaaacgtgtg
cgctctcggactatcagtgtaggaggcagcacagccagggaccagaagatattcagcaaa
tcagaaagctccagccctgactacacagagatcagctccgtccctcccctgcctttgtac
gctttgctggcagctgatgaggatacgccacatcttgagaaaggaggcagtatgagtggt
gatagcggacatggctccagtcagaccgatgcctatgatgagctgtttcatacccataac
accctggatctggaccctctggacaatgaagaagaagaaactgggaataaggttatagac
ctttcccagtacagtccaacatactttggcccagaacacgctcaggttttgtccagccac
ctcctccactccagcctgccagggttaactcgaatggagcagatgtctctcatggcactg
gctgacaccattgccacgacgagcacagacctaaaagataaccagaataagagcaaaggt
ggagaaactttggatgagtgtgggttgaagttcttgctggctgtcagacttcacaccttc
ctcctaacatccctgcctcctgtccatcgagcccagctgttacgccaaggcctttcaaca
tgccagtactcttgggccttccactcagaagctgaggaggagctgctgaacatgctgccc
gccctgcagaagggagagcccacctgggccgagctgcgggccatgggtgtgggctggtgg
ctgcggagcaccaacaaactgcgcaggtgcattgaaaaggttgctaaagcttcatttcag
agaaacaatgatcctctggatgctgctatattttatctggcaatgaaaaagaaggcagtg
gtttgggggctgtacagatctcagaagaatacaaaaatgacagagttcttccataacaac
ttcagcgaggacaggtggaggaaagccgcattaaagaatgccttctctttgttgggaaag
cagcggttccagcattctgcagccttttttctccttgctggttcccttaaggatgctgtg
gaggtgtgtttggagaaaatgcaggatttgcagcttgccctggtgatcgctagattgtat
gaatctgagtttgagacatcctcgacctataaaaagatcctccagagacatgttttggga
caagacaaacagattccagttcatccagatccgttcttgcgaagcatagcttactgggtc
ctagaggattacagcggggcattggacacactaattgagcagcctgcaaactgcaaaagc
tgtggaccctctgagagcaaatctgacagtggtccctctgccatgtctgcttgtaaccct
gaggttttcaacttttacatctacctccggacacaccctctgctccttcgtcgccatttt
agctcttctgacaaagctaaagtggctctgaccacagagatccgtagagctgacttgatc
agcctggatgagaggagactgtttttcactactgcatatgcacacctgcacgctgggtgc
cccatgttagcactagaggtcctttccaagatgcccaaagttcacaagcactccaaagtt
tctcatcctgtgcttaaaagcattccacatgaactaagtgtgggcagcaggaatgggttg
tcgtcggaacctgactggtctccgcctggcctgaacggctaccactctgatgggaacagc
aacagccggtccgattcagtgttaagttttgactggagccagccatcggtgacccttcca
gatgagcccctggagctgaagtgggacagtgacaaagactgtgaggatgaggaggaagag
acaaatcaggaaaagcgtagaaaagcagacaacagcgtgtttcaggaccgtcaggactcc
gtgttgacgatagcagaaactgtgaaaagtgaggaaagcgaagagggcaatgatttcatc
gctccgtctgaggacatctttttggcccatcttaagttcaccgcctgcttgaagatcatg
agcaacgagcttcggactctgtctactgggtacgaactggatggagggaagctgcgttat
cagctctgtcagtggttggaaagagaggtggtggctcaccagcgtgtttgcagctatagg
ccatgcttaccagaacagtctgtcccgggggatggccctgtttctggactggtggaggag
gagcagcccggcagcccccctggagacagccaaaggagcaggagactttggctccagagc
aaccagcctttactgaggatgtttctgagctactgcagcttacatggctcccatggtgga
ggacttgcttctgtacggatggagcttatactgctgcttcaagagtctcatcaggatgac
tccatgaggtcagtggcagcaatgaatcctcagccgacctctatccctctgctcactgcc
tgcacagtcaatgttaagaccgtagtggccaaccccatcgtctatctgaccaatctgact
cacgacatcctgcaaaccatcaatgcgctcgactcacctccacatccagatgtggttaat
