Cyprinodon tularosa (White Sands pupfish): 119798721
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Entry
119798721 CDS
T07496
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04517
IgSF CAM signaling
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119798721
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119798721
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119798721
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119798721
Intermediate filaments
Intermediate filament-binding proteins
119798721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119798721
NCBI-ProteinID:
XP_038164221
LinkDB
All DBs
Position
Unknown
AA seq
2358 aa
AA seq
DB search
MELQSPTAALPGSLSPLSPVSDYAGPLSPSGIPGPSHPAGPGRAPSPGLSGQAAFNYNQL
EGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
ISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLID
FDKLKKSNAHYNLQNAFNQAEQHLGLTKLLDPEDISVEHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDHALETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVFTPREGKLISDINKAWERLEK
AEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGYDLQAVEAAT
KKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVIRLWEYLLELLRARR
HRLEQNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQA
DRVQNVNSNAQKFATDTEGYKPCDPQVIRDRVAHMEFCYQELSQLAAERRARLEESRRLW
KFFWEMAEEEGWIREKEQILSSEDYGKDLTGTVRLLSQHKAFEDEMSGRAAHLQQTIKQG
KDLVADNHFGAEKIKERIRDIEEQWAALERLSAVRKARLQAACNHHQFQADADDIDTWML
DVLRIVSSVDVGHDEFSAQALVKKHKDVAEEISSYRPAIDALHEQAQTLPPERANSEEVQ
NRLAGIEERYKEVAELTRLRKQALQDALALYKLLTEASACELWIDEKEQWLNSMEIPEKL
EDLEVIQHRFENLEPEMNSQASRVAVVNQVARQLIHSGHPSEREIKTQQDKLNTRWSQFR
DLVDQKKEILNSTLGVQNYHLECNETKSWIKEKTKVIESTQELGNDLGGVMALQRKLTGM
ERDLVAIEDKLKDLEKEAEGLSSEHPEQYAAIKGQLAEITSVWNEMKGTLKNREESLGEA
SKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLSQHENIKNEIRNYEEDYQKM
RDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSNTYQLFLRDTKQA
EAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDASEEKISGVVDTGRRLVTDGNI
NAERIQEKVDSIDQRHKKNRQAAKDLLMKLKDNRDLQKFLQDCQELSLWINEKMLTAQDL
TYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGQALAAEKPETEAMVKEKLASLKTM
WEVLESTTQTKAKCLFDANKAELFTQSCADLDKWLTGLDGQLQSDDFGKDLTSVNIMLKK
QQMLESQVEVRQKEVEELQRQSQALSQEGKGSDEVEGRRITVEKKFQALLAPLKMRRDNL
MASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRF
DDIFERSQHVLRADSPTAEPIRQRLTELQALWDQIKKETEKRHSRLSEAHEAQQYYFDAA
EAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADTVHQLSSTSRGLVAAG
HPDSERIGMRQSKVDKLYAGLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAG
SHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNKQADELINAGHSDSATIAEWKDG
LNEAWADLLELIDTRTQILAASYELHKFYHDAKEILNRILDKQKKLPEELGRDQNTVETL
QRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAAEG
RRVKLVDTADKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDA
RNDSFTACIELGKALLARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQF
SRDAGVAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTM
ELLEVRRMQEEEEKKRQPAEAQAAEAAAQSRDGEPASQNGLPSEQEPPRESVDGGEAVNG
VWEPSPSGSPGASRKGKPSQAATLPAKSQQDAPTSQMDGFLHRKHEWEGHNKKASNRSWH
NVYCVINQQEMGFYKDQKSASQGIPYHSEIPISLKEALCEVAVDYKKKKHVFKLKISDGN
EYLFQAKDDEEMNSWISAISAAVAGVKSEVTPSGHSTPAPAARAQTLPATVAATAAESSP
GKREKDKEKRFSLFSKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagccccaccgccgccctccccggctccctctcacccctctcccccgta
tcggactatgcggggcctctgtccccgtccgggatccccgggccgtcccatccggccggt
ccgggtcgggctcccagtcccggcctctcaggacaggcagcctttaactacaaccagctg
gagggacgcttcaaacagctccaagatgagcgtgaggcggtgcagaagaagaccttcacc
aagtgggtgaactcccacctgtccagagtctcctgccggatcacggacctgtacatggac
ctgagggacggacggatgctcatcaagctgctggaggtcctgtcaggagagaggctgccc
aaacccacaaagggccgcatgaggatccactgcctggaaaatgtggacaaagctctgcag
ttcctgaaggagcagcgggtccacctggagaacatgggctcccacgacatcgtggatgga
aaccaccgcctgacgctgggcctcatctggacaatcatcctgcgcttccagattcaggac
atcagcgtggagacggaggacaacaaagagaagaagtctgctaaagatgctctgctgctc
tggtgtcagatgaagacggcagggtatcccaacgtcaacatccacaacttcaccaccagc
tggagggacgggatggccttcaacgccctgatccacaagcacagacccgacttgatcgac
tttgataagctgaagaaatcaaacgctcactacaatctacagaatgccttcaatcaggcc
gagcagcacctgggcctcaccaagctgctggaccctgaagacatcagcgtggagcatcct
gatgagaagtccatcatcacctacgtcgtcacctactaccactacttctccaagatgaag
gccctgaaggtggaggggaagaggatcgggaaggttctggatcacgctctggagacggag
aaaatgatcgagaagtacgagtctctggcgtcggacctgctggagtggatcgaacagacc
atcatcatcctcaacaacaggaagtttgccaactctctggtgggcgtccagcagcagctg
caggccttcaacacgtaccgcaccgtggagaaaccaccaaagtttacagagaaggggaac
ctggaggttctgctcttcaccatccagagtaagatgagagccaacaaccagaaggtcttc
acccccagagagggaaaactcatctctgacatcaacaaggcgtgggagcgtctggagaag
gcggagcacgagcgggagctggctctgaggacggagctgattcgtcaggagaagctggag
cagctggcccgccgcttcgaccgtaaggcggccatgagggagacgtggctgagtgagaac
cagaggctggtctctcaggataatttcggatatgacctccaggccgttgaagccgccaca
aagaaacacgaagccatagaaacggacatcgcggcgtacgaggagcgagttcaggcggtg
gttgccgtggcgaaggagctggaggcggagagttaccatgacatcaagcgcatcacagcc
aggaaggacaacgtgatccgtctgtgggagtacctgctggagctgctgagggcccggcgc
cacaggctggagcagaacctgggcctgcagagagtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgctctctcaggattacggcaaacacctgctg
ggtgtggaggacctgctgcagaaacacgctctggtggaagccgacatcgccattcaggcc
gaccgagtccaaaacgtcaacagtaacgctcagaagtttgccaccgacacagaaggttat
aagccctgtgacccgcaggtcatcagggaccgcgtggcccacatggagttctgctaccag
gagctgagccagctggcagctgaacgccgagctcgcctcgaggaatcccgccgactctgg
