KEGG   Cyprinodon tularosa (White Sands pupfish): 119799371
Entry
119799371         CDS       T07496                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ctul01009]
    119799371 (kdm5bb)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ctul03036]
    119799371 (kdm5bb)
Enzymes [BR:ctul01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     119799371 (kdm5bb)
Protein phosphatases and associated proteins [BR:ctul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119799371 (kdm5bb)
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119799371 (kdm5bb)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHDvar_NSD PHD_4
Other DBs
NCBI-GeneID: 119799371
NCBI-ProteinID: XP_038165143
LinkDB
Position
Unknown
AA seq 1548 aa
MSLPRPDEFKPPPECPVFEPSWEEFRDPYAFINKIRPIAEKTGICKVRPPPDWQPPFACD
VDKLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCTLKIPHVERKILDLYKLNKLV
ADEGGFDIVCQDRRWTKIAVQMGFSPGKAVGSHLRGHYERILYPYNLFQSGANLLAQETA
SKLMRLEADPDHEKCVQKTDQPAEDKDSSEPKLQEQIQRPPAPTPDASPSARRAKRMKIE
TTCVKTEPGEMGDSKPNLRRRMGSIVVKQEPGFLPPAEKPIPILVKQEPVEFKEPIMEAD
KFKSRYKKMIPLVPPSPVDLVVCLVCGSGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKG
DWRCPKCLAQECSKPHEAFGFEQAHRDYSLRAFGQMADAFKSDYFNMPVHMVPMELVEKE
FWRLVGAIEEDVTVEYGADIASKEFGSGFPIPNGKFKVSPADEKYLKCGWNLNNLAMMNP
SVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQ
LEKVMKKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRAYHSG
FNQGFNFAEAVNFCTVDWMPLGRQCVDHYRLLHRYNVFSHDEMVCNMATKAGTLNVVLAS
AVHKDMALMIKEEQELRDKVKKMGVVNCKEAKYDNLQDDERQCATCRTTCYLSAITCPCR
PGVLVCLYHINNLCSCPVSNYVLNYRYTMDDLFPMMNAVKQRAELYDEWAFRVTATLEAR
LEKKKGLPVFRSLLAESESRLFPDNDLLRRLRLVTQDAEKCASVAQQLLNGKKQTRYRCG
SGRSRSQLTVEELSSFVRQLYNLCCSLPQAPQLKELLNRIEDFQQHSEKVLAEESPSVAE
IQSLLDVSFDFDVDLPELPLLRERLEQARWLEAVQGASSQPATLTLEAMRRLIDQGVGLA
PHPSVEKAMARLQEQLTLSEHWEDKASSLLQARPPHSIETLSAAAEQASVIPAHLPNCLL
LKDTIRKAQEWLQEAEELQVSGCVMTADSLSDMVLRGQAIQVQLEPLERLEYLLANAQEW
KESAAATFLLKDSSLTLLEVLCPSFEVGTLSTSKRKAKKGKEYPKNNKKKPARLNSLREV
EKALSESTDSTSAMATLEELRVREMETFFNLRAANESKLLPTADCMDLKVCFCQKAPMGA
MLQCELCRDAFHSVCVRDPSDSFETQPWLCPHCQRSEKPPLSKVFSLLTSLRSVGVRLPE
GDALNYLVDRTLNWQQRTQQILTDCHLPELEERPETPPTLTHWVSGCDNTHTNTQAPCLT
PEWNRTSHAQTVFYTEQRCIPLQGLNSELEELMVEGLLLQVSLPQVHSLYHILLDRANSQ
HPNRPASPPKEEPSDQGKHMQFISQGTNMALNQDGSTSTRDTMTPSERKAKRRLERGGLP
DAEPRGRDKKHSHKRQKVNKKKPQRRPASTSSSPRSDFSQSDDSDEEMAVCPAESCLLPE
GDEVDWVQCDGRCNQWFHQVCVGVTPEMAEKEDYVCVSCTLNDRQIRK
NT seq 4647 nt   +upstreamnt  +downstreamnt
atgagcctgcctcggccggacgagttcaagcctcctccagagtgcccggtcttcgagccc
agctgggaagaatttcgagatccttatgcttttatcaacaagatcagacccatcgcagaa
aagaccgggatctgcaaagtccggccgccgccggactggcagccaccatttgcctgcgat
gttgacaagcttcactttgttcctcggatccagcggctcaatgaactggaggcacagacg
agggtcaagctcaactttttggaccagattgccaaattttgggatttgcagggatgtacc
ctgaagