Cyprinodon tularosa (White Sands pupfish): 119799220
Help
Entry
119799220 CDS
T07496
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04110
Cell cycle
ctul04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119799220 (smc1b)
04114 Oocyte meiosis
119799220 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119799220 (smc1b)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119799220 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
119799220 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
AAA_13
Motif
Other DBs
NCBI-GeneID:
119799220
NCBI-ProteinID:
XP_038164961
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MGYLKLIEIENFKSWRGKQIIGPFMRFNCIIGPNGSGKSNIMDALSFATGERVASLRVKH
LSDLIHGAHIGKPVSDTALVALHICDDEDHERIFSRTIAGHSSSYQINGAQVSYATYIKE
LEKVGIVTKAQNILVFQGAVEAIALKEPKERTKMLECICQSQQYAAEYQMKKEALLKARE
DSKFHFNNKKSAIVEKKQVSQEKEEALKYQALVDDLNHKRLKLNLVELFYNEKSISAISE
TLREKQEDAAGKTDELVTAEQRVKAHKKEHGRLSREQQHLEKEIRGQEHILAQSSSQYVK
AKVNTSHHIKKAAEISAAVMRNKKKLESKEQELEEGQQEMAELEKTWRRYERQTQEEGVA
KGRDISLDEDQLDQYKELKRLAQKQAAVLFQQAEKLQWEVTADSEKLAFEQRRKKEKEAA
IKSCQTRQEDLMSRAEKLEEYTQKCKDSLEDFDQRGASLSAELQHVSQRSRELEEELLQV
TEELANARLDSHESRHQQQRREMLEKLRRLYPETVFGRLSDLCSPVHKKYQLAVTKVFGS
NMNAIVVATEKVARECIGFLKEQRGEPETFLPVDYLVVKTLNQRLREIPNAKMVVDVVRV
TAGPGAALLEKVMQYVCGNALVCETMKVARSVAFDRQERVMTVTLDGTLFKTSGVISGGS
SDLRTKARCWQEKDMIRLKEHKDELMHELRDLVRLRRKESSLKQILAEAQGAQSRLKYST
TDLEILRDKAIPDCRAEISCLKSELSNLKCQIQMQQESLEAKDAEIKRIRQQIDQIEDEV
FADFCAQIGVGSIREFEQEHLKLQEEVDKKRLEFESQRDRLKAQLEYNKEHLVQEKKKLH
SMEDKVSKEEQAIAESKEDEKKLLQVVEEGQNKLQEMKNQLLLRKKQVASLKAELSQKTQ
HLQEINKELTKLQREVMSAETALEQKRMARHNMLLACKIQDLPISLLVGSLDEISQVQEL
GTDSESTTATMDIYEREAQLTIDYSGLEEELTILAEDEEIDAQMEKLKESVSSAEKVLSS
TSTPNLKALEKKREVKDKLEAVTEAFNASTKVVQKCNKEFEEVKTQRLKLFNQCFEHVVL
VIDRIYKKICRNKGAQAILSAENPEEPYLGGINYHCVAPGKRFMSMDNLSGGEKAIAALA
LLFAINSFRPAPFFILDEVDAALDNTNIGKVTSFIREESKVNMQIIVISLKEEFFSKADA
LLGVCSYLDHCMFSRILTLDLRPYPLAEEENDKARAEEARTDTRLESSTLKKTP
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctcaagctaattgaaatagaaaactttaagtcatggcgtgggaaacaaatt
attggaccttttatgcgattcaattgtattataggaccaaatggttctggtaagtccaac
atcatggatgcgctgagtttcgccacaggcgagcgggtcgcctctcttcgggtgaagcac
ctgagtgaccttatccacggagcccacatcggtaaacctgtgtccgacaccgccctggtg
gccctccacatctgcgatgatgaggaccatgagagaatcttttcccgtacaatagcaggt
cactcttcatcataccaaattaatggagctcaggtttcatatgcaacctacatcaaggag
cttgaaaaggtcgggattgtgaccaaagctcagaacattctggtgttccagggggcagtg
gaggccattgctctgaaggagccaaaggagaggactaagatgttagagtgcatctgtcag
tcccagcagtacgctgcagaataccagatgaagaaggaagccctgctgaaggctagagag
gacagcaagtttcacttcaacaacaagaaatctgccatagtggaaaagaaacaggtctcc
caagaaaaagaagaggccctgaagtaccaggccttggtggatgacctgaaccacaaacgt
ctgaagctgaatctggttgagcttttttataacgagaagagcatcagcgccattagtgag
acgctgagggagaaacaagaggatgcagcgggaaagaccgacgagttggttactgcagag
caacgcgtcaaagcccacaaaaaagagcacggacgtctcagcagagagcagcagcacctg
gaaaaagaaatacggggtcaggagcacatcctggctcagtccagctcgcagtacgtcaaa
gccaaagtgaacacatctcatcacataaagaaggctgcagagatcagcgccgctgtgatg
