Entry |
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Name |
(RefSeq) aggrecan core protein-like
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KO |
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Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
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Brite |
KEGG Orthology (KO) [BR:ctul00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:ctul00535]
119798828
00536 Glycosaminoglycan binding proteins [BR:ctul00536]
119798828
04091 Lectins [BR:ctul04091]
119798828
Proteoglycans [BR:ctul00535]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
119798828
Glycosaminoglycan binding proteins [BR:ctul00536]
Hyaluronan
Extracellular matrix or blood plasma proteins
119798828
Lectins [BR:ctul04091]
C-Type lectins
Lecticans
119798828
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1552 aa
MLKWTVLLSLCICITSAAFENLFEQYSIMDPEEVLSVTIPLQGKQRPLLGDNLLLPCYFE
DHTIEDPGAPPFDPLSYRIVWSHVTKEKVSTILVALEGRVRIGEDYVDRVQLQSYPQYPT
DASIEISELHSSDTGVYRCEVQKHIEDNYDTVDVHVQGIVFHYRAVMGRYALTFEQAKVA
CAMNSAVIASPEQLQAAFDDGFHQCDAGWLSDQTVRYPIHEPRMNCYGDKEELPGVRTYG
VRDLNETYDAYCFADRMTGRVFHTTSAEKFTFSEAEFACSHQGAQLATTGQLYLAWQGGM
DVCNAGWLADGSVRYPINIRRPQCGGGLLGVRTVYLHTNQTGYPHPNSRYDAFCYTESPD
DEGSGIEGGNDVLIVTTETKNPEVLLGKTTTETEAVGEVVTLEPFDLNSTYSESPTKLPT
PQLTNVTEISFDLIKAVTNQPAVAREPSNPSVNSSSGVVFHHRSPTGSYAFTFVEAQLAC
QGVGGLIATPQQLQEAYEAGYHQCEAGWLLDQTVRYPIAFTQEKCAGDLQDSPGVRTYGR
RPADERYDVYCYTEGKKGEVFHVGSAEGFTYDEAISACENQSAVLASTAELYAAWKKGLD
KCRAGWLLDHSVRYPINSPRPGCGGGRVGVHTYYSKPNQTYYPEPHARFDAYCLRADFLP
GANQTAVEIQKTLPNVTSVRDSLRPDFSSIVPPIPVEISGSGSGSGDFDSGHEGGQSEEK
HISKDQVTSGDLPGSGDQISSGDLPGSGDRVTSGDLPGSGDQISSGDLSGSGDRVTSGDL
SGSGNQVTSGYLSVTSGDLSGSGNQVTSGDLSGSGNQVTSGDLPGSGDQISFGDLSGSGD
RVTSGDLPGSGDQVTSGDLPCSGEQVTSGDQTGSGDQVTSGDQTGSGDQVTSGDLSGSGH
QVTSGDISGSGDQVSAVLPSGRSGLGSAIDPESGHIEEGSGITVVFSGADSFASTERSSS
GEPQEAEEGSTELFIYPWSRAVSGELSGSGDMSGFGSGSGLDSVSSFLSGSASGSEIEQS
GHISGSGDAHIFLIDEKLVDPTTAMEEFMLSGGPLTFSGSGDFPGSGIHSADNSGSSSGI
ETDPFNSVTFMGSGFTELFVSPSGEHEEASGSLFYSFGEGGDGTFSGFGISSLSFDSGSS
FSGSGAYTDREDGVTFLTQGQRTEITGDDKVPSEQREYLIEYSGEASGFYSGDGEKDLSF
TSEISSSEEFSNLSMVALLAPSVDQVLTEPITETEDSTHEAKLIENSRVHVTPGPETVPA
GLAAPSAEAKPAFVQTPEVIKASNPCEPNPCGNASCILEEGDAHCYEAEVCHPNPCANGA
TCVESSDSFKCLCLPSYRGERCDIEEQWCEDGWTKFQGNCYLHFSEREEWLDAEKRCRDL
NAHLVSIITPEEQQFVSANMQDYQWIGLNDKTVENDFQWTDGTPLQYENWKLNQPDNYFN
SKEDCVVMIWHENGKWNDVPCNYHLPFTCKKGPVSCGAPPVVKHAHTFGKRRLVYPVNSI
