Cyprinodon tularosa (White Sands pupfish): 119798721
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Entry
119798721 CDS
T07496
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119798721
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119798721
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119798721
Intermediate filaments
Intermediate filament-binding proteins
119798721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119798721
NCBI-ProteinID:
XP_038164221
LinkDB
All DBs
Position
Unknown
AA seq
2358 aa
AA seq
DB search
MELQSPTAALPGSLSPLSPVSDYAGPLSPSGIPGPSHPAGPGRAPSPGLSGQAAFNYNQL
EGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLP
KPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQD
ISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLID
FDKLKKSNAHYNLQNAFNQAEQHLGLTKLLDPEDISVEHPDEKSIITYVVTYYHYFSKMK
ALKVEGKRIGKVLDHALETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQL
QAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVFTPREGKLISDINKAWERLEK
AEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGYDLQAVEAAT
KKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVIRLWEYLLELLRARR
HRLEQNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQA
DRVQNVNSNAQKFATDTEGYKPCDPQVIRDRVAHMEFCYQELSQLAAERRARLEESRRLW
KFFWEMAEEEGWIREKEQILSSEDYGKDLTGTVRLLSQHKAFEDEMSGRAAHLQQTIKQG
KDLVADNHFGAEKIKERIRDIEEQWAALERLSAVRKARLQAACNHHQFQADADDIDTWML
DVLRIVSSVDVGHDEFSAQALVKKHKDVAEEISSYRPAIDALHEQAQTLPPERANSEEVQ
NRLAGIEERYKEVAELTRLRKQALQDALALYKLLTEASACELWIDEKEQWLNSMEIPEKL
EDLEVIQHRFENLEPEMNSQASRVAVVNQVARQLIHSGHPSEREIKTQQDKLNTRWSQFR
DLVDQKKEILNSTLGVQNYHLECNETKSWIKEKTKVIESTQELGNDLGGVMALQRKLTGM
ERDLVAIEDKLKDLEKEAEGLSSEHPEQYAAIKGQLAEITSVWNEMKGTLKNREESLGEA
SKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLSQHENIKNEIRNYEEDYQKM
RDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSNTYQLFLRDTKQA
EAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDASEEKISGVVDTGRRLVTDGNI
NAERIQEKVDSIDQRHKKNRQAAKDLLMKLKDNRDLQKFLQDCQELSLWINEKMLTAQDL
TYDEARNLHSKWLKHQAFMAELQSNKEWLDKIEKDGQALAAEKPETEAMVKEKLASLKTM
WEVLESTTQTKAKCLFDANKAELFTQSCADLDKWLTGLDGQLQSDDFGKDLTSVNIMLKK
QQMLESQVEVRQKEVEELQRQSQALSQEGKGSDEVEGRRITVEKKFQALLAPLKMRRDNL
MASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRF
DDIFERSQHVLRADSPTAEPIRQRLTELQALWDQIKKETEKRHSRLSEAHEAQQYYFDAA
EAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADTVHQLSSTSRGLVAAG
HPDSERIGMRQSKVDKLYAGLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAG
SHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNKQADELINAGHSDSATIAEWKDG
LNEAWADLLELIDTRTQILAASYELHKFYHDAKEILNRILDKQKKLPEELGRDQNTVETL
QRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAAEG
RRVKLVDTADKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDA
RNDSFTACIELGKALLARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQF
SRDAGVAEAWLLGQEPYLSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTM
ELLEVRRMQEEEEKKRQPAEAQAAEAAAQSRDGEPASQNGLPSEQEPPRESVDGGEAVNG
VWEPSPSGSPGASRKGKPSQAATLPAKSQQDAPTSQMDGFLHRKHEWEGHNKKASNRSWH
NVYCVINQQEMGFYKDQKSASQGIPYHSEIPISLKEALCEVAVDYKKKKHVFKLKISDGN
EYLFQAKDDEEMNSWISAISAAVAGVKSEVTPSGHSTPAPAARAQTLPATVAATAAESSP
GKREKDKEKRFSLFSKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagccccaccgccgccctccccggctccctctcacccctctcccccgta
tcggactatgcggggcctctgtccccgtccgggatccccgggccgtcccatccggccggt
ccgggtcgggctcccagtcccggcctctcaggacaggcagcctttaactacaaccagctg
gagggacgcttcaaacagctccaagatgagcgtgaggcggtgcagaagaagaccttcacc
aagtgggtgaactcccacctgtccagagtctcctgccggatcacggacctgtacatggac
ctgagggacggacggatgctcatcaagctgctggaggtcctgtcaggagagaggctgccc
aaacccacaaagggccgcatgaggatccactgcctggaaaatgtggacaaagctctgcag
ttcctgaaggagcagcgggtccacctggagaacatgggctcccacgacatcgtggatgga
aaccaccgcctgacgctgggcctcatctggacaatcatcctgcgcttccagattcaggac
atcagcgtggagacggaggacaacaaagagaagaagtctgctaaagatgctctgctgctc
tggtgtcagatgaagacggcagggtatcccaacgtcaacatccacaacttcaccaccagc
tggagggacgggatggccttcaacgccctgatccacaagcacagacccgacttgatcgac
tttgataagctgaagaaatcaaacgctcactacaatctacagaatgccttcaatcaggcc
gagcagcacctgggcctcaccaagctgctggaccctgaagacatcagcgtggagcatcct
gatgagaagtccatcatcacctacgtcgtcacctactaccactacttctccaagatgaag
gccctgaaggtggaggggaagaggatcgggaaggttctggatcacgctctggagacggag
aaaatgatcgagaagtacgagtctctggcgtcggacctgctggagtggatcgaacagacc
atcatcatcctcaacaacaggaagtttgccaactctctggtgggcgtccagcagcagctg
caggccttcaacacgtaccgcaccgtggagaaaccaccaaagtttacagagaaggggaac
ctggaggttctgctcttcaccatccagagtaagatgagagccaacaaccagaaggtcttc
acccccagagagggaaaactcatctctgacatcaacaaggcgtgggagcgtctggagaag
gcggagcacgagcgggagctggctctgaggacggagctgattcgtcaggagaagctggag
cagctggcccgccgcttcgaccgtaaggcggccatgagggagacgtggctgagtgagaac
cagaggctggtctctcaggataatttcggatatgacctccaggccgttgaagccgccaca
aagaaacacgaagccatagaaacggacatcgcggcgtacgaggagcgagttcaggcggtg
gttgccgtggcgaaggagctggaggcggagagttaccatgacatcaagcgcatcacagcc
aggaaggacaacgtgatccgtctgtgggagtacctgctggagctgctgagggcccggcgc
cacaggctggagcagaacctgggcctgcagagagtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgctctctcaggattacggcaaacacctgctg
ggtgtggaggacctgctgcagaaacacgctctggtggaagccgacatcgccattcaggcc
gaccgagtccaaaacgtcaacagtaacgctcagaagtttgccaccgacacagaaggttat
aagccctgtgacccgcaggtcatcagggaccgcgtggcccacatggagttctgctaccag
gagctgagccagctggcagctgaacgccgagctcgcctcgaggaatcccgccgactctgg
aagttcttctgggagatggcggaagaggagggatggatcagggagaaggaacagatcctg
