Cyprinodon tularosa (White Sands pupfish): 119798788
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Entry
119798788 CDS
T07496
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul02010
ABC transporters
ctul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119798788 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119798788 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctul02000
]
119798788 (abca7)
Transporters [BR:
ctul02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119798788 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
119798788
NCBI-ProteinID:
XP_038164329
LinkDB
All DBs
Position
Unknown
AA seq
2367 aa
AA seq
DB search
MGFFRQLYLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQGQCHFPNKA
LPSVGTVPWIQSIICNINNPCFHSPTPGETPGQVGNFDNSILSRLFVDAQTVLSYSGNRS
FSTFQDLMGSVRLLGERFGSLPSLPVKECLRPRETFSSFLLTNASLSSSTVDQLMNARLD
FQAVITGLQMPLKALVCNETMLGQLLSVEGGAANMTALQMELCKLPADVLQDAERIFLSQ
LDGTKLLTRDRLIGSAEELRLISQAITSVSQELAVLIDDFSSLSSFAEMNEALSLLSPEN
RTALPRESFRAFSRIMCGHPKVGGERIPSLNWYEDNNIKSFLGRNGTEDVVPDGDNTTTP
FCKGLIQSLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVRQVIKEVNKTFEDLQILQDLN
DAWMEVGPQIKNYMETSVEIQLLKDLLRRPEIAVLINMRFENTTWTASRIARFLSTPSPD
VPRKPGAPPTWLDLYNNVGSSIAMLAQVTKCFSLDKMEGLDTEGQLIDRALQLLEDRQFW
AGVVFLLPNTSSSQLPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYIQDLVEKAVSYVLTGVKQNTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLSTGTLWLSWLISSLIPFLISAVLLIALLKWGDILPYS
DPTVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLTS
THRVFASFLSPVAFGFGCEYFSQYEEQGVGIRWFNLRASPVEGDTYSFTTSITMLYVDAF
IYALAAWYIEAVFPGQYGIPRPWYFIFQLNYWGGIPLEVGMPIPPAPAEQDEDYIETDPS
TMNLGVNIRNLVKIYKKGGKVAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
AGTVYVKGMDIRYDMDIIRKTLGVCPQHNVLFDMLTVEEHVWFYGCLKGLSEENVMAEIS
ALLEDVGLLHKRHDQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISKGKLCCCGSPLFLKSKLGSGYYLTVVKKE
ELSTSTPSNSSICTSASTSTNKLPSLVKDSESSLSEDTGLGSEETSSYLAALLALVQQHI
PGARLVEDSRRETVINLPQAAAKDGSLAVFLSKLDQKLVELGISSYGLSDSTLEEIFLRV
AEETGVDAASEPPSSMQPSVTRAEDQPEEPESGGKRTRKKEPQETDLLSGNGQGGVPLTG
WWLTWQQLRALFVKRWLYARRSRRGILAQIVLPAVFVLIALLFSLIVPPFGKYPELELQP
WMYGEQYTFFSNDAPGNPAMENLLEALLDQPGFGTKCMDKEEELNSTSHQCEAERGGYFM
RPQISYSTWQKLMRGNWSTDRPSPECQCSTEDTRRMLPDCPDGAGGIPPPQMKKATGDIL
QNLTTYNISDYLVKTYPQILKKSLKTKKWVNEFRYGGFSLGGSTTQNISEVQHLQDSVMA
IRTRYQVKQNSSLDHLLKKLPEFLGGMHSENNVKVWYNNKGWHAMVSFVNVMNNGLLRAS
LPPGAERRRHGITAYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFAMSFVPASFVLFLI
EERVSKAKHLQFVSGVQPILYWLANFVWDMLNYSVPAMMVVLIFICFQQQSYVSETNLPA
LILLLLLYGWSITPLMYPASFVFSIPSTAYVVLTSVNLFIGINGSIATFVLELFVDEHLN
EVNRILKKVFLIFPHFCLGRGLIDMAKNQALADAFQRLGSKQTLDPLQWDFVGKNLFAMA