aggaacaagaagaagttggaaagtaaagagcaggagctggaagaaggtcagcaggaaatg
gctgagcttgagaagacgtggaggaggtatgagaggcagacccaggaagaaggagtcgca
aagggaagagacatcagtctagatgaggatcagttagatcaatataaggagctgaagagg
ttagcccagaagcaggcggctgtcctcttccagcaggctgagaagctacagtgggaagtg
acggcagacagtgaaaagctggcttttgagcagcgcagaaagaaggaaaaagaggctgcc
atcaaaagctgccaaactcgtcaagaagatctgatgagtagagctgagaaactggaggag
tacacccagaaatgcaaggattcccttgaagattttgatcagcggggggcgagtctgtct
gcagagcttcagcatgtgtctcagcgaagcagagagctggaggaggagctgctgcaggtg
acggaggaactagccaacgctcgtctggacagccacgagagcagacaccagcagcagcgc
cgagaaatgctagaaaagctgcgccgactctacccagaaactgtttttgggcgactgtct
gatctctgcagcccagtccataagaaataccagctggctgttaccaaagtgtttggctcc
aacatgaatgcaatcgttgtggcgactgagaaggtcgcccgcgaatgcatcggcttcctc
aaggagcagcgaggcgagccagagacctttctgcccgtcgactacctggtggtgaaaaca
ctgaatcaacgactcagagagatcccaaatgccaagatggttgtggatgtggtgcgggtt
actgccggcccaggcgctgctctgctggaaaaagtgatgcagtacgtctgcggcaacgcc
ttggtgtgtgaaaccatgaaagttgccaggagtgtggcctttgacagacaggaacgagtt
atgactgtcaccttggatgggacgctgtttaaaacttcaggcgtgatctctggaggttcc
agcgatctgcggaccaaagctcgctgctggcaggagaaggacatgatccgtctgaaggaa
cacaaggacgaactgatgcacgagttacgggacttagtgaggctcagaaggaaggagtcc
agtctaaagcagatcttggctgaggctcagggagctcagagccgtctgaagtacagcaca
accgatttggaaatccttcgggacaaagccatccctgactgcagagcggaaatctcctgc
ctgaagagtgagctatcaaaccttaagtgtcagattcagatgcagcaggagagtctggaa
gcaaaagacgcagagataaaaagaatcagacagcagatcgatcagatcgaggatgaggtg
tttgcagacttctgtgcccagattggtgtgggaagcattagagagtttgaacaggagcac
ctaaagctgcaggaagaggtcgacaagaaacgcctggagtttgaaagtcagcgcgaccgc
ttgaaagcgcagctggaatataataaggaacatcttgtgcaggagaagaagaagctgcac
tcaatggaggacaaagttagcaaggaggagcaggccattgctgaaagcaaagaggatgag
aagaagcttctgcaggtagtagaggagggtcagaataagcttcaggagatgaagaaccag
cttctccttagaaaaaaacaggtggcttcattgaaagctgagctcagccaaaaaactcaa
cacctacaggagatcaacaaggagctgaccaaacttcagcgagaggtcatgtctgctgag
acggccctggaacagaagcgcatggctcgacacaacatgctgctcgcctgcaaaatccag
gacctgccgatcagtctgctagtgggcagcctggacgagatcagccaagtgcaggagctt
ggaacagattcagagagcaccacagccaccatggatatatacgaaagagaggcgcagctc
accatcgactattcagggctggaggaagagctcacgattttggctgaagatgaagagata
gacgctcagatggagaagctgaaggagtctgtgtcctctgcagaaaaagtgctgagttct
acttccacccctaacctgaaggctctggagaagaagagggaggtgaaagacaagttggag
gcagtgactgaagctttcaatgcgagcaccaaagtagtccaaaagtgcaacaaggagttt
gaggaagtcaaaactcagcgcctcaagctcttcaatcagtgttttgaacacgtggtgctc
gtaatcgatcgcatctataaaaaaatatgcagaaacaagggagcccaggccattctgagt
gctgagaatcctgaggaaccatatttaggcggcatcaactaccactgtgtggctccaggg
aagcgcttcatgtctatggacaatctgtctggtggagaaaaagccatcgctgctctggct
ttgctgtttgctataaatagcttccgtccggctcctttcttcatcctggatgaggtggat
gcagccctggacaacactaacattggcaaggtgaccagcttcatcagagaggagtccaaa
gtgaacatgcagatcattgtcatttccctgaaggaggaatttttctccaaagctgatgct
cttcttggagtctgctcctatcttgatcactgcatgtttagtcgcattttgaccctggac
ctgcgtccctacccgctggctgaagaggaaaacgacaaagcaagagctgaggaggccaga
accgacacaaggctggagtcttctaccctgaaaaagactccatga
DBGET
integrated database retrieval system