aagttcttctgggagatggcggaagaggagggatggatcagggagaaggaacagatcctg
tcctctgaggattatgggaaggacctgacaggcacggtgcgcctgctcagtcagcacaaa
gccttcgaggacgagatgagcgggcgagccgcccacctgcagcagaccatcaaacaaggc
aaggacctggtggccgacaaccacttcggcgccgagaagatcaaggagcggatccgggac
atcgaggagcagtgggcagctctggagcgtctgtctgctgtgagaaaagcacgcctgcag
gcggcgtgcaaccaccaccagttccaggctgatgcagatgacatcgacacatggatgctg
gacgttctgcgcatcgtctccagcgtggacgtcggccatgacgagttctccgctcaggct
ctggtgaagaaacacaaagacgtcgcagaggagatcagcagctatcggcccgccatcgac
gctctgcatgagcaggcccagacgctgccgccggagagggccaactccgaggaggtccag
aaccggctggcgggcattgaagagcgctacaaggaggtggcagaactgacccggctcagg
aagcaggccctgcaggacgccctggcgctctacaagctgctgactgaagccagcgcctgc
gagctttggatcgacgagaaggagcaatggctcaacagcatggagatcccagagaaactg
gaagacctggaggtcatccagcaccggtttgagaatctggagccggagatgaacagccag
gcctcccgggtcgccgtggtgaaccaggtagccaggcagctgatccacagcggacatccc
agtgagagggagatcaagacccagcaggacaaactcaacaccaggtggagtcagttcaga
gacctggtggaccagaagaaggagatcctgaactcaactctgggagtccagaactaccac
ctggagtgtaatgagaccaagtcctggatcaaagagaagaccaaggtgattgagtccacg
caggagctgggcaacgatctgggcggagtcatggctctgcagaggaagctaacagggatg
gagcgggacctggttgccatcgaggacaaactgaaagacttggagaaagaggcggagggt
ttgtcttccgaacacccggagcagtacgcagcgatcaaaggacagctggctgagatcacc
agcgtctggaatgagatgaaggggacgttgaaaaaccgtgaggagtctctgggcgaggcc
agcaagctgcagcagttcctgcgagacttggacgacttccagtcatggttgtcccggacg
cagacggccatcgcctcggaggacatgccgaacactctggctgaggccgagaagctgctc
tcccagcacgaaaacatcaagaacgagatccgcaactatgaggaggactaccagaagatg
cgggacatgggcgagatggtgacgcaaggccagacggacgctcagtacatgttcctcagg
cagcgtcttcaggcgctggacaccggctggaacgagctgcacaagatgtgggagaaccga
cagaacctgctgtcccagtccaacacctaccagctgttcctgagggacaccaagcaggcc
gaggccttcctcaacaaccaggagtatgttctggctcacaccgagatgcccaccaccctg
gagggggccgaggccgccatcaagaagcaggaggacttcatgaccaccatggatgccagt
gaggaaaagatcagcggtgttgttgacacaggacgccgcctggttactgacggcaacatc
aacgccgagcgcattcaggagaaggtggactccatcgaccagagacacaagaaaaaccga
caggcagcaaaagatctgctgatgaagctgaaggacaacagagacctgcagaagttcctg
caggactgccaagagctgtccctgtggatcaacgagaaaatgctgaccgcccaggacctg
acgtacgacgaggccaggaacctccacagcaagtggctgaaacatcaggccttcatggca
gagctgcagtccaacaaggagtggctggataagattgaaaaggacggccaggcgctggca
gcagagaagccagagacggaggccatggtgaaggagaagctggcgtccctgaagaccatg
tgggaggtcctggagtccaccacccagaccaaggccaagtgtctgtttgatgccaacaag
gccgagctgttcacgcagagctgcgccgacctcgacaagtggctgaccggcctggacggc
cagctccagtccgacgactttggcaaagacctcacctccgttaacatcatgctgaagaag
cagcagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagaga
cagtctcaggccctcagccaggaggggaaaggctccgacgaggtggaagggaggaggatc
accgtggagaagaagttccaggcgctgctggcgcctctgaagatgagacgcgacaacctg
atggcgtcccgcgagatccaccagttcaaccgagacgtggaggatgagatcctctgggtg