IRYQCNPGFRQRHLPVVRCQTDGQWEKPRVECTDVKARNRIKERSNRNNNLI |
NT seq |
4659 nt +upstreamnt +downstreamnt
atgttaaagtggactgtgctcctgtctttatgtatatgcatcacttctgcagcatttgaa
aatctttttgaacaatactccattatggatccagaggaagtcctgagtgtgaccattcct
ctgcaggggaaacagcgccctctactgggagacaatctgttgctgccgtgttactttgag
gatcacactatagaagaccctggtgctccgccctttgatcccctatcctatcgcattgtt
tggagccatgtcactaaagaaaaggtttcgaccatcctggtggctttggagggacgagtc
cgcatcggtgaagattatgtggacagagttcaactacagagctatccccaatacccaaca
gatgccagtatcgagatttctgagctgcattccagtgacactggggtgtatcgctgtgaa
gttcagaagcacattgaggataactacgacactgtcgatgtccatgttcaaggtattgtg
ttccactaccgggctgtaatgggccgctacgctttgacctttgagcaagcaaaggtagca
tgtgccatgaacagtgcagtcattgcttctcctgagcaacttcaagcagcatttgatgat
ggcttccaccagtgtgatgctggctggttgtctgatcaaacagtgaggtatcctattcat
gaaccccgtatgaactgctatggggacaaagaagagcttcctggtgtcaggacctatgga
gtaagagacctcaatgagacatatgatgcttactgcttcgcagataggatgacaggcaga
gttttccacacaacttctgctgagaagtttacattttctgaggctgagtttgcgtgctca
caccagggagctcagctagccaccacaggtcagctgtaccttgcatggcaggggggtatg
gatgtctgcaacgctggctggctggcagatgggagcgtccgctaccccatcaacattcgg
cgaccgcagtgtggagggggtttactgggggtccgaactgtttatctacacacaaaccag
acaggatatccacatcctaactcccgctatgatgccttctgttacactgaatccccagat
gatgagggttcaggcatagaagggggaaacgatgttctgattgtaaccacagagacaaaa
aatccagaggtgcttttgggtaagacgaccacagagaccgaagcggttggggaggtcgta
actctggaaccgtttgatctgaactccacctacagtgaaagccccaccaagctgccaact
cctcagctaacaaatgtcacagagatctcctttgacctgattaaggctgtcaccaaccag
ccagctgtcgccagagagcccagcaatccctctgtcaactcttcatcaggtgtggtcttt
catcatcgctcacctactgggagttatgccttcacattcgtcgaggcccagttagcttgc
caaggtgttggaggcttaatagcaacaccacagcagctacaggaagcttatgaggctgga
tatcatcaatgtgaagcaggttggcttttggaccagactgtgagatatcccattgcgttt
actcaagaaaagtgtgctggagaccttcaagattctcctggagttcggacatatggccgt
agaccagcagatgagagatatgatgtttactgctacactgaggggaaaaaaggagaggtt
ttccatgtgggttctgctgagggtttcacctacgatgaggctatttctgcttgcgaaaac
caaagcgcagtgctggcctcaactgctgagctttatgcagcatggaaaaagggtttggac
aagtgtcgtgcaggctggctactagatcacagtgttcgctatcctatcaacagcccccgc
cctggatgtggagggggaagagtaggggtccacacttactactcaaagccaaaccagaca
tattatcccgaaccacatgccagatttgatgcatattgtttgagagctgactttctgcct
ggagcaaatcaaactgcagtagagatccagaaaactctacctaatgtgacatcagttaga
gactcattaaggcccgatttttcctctattgttcctcccatccctgtggaaatttctggt
tctggctctggttcaggagactttgattcaggccatgaaggaggacagtctgaagaaaag
catatctctaaagaccaggttacctctggagatctgcccggttctggagatcagatttcc
tctggagatctgcctggttctggagaccgagttacctctggagatctgcctggttctgga