AEGVIFFIFTILLQYKFFIYYRPWWKQPQLPPLGPEDEDVARERERVKSGKAHSDILTMI
DLSKVYKAGRKPAVDRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTQITHGEAFLSQH
SVLREMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVTKVAQWGVRKLGLT
QYAEQEAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGR
AVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLADIKADPESC
PIDTHLRKSFPIIELKERHQNVLQYQLPSHACCLADVFDVLGNNSEELGIVDFSVSQTTL
DQVFVSFAKEQTDDDCLTDVVISNGAPQLNPPIRINPPNIQPQQQTTSPQQKKSPQLPAQ
SPESNSKGSKPRKAKARKVSSNGETSGSVPLSRLPQTQEKPPELGSSNGGVQSESSKPHR
SNQREESSNNDPAALFIVGTNSQDSSL
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcaggcagctctacctcctcctgtggaaaaacatcacataccgcaggaga
aacaagatccagctgataattgagctcctctggccgctcttcctttttgtcatcctcatc
tctgttcgtcattcccaccctccttacaaacaaggccaatgtcacttcccaaacaaagcc
ttgccgtcggtaggcactgttccctggattcaaagcatcatctgcaacatcaataatccc
tgcttccacagcccaacgccgggggaaacaccgggccaagtgggaaactttgacaactcg
atattgtctcgtctttttgtggatgctcagacggttttgtcctacagtggcaaccgcagc
ttctccacctttcaggacctgatgggaagtgtccggctgctgggagaaagatttggatct
ctaccaagtttaccagttaaagaatgcctgagacccagggagaccttctccagttttctc
ctgaccaacgccagcctgtcgtcttcaactgtagaccagctgatgaatgcgcgccttgat
tttcaggctgtaattactggactccagatgccactgaaagccttagtgtgcaatgaaacc
atgctgggacagctgctgtcagtggagggaggagcagccaacatgacggctcttcagatg
gagctttgtaagcttccagctgatgtcctgcaggatgctgagcgcattttcctctctcag
cttgatgggaccaagttgcttacaagagaccgtctaattggcagcgctgaggagctgagg
ctcatcagtcaggccatcacctcagtatcccaggagctcgctgtccttatagatgacttc
tcctccctttccagttttgcagaaatgaacgaagctcttagtcttctgtctccagaaaat
cgaacagctctgcccagggagagtttcagggctttttcaagaatcatgtgcggccacccc
aaagttggcggcgaacgcatcccgtcgctcaactggtacgaagacaacaacatcaaatcg
ttcctgggcagaaatggtacagaggatgtagtcccagacggcgacaatacaacaacacct
ttttgcaaaggtttgatccaaagtctggagtcaaatcctctgtctcgcattgtatggcga
ggaattaaacccctgttcatcggaaagctgctctacacaccggacactcctgcagttcga
caagtcattaaagaggtgaacaaaacctttgaagacctccagattcttcaggatctgaat
gatgcctggatggaggtgggaccacaaatcaagaactacatggagaccagtgtggagatc
cagttgctaaaggatttgctgaggcgtccagaaattgcggttttgatcaacatgcgtttc
gaaaacacaacctggacggcctcacggatcgctcgcttcctctccactccctcaccagac
gtccccaggaaacctggagccccgcccacctggttggacctctacaataatgttggaagc
tctatcgccatgcttgcacaagtcaccaagtgctttagtttggataaaatggaggggctt
gacacggagggtcagctgattgacagagctctccagcttctggaggacagacagttttgg
gcaggtgtggttttccttctgcctaacacgtcctcatcgcagctcccgccccacgtcacc
tacaagatcagaatggacattgatgatgtgacccgcaccaataagataaaggacagattt
tgggatcctggtccagctgctgacccatttaacgacatgcgctacatttggggcggcttt
gtctatattcaggacctggtggagaaagctgtgagctacgttctgactggagttaaacag
aatactggcatctacatccagcagatgccctacccctgctatgtggacgatgtgttcctt
cgagtactaaaccgctccctacctctgttcatgactctggcgtggatctactcggtggcc