tcctctgaggattatgggaaggacctgacaggcacggtgcgcctgctcagtcagcacaaa
gccttcgaggacgagatgagcgggcgagccgcccacctgcagcagaccatcaaacaaggc
aaggacctggtggccgacaaccacttcggcgccgagaagatcaaggagcggatccgggac
atcgaggagcagtgggcagctctggagcgtctgtctgctgtgagaaaagcacgcctgcag
gcggcgtgcaaccaccaccagttccaggctgatgcagatgacatcgacacatggatgctg
gacgttctgcgcatcgtctccagcgtggacgtcggccatgacgagttctccgctcaggct
ctggtgaagaaacacaaagacgtcgcagaggagatcagcagctatcggcccgccatcgac
gctctgcatgagcaggcccagacgctgccgccggagagggccaactccgaggaggtccag
aaccggctggcgggcattgaagagcgctacaaggaggtggcagaactgacccggctcagg
aagcaggccctgcaggacgccctggcgctctacaagctgctgactgaagccagcgcctgc
gagctttggatcgacgagaaggagcaatggctcaacagcatggagatcccagagaaactg
gaagacctggaggtcatccagcaccggtttgagaatctggagccggagatgaacagccag
gcctcccgggtcgccgtggtgaaccaggtagccaggcagctgatccacagcggacatccc
agtgagagggagatcaagacccagcaggacaaactcaacaccaggtggagtcagttcaga
gacctggtggaccagaagaaggagatcctgaactcaactctgggagtccagaactaccac
ctggagtgtaatgagaccaagtcctggatcaaagagaagaccaaggtgattgagtccacg
caggagctgggcaacgatctgggcggagtcatggctctgcagaggaagctaacagggatg
gagcgggacctggttgccatcgaggacaaactgaaagacttggagaaagaggcggagggt
ttgtcttccgaacacccggagcagtacgcagcgatcaaaggacagctggctgagatcacc
agcgtctggaatgagatgaaggggacgttgaaaaaccgtgaggagtctctgggcgaggcc
agcaagctgcagcagttcctgcgagacttggacgacttccagtcatggttgtcccggacg
cagacggccatcgcctcggaggacatgccgaacactctggctgaggccgagaagctgctc
tcccagcacgaaaacatcaagaacgagatccgcaactatgaggaggactaccagaagatg
cgggacatgggcgagatggtgacgcaaggccagacggacgctcagtacatgttcctcagg
cagcgtcttcaggcgctggacaccggctggaacgagctgcacaagatgtgggagaaccga
cagaacctgctgtcccagtccaacacctaccagctgttcctgagggacaccaagcaggcc
gaggccttcctcaacaaccaggagtatgttctggctcacaccgagatgcccaccaccctg
gagggggccgaggccgccatcaagaagcaggaggacttcatgaccaccatggatgccagt
gaggaaaagatcagcggtgttgttgacacaggacgccgcctggttactgacggcaacatc
aacgccgagcgcattcaggagaaggtggactccatcgaccagagacacaagaaaaaccga
caggcagcaaaagatctgctgatgaagctgaaggacaacagagacctgcagaagttcctg
caggactgccaagagctgtccctgtggatcaacgagaaaatgctgaccgcccaggacctg
acgtacgacgaggccaggaacctccacagcaagtggctgaaacatcaggccttcatggca
gagctgcagtccaacaaggagtggctggataagattgaaaaggacggccaggcgctggca
gcagagaagccagagacggaggccatggtgaaggagaagctggcgtccctgaagaccatg
tgggaggtcctggagtccaccacccagaccaaggccaagtgtctgtttgatgccaacaag
gccgagctgttcacgcagagctgcgccgacctcgacaagtggctgaccggcctggacggc
cagctccagtccgacgactttggcaaagacctcacctccgttaacatcatgctgaagaag
cagcagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcagaga
cagtctcaggccctcagccaggaggggaaaggctccgacgaggtggaagggaggaggatc
accgtggagaagaagttccaggcgctgctggcgcctctgaagatgagacgcgacaacctg
atggcgtcccgcgagatccaccagttcaaccgagacgtggaggatgagatcctctgggtg