gaggagaggatgcctctggccacatctactgaccacggacacaacctgcagacggtgcag
ctgctcatcaagaagaaccagacgctgcagaaggagatccagggtcaccagcctcgattc
gacgacatctttgagcgcagccagcacgttctgagggccgacagccccacggcggaaccc
atccgccagaggctgaccgagctgcaggcgctgtgggatcagatcaagaaggagacggag
aagcggcattcccggctcagcgaggcccacgaggcccagcagtactacttcgacgccgcc
gaggccgaggcctggatgagcgagcaggagctgtacatgatgtcagaggagaaggccaag
gacgagcagagctccgtggccatgctgaagaagcaccagatcctggagcaggccgtggag
gattacgccgacaccgtccaccagctgtccagcaccagccggggcctggtggctgcaggc
caccctgacagcgagcgcatcggcatgcgtcagtctaaggtggataagctgtacgccggc
ctgaaggacctcgctgaagaacggcgcgggaagctggacgagcgtttccgactcttccag
ctcaacagggaggtggacgacttggagcagtggatcgcagagagggaggtggtggccggg
tcccatgagctgggacaggactacgaacacgtcacgatgctgcaggagcgattccgagaa
ttcgcccgtgacaccgggaacatcggccaggagcgcgtggacggcgtgaacaagcaggcg
gacgagctgatcaacgcgggccacagcgactccgccaccatcgccgagtggaaggacggc
ctgaacgaggcctgggccgacctgctggagctcatcgacacgcgcacgcagatcctcgcc
gcctcctacgagctccacaagttctaccacgacgccaaggagatcctgaaccgcatcctg
gacaaacaaaagaagctcccggaggagctgggccgggaccagaacacggtggagaccctg
cagaggatgcacaccaccttcgagcacgacattcaggctctggggacgcaggtccggcag
cttcaggaagacgccgtccgtctgcagtcggcgtacgccggagacaaagcggacgacatc
cagaagagagaaggagaggtcctggaggcctggaagaacctgctggaggcagcggagggc
cggcgggtcaagctggtggacacggccgacaagttccgcttcttcagcatggtgcgggac
ctgatgctgtggatggaggacgtgatccggctgatcgaggctcaggagaagcccagggac
gtgtcgtcggtggagctgctgatgaacaaccatcagggcatcaaggcggagatcgacgcc
cgaaacgacagcttcacggcctgcattgagctggggaaggcgctgctggcccggaaacac
tacgcttcagaggagattaaagagaagttgcttcagctgacagacaagaggaaagagatg
atcgataagtgggaggaccgatgggagtggctcagactggtgctggaggtgcaccagttc
tcccgggacgcgggcgtggccgaggcctggctgctggggcaggagccctacctgtccagc
agggagatggggcagagcgtggacgaggtggagaagctcatcaaacgccacgaagccttc
gagaagtccgccgccacctgggaggagcgcttctcggctctggagaggctgacgacgatg
gagctactggaagtgagaagaatgcaggaggaagaggagaagaagaggcaaccggccgag
gctcaggccgccgaggctgcagctcagagcagagacggcgagccggcgtcccagaacggg
ctgccgtccgagcaggagcccccccgggagagcgtggatgggggcgaggcagtgaacggg
gtgtgggagcccagcccctccgggtctcctggagcgtcccgtaaaggcaaacccagccag
gcggcgacgctgccagctaaaagccaacaggacgcccccacgtcgcagatggacggcttc
ctgcatcgcaaacatgagtgggagggtcacaacaagaaggcctccaacaggtcctggcac
aacgtctactgtgtgatcaaccagcaggagatgggcttctacaaggaccagaagagcgcc
agtcagggcatcccctaccacagcgagattcccatcagcctgaaggaggcgctgtgtgag
gtcgctgtggattacaagaagaagaaacacgtctttaagctaaagatctctgatgggaac
gagtatctcttccaagccaaagacgacgaggagatgaactcctggatctcagccatctct
gccgccgtggcgggggtcaaatcggaggtgacgcccagcggccacagcacgccggccccc
gcagctcgcgctcagacgctgccggcgacggtggcggcgacggcggcggagtcgagtcct
ggcaaacgggagaaagacaaggagaaacgcttcagcctcttcagcaagaagaaatag
DBGET
integrated database retrieval system