atgatcattaaaggtgtagtgtatgagaaggaggcgaggctgaaggaaaccatgaggatt
atgggtctgagcacaggaacattgtggctcagctggctcatcagcagcttgatcccgttc
ctcatttctgctgttctccttattgctctgctcaagtggggtgatatattgccgtacagc
gacccgactgtcgtcttttttttcctgatggcttttgccactgccaccatcatgcagtgt
tttctcatcagcaccttcttctccaaagccaacctggctgccgcctgtggggggctcatc
tacttcagcctctatctgccctacgttctgtgcgtcgcctggcgggaccacctcacctcc
acacacagagtctttgctagttttctgtctcctgtagcctttggttttggctgtgagtat
ttctctcagtacgaggaacaaggtgtggggatccggtggtttaacctgcgggccagccct
gtggagggcgacacgtacagctttaccacctccataaccatgctttacgtggacgccttt
atctacgccctcgcagcttggtacattgaagcggtgtttcctggtcagtatggcatcccc
aggccctggtacttcatctttcagctcaactactggggtgggattcctttagaagtcggc
atgccaatcccaccggccccagcagagcaagatgaagattatattgaaacagatcccagt
actatgaatcttggcgtgaacatcagaaacttggtgaaaatttacaagaaaggagggaaa
gtcgctgtcaaccatcttaacctgaagttttatgaaggccagatcacttccttccttggc
cacaacggagctggcaaaaccaccaccatatccgtcctaactgggctgttccctcccact
gctgggactgtgtatgtcaagggcatggacatccgctacgacatggacatcatccgaaag
acgttgggggtgtgtccacagcacaatgtcctctttgacatgctcacagtggaggagcat
gtgtggttttatggttgtctgaagggcttgtctgaagaaaatgtgatggctgaaataagc
gctttgctggaggacgtcggccttttgcacaaacgacatgatcagaccaaaaacctctcc
ggcggcatgcagagaaagttgtctgttgcgatcgcttttgtggggggctccaaggtggtt
gtcctggatgagcccactgcaggcgttgacccgtattcccgcagagggatctgggatctg
ttgctcaaatatcgcaaagatcgtaccatcattctatccactcactacatggatgaggcc
gagctgctaggcgaccgcatcgccatcatctccaaggggaagctctgctgctgcggatcg
ccgctctttctcaagtccaagctgggatctggttactacctcactgtggtgaagaaggaa
gagctaagcaccagcactcccagtaattccagtatctgcaccagtgccagcaccagcacc
aacaagctcccctctttagtaaaggacagtgagtcatccctaagtgaagacactggactg
gggagtgaggagaccagctcctaccttgcagccttgctggcactggtgcagcagcacatc
ccaggtgccaggctagtggaagactctagaagagaaactgtgatcaacttaccgcaagca
gctgccaaagatggcagtcttgctgtcttcctttctaaactggaccagaagcttgtagag
ctgggcatcagcagctacggcctgtcagacagcacgctagaggagatctttcttcgagtg
gcggaggaaactggtgtggatgctgcatcagaacctcctagtagcatgcagccatccgtg
accagagctgaggatcaaccagaagaaccagagtcaggagggaaaagaactcgtaagaaa
gaaccacaggaaacggacctgctgagtgggaatggccaaggaggcgttcccctgacgggc
tggtggctgacgtggcagcagctcagagctctctttgtcaaacgctggctttacgctcgg
aggagccgcagagggattttagctcagattgttttgcctgctgtgtttgttctgatcgct
ctgctcttcagcctcattgttcctccgtttgggaaatacccggagcttgagctgcagcct
tggatgtacggggagcagtacaccttcttcagcaatgatgctcctggtaacccagccatg
gagaacctgctggaagctttgctggaccagccagggtttggcaccaagtgcatggataaa
gaggaggagcttaacagcacaagtcatcagtgtgaagctgagaggggcggctacttcatg
cggcctcagatatcgtactccacctggcagaaactgatgcgagggaactggagcacagac
cgaccttcaccagaatgtcagtgcagcacagaggatacccgccggatgcttcctgattgc
ccagacggtgctggagggattcctcctccgcagatgaaaaaagccactggagatattctt
cagaatctgacaacgtacaacatctcagattacctagttaagacctatccgcaaatcctc