gaggagaggatgcctctggccacatctactgaccacggacacaacctgcagacggtgcag
ctgctcatcaagaagaaccagacgctgcagaaggagatccagggtcaccagcctcgattc
gacgacatctttgagcgcagccagcacgttctgagggccgacagccccacggcggaaccc
atccgccagaggctgaccgagctgcaggcgctgtgggatcagatcaagaaggagacggag
aagcggcattcccggctcagcgaggcccacgaggcccagcagtactacttcgacgccgcc
gaggccgaggcctggatgagcgagcaggagctgtacatgatgtcagaggagaaggccaag
gacgagcagagctccgtggccatgctgaagaagcaccagatcctggagcaggccgtggag
gattacgccgacaccgtccaccagctgtccagcaccagccggggcctggtggctgcaggc
caccctgacagcgagcgcatcggcatgcgtcagtctaaggtggataagctgtacgccggc
ctgaaggacctcgctgaagaacggcgcgggaagctggacgagcgtttccgactcttccag
ctcaacagggaggtggacgacttggagcagtggatcgcagagagggaggtggtggccggg
tcccatgagctgggacaggactacgaacacgtcacgatgctgcaggagcgattccgagaa
ttcgcccgtgacaccgggaacatcggccaggagcgcgtggacggcgtgaacaagcaggcg
gacgagctgatcaacgcgggccacagcgactccgccaccatcgccgagtggaaggacggc
ctgaacgaggcctgggccgacctgctggagctcatcgacacgcgcacgcagatcctcgcc
gcctcctacgagctccacaagttctaccacgacgccaaggagatcctgaaccgcatcctg
gacaaacaaaagaagctcccggaggagctgggccgggaccagaacacggtggagaccctg
cagaggatgcacaccaccttcgagcacgacattcaggctctggggacgcaggtccggcag
cttcaggaagacgccgtccgtctgcagtcggcgtacgccggagacaaagcggacgacatc
cagaagagagaaggagaggtcctggaggcctggaagaacctgctggaggcagcggagggc
cggcgggtcaagctggtggacacggccgacaagttccgcttcttcagcatggtgcgggac
ctgatgctgtggatggaggacgtgatccggctgatcgaggctcaggagaagcccagggac
gtgtcgtcggtggagctgctgatgaacaaccatcagggcatcaaggcggagatcgacgcc
cgaaacgacagcttcacggcctgcattgagctggggaaggcgctgctggcccggaaacac
tacgcttcagaggagattaaagagaagttgcttcagctgacagacaagaggaaagagatg
atcgataagtgggaggaccgatgggagtggctcagactggtgctggaggtgcaccagttc
tcccgggacgcgggcgtggccgaggcctggctgctggggcaggagccctacctgtccagc
agggagatggggcagagcgtggacgaggtggagaagctcatcaaacgccacgaagccttc
gagaagtccgccgccacctgggaggagcgcttctcggctctggagaggctgacgacgatg
gagctactggaagtgagaagaatgcaggaggaagaggagaagaagaggcaaccggccgag
gctcaggccgccgaggctgcagctcagagcagagacggcgagccggcgtcccagaacggg
ctgccgtccgagcaggagcccccccgggagagcgtggatgggggcgaggcagtgaacggg
gtgtgggagcccagcccctccgggtctcctggagcgtcccgtaaaggcaaacccagccag
gcggcgacgctgccagctaaaagccaacaggacgcccccacgtcgcagatggacggcttc
ctgcatcgcaaacatgagtgggagggtcacaacaagaaggcctccaacaggtcctggcac
aacgtctactgtgtgatcaaccagcaggagatgggcttctacaaggaccagaagagcgcc
agtcagggcatcccctaccacagcgagattcccatcagcctgaaggaggcgctgtgtgag
gtcgctgtggattacaagaagaagaaacacgtctttaagctaaagatctctgatgggaac
gagtatctcttccaagccaaagacgacgaggagatgaactcctggatctcagccatctct
gccgccgtggcgggggtcaaatcggaggtgacgcccagcggccacagcacgccggccccc
gcagctcgcgctcagacgctgccggcgacggtggcggcgacggcggcggagtcgagtcct
ggcaaacgggagaaagacaaggagaaacgcttcagcctcttcagcaagaagaaatag
DBGET
integrated database retrieval system