gaccagatttcctctggagatctgtctggttctggagaccgagttacctctggggatctg
tctggttctggaaaccaggttacctctgggtatctgtctgttacctctggggatctgtct
ggttctggaaaccaggttacctctggggatctgtctggttctggaaaccaggttacctct
ggagatctgcctggttctggagatcagatttcctttggagatctctctggttctggagac
cgagttacctctggagatctgcctggttcaggagaccaggttacctctggagatctgcct
tgttctggagagcaggttacctctggagatcagactggttctggagaccaggttacctct
ggagatcagactggttctggagaccaggttacctctggagatctgtctggttctggacac
caggttacctctggagatatttctggttctggagaccaggttagtgctgtgctgcccagt
ggaagatcaggtttgggcagtgcaattgatccagagtcaggacatattgaagaaggatct
ggcatcacagtggttttctctggagctgacagctttgcatcaacagaacgctcttcttca
ggagaacctcaagaggccgaagagggaagcacagaactttttatctacccttggtctaga
gctgtttctggagagcttagtggaagtggagatatgtccgggtttggatctggatcagga
ttggattcggtgagtagttttctatcaggatctgcctctggaagtgaaattgaacaatca
ggacacatttctggaagtggagatgctcacatttttttgatagatgaaaaacttgtggat
ccaactactgccatggaggagttcatgcttagtggaggtccactgactttcagcggttct
ggagactttccaggatctgggattcatagtgctgataacagtgggtcaagctctggtatt
gaaactgacccttttaatagtgtgacctttatgggttcaggctttactgaactttttgtg
tcaccatctggagagcatgaagaagcttctggcagtttattctacagctttggagaggga
ggcgatggaacattttctggatttggaatctcaagtttaagttttgattctggatcaagt
ttctctggatctggagcatatacagacagagaagatggtgttacatttctcactcagggt
caaaggacagaaataactggagatgataaagttccttcagaacaaagagaatacttaata
gaatacagtggagaagcaagtggtttctactctggtgatggagaaaaggacctttccttc
acctcagagatttcttcttcagaagaattttccaatctatcgatggtggctttacttgct
ccatcagtcgaccaagtacttacagagcccatcacagaaacagaggacagcacacatgaa
gccaaactgatagagaactccagagttcatgtaactccaggtccagaaacagtgcctgca
ggactagctgctccttctgcagaagccaagccagcttttgtgcaaacaccagaggtgata
aaagcctcaaatccatgtgaaccaaacccttgcggtaatgcttcatgcatattagaggaa
ggagatgctcactgctatgaggcagaagtgtgccatccaaacccttgtgccaatggagcc
acctgtgtggagagttcagactctttcaaatgcttatgcctgcccagctacagaggggaa
cgctgtgatatcgaggagcagtggtgtgaagatggctggacgaagtttcagggaaactgc
tacctgcacttctctgaaagggaggagtggctagatgcagagaaacgctgccgtgacttg
aatgcacaccttgtcagcatcatcacaccagaggagcaacagtttgttagcgcaaatatg
caggattaccagtggattggcctgaatgacaaaacagtggagaatgatttccagtggact
gatggcactccgctgcaatacgagaactggaagctgaatcagcctgataactactttaat
tcaaaagaggactgtgtggtgatgatctggcatgagaacggcaaatggaacgatgttccc
tgcaactatcacctgcccttcacctgcaagaaaggaccagtgtcctgtggagccccacca
gtggtgaaacacgctcatacttttggaaagaggaggctggtgtatcctgtcaattccatc
atccgttatcagtgcaacccaggatttagacagcgccatctaccagtggtccggtgccag
actgacgggcagtgggagaaaccaagagtggagtgtactgatgttaaagccaggaacaga
ataaaggaaagaagcaacaggaataacaacttaatttag |