aagaaaagcttaaaaacgaagaagtgggtgaacgagttcagatatggaggcttctctctt
ggaggcagcaccacccagaatatatctgaggtccagcatctccaggactctgtcatggca
atcaggactcgttaccaagtcaaacagaacagttcactggaccacctgctgaagaagctg
cctgaatttttgggaggaatgcacagtgaaaacaacgtgaaggtgtggtataacaacaag
ggctggcacgccatggtgtcatttgtcaatgtgatgaataacggcctgctgagagcgagt
cttccaccaggagcagagcggaggagacacggcatcactgcttataatcacccactcaac
ctcaccaaggagcaacttactgagatagcaatgatgaccacatcagtggatgttttggtg
tccatctgtgtaatcttcgccatgtcctttgtgccggccagttttgtcctcttcctgatt
gaggaacgagtcagtaaagccaaacatctgcagtttgtcagcggggtccaaccgattctc
tactggttagccaacttcgtctgggacatgttgaactattctgtcccggctatgatggtg
gtgctgatcttcatctgtttccagcaacagtcgtatgtctcagagaccaacctgccagct
ctaatccttctgctgctcctctatgggtggtccataactcctctgatgtacccagcatct
tttgttttctccatacctagcacagcttatgtggttctgacctccgtcaacctctttatt
ggtattaatgggagcatcgccaccttcgtactggagttgtttgtagatgagcatctgaat
gaggtcaacaggatcttaaagaaagtgtttttgattttcccacatttctgcttgggccga
ggtctcatcgacatggctaagaaccaagccctggccgacgccttccagagactaggaagc
aaacagactcttgacccccttcagtgggactttgttgggaagaatctgtttgcaatggca
gctgaaggtgttatcttcttcatcttcaccattctcttgcagtacaagtttttcatttac
tataggccgtggtggaaacaacctcagcttcctcctctgggtccagaggatgaagacgtg
gcgagagagcgtgagagagttaaaagtggcaaagcccactctgatatcctcaccatgata
gatctgagcaaggtttacaaagcaggaagaaagccagctgtggatcggctttgcctcggg
attccccgcagtgagtgtttcggcctgctaggggtaaacggagctggaaaaacatctacg
ttccgcatgctgactggagatacacagatcacacacggagaggctttcctcagccagcat
agtgtgctgagagagatggagcgggtccaccagctgatgggttactgtccacagtttgat
gctatcagtgatctgctgacgggtcgggaacatctggagctctatgctcgcctgaggggg
gtgccagaggagtctgtcactaaggtggcgcagtggggggtgaggaagctggggttgact
cagtatgctgaacaggaggctggaggatacagcggagggaacaagaggaaactttccacg
gctatttccctcattggggctcctccagttatattcctggatgagcctaccactgggatg
gacccaaaagcaaaaaggtttttgtggaactgcatccttagtgtaactaaagaaggcaga
gctgttgtactcacctcccacagtatggaagagtgtgaggcgctgtgcactaggatggcc
atcatggtgaacggcagatttcagtgtctggggtccgttcagcacctgaagaaccgattt
ggagacggatacaccatcattctccgtctggcggacattaaagcggacccagagtcctgt
cctatcgacacccacctgaggaaatcttttcccatcattgagttgaaggagagacatcag
aacgtgctgcagtaccagctgccatcgcacgcctgctgccttgccgacgtctttgatgtt
ctagggaacaactctgaggagcttggcatcgtggacttctccgtctcgcagacaaccctt
gatcaggtttttgtcagctttgcaaaggagcagacagatgatgactgcctcacagacgtg
gtaatcagtaatggcgctccacagctaaaccctcccatcagaataaatcctcccaacatt
cagcctcaacaacaaacaacatcccctcagcagaagaaatctccacagcttcctgcccaa
tcacctgaaagcaattcgaaaggaagcaaaccgagaaaagccaaagccagaaaggtcagt
tccaacggggaaacgagcggcagcgtgcctctgagcagattacctcagacacaagaaaag
cctccagagttgggcagcagcaacggtggagttcagagcgagtccagcaaacctcacagg
tcaaatcaaagagaggagagctccaataacgatcctgctgcgctctttatagtcggcacc
aactcacaggacagctcgctgtga
DBGET
integrated database retrieval system