aatgagatctatgtaatgcataccctcgctgcttccttgtctgcatgtatttatcaatgt
ctttgtgatggacacaagtacagccatgtgaaccattttactgggactgtgtatcagagc
attttactgtctcagaagcaggcactgaaagccgtcagcatggatgaggctgttcaacca
aacactcctcctgctcagtggcctggtgttgcctcccttatttgcctgctgagttctgca
ggtgaggagatccagccgggcttggctgtgctgctctgtgagatcctgactgcagtcttc
ctcagcctgtttgttcacgggatggcaacgcactccagcaacgagctttttcgcatcgcg
gcgcatccacttaactgcaacctttggacgactgtgtttggaggaggcgcacgtgtccct
gtcatggataaatccagcagccctgctagaacgccacctccaacctccccaagtgggtca
gacaggaaatcacgacgattcaggcttctgtcatcccgcagcagctccaaggaagagtca
ggaattgagcgggaaggaccatccattccaaagattgttgtggaacaagacactacctcc
atctttaaagagcagtttgttcctccagagctcagtatctgggattattttattgccaag
cctcagctgccaccatcggaaagcagagttaattatgactcagaggagagccaggacagc
caggatgaagatgaagacgatgaatttggagacgtctttgagcccaactctccgcagaga
gaacattccaaccataattcatacagctggtgtttgatgcgtctagccatggttcagctg
gtattagtcaacctcaagtctttttacccgatggcaggatacgatttgttagatttgcct
gtggcctctccactatgtcacgccgtagttaagacgctgcaacgatgggagcaggtgctg
caaaagaggctggagctgttcggcggccctccctctaagtatatctccacttacctccag
gatgaaatcaccacacctggccctgccctgctcagacacaaagccctatttgaaccatct
aacactcctttcagaaatagccaccattcagcactgcctgtgaagcgtttatggcagtat
ttggtcaaacaggaagaggtgcaggagacattcattagaaacatcttcacaaagaaacca
ggcacaaatcagttggttgaggaccaccctgacattatgaaatattcaggagtggaaggg
gcaggaaacagtcagacggagtcagatctgggctgccccggaggcaaagcacgcatcatc
cacaaggaatctgacatcatcacagcctttgccatcaacaaggcaaaccgtaactgttta
gtcatggcctccactcatgacattcaggagctggatgtgtcatccattttggccacacag
atcttgacttggatcgatgatgatgaagtggaatccaaaggagtcggcggtgatgacttc
ctggtggtccacacgcgtgacgactttgcctcgcttcacggcacaaccccttacacccac
agcagccccggcacacccatcaatgtgccgtggctgggaggccatcagaccggcaggggt
gcagctgtgatgataaagagaaatatcaacaatgtgagaagaatgacctctcatcccaca
ctaccatactacctgactggggctcaagacggtagcgtcaggatgtttgagtggggtcac
tcccagcagatcatctgcttcagaggtccgggtcactccagggtcaccaggatccgattc
aaccaccaaggaaacaagtttggtattgtagatgcagatggagcattaagtctctggcaa
actaacaccagtgggaacacacccaaaccatacctgactttgcagtgtcacaacaagacc
gctaatgactttgttttcgtgggctcttcttctctcatcgccactgcaggtctttcaact
gacaacaggaatgtttgtctgtgggacacgctggtgactcctgctaacagcctcatacac
actttctgctgccatgagtctggcgccaccgtgctctcaatggcgcagcggcggcagctt
ctcctcaccggcggaagaaaaggttggatcaccatcttggagctcccacacagacaccag
cggcagagtttccaggctcacgactcgccggttaaggctctggctgtggatcccaccgag
gactgtttcatcagcggatcagctgagggaaacattaaggtctggagtctagccacgcag
ggcctcctctacacttttccaaacgaacacgcccgccagtcgctgttcaggaacctcggg
acgggagtgatgcagatcgaggtgggaccatctagtcacatcttctcctgcggcgccgac
ggaaccatgaagatgaggaaccttcccaaccgctttgctgtggcggaaaacagcagcagc
cccaagagcgacgtcaagttcttcatatag
DBGET
integrated database retrieval system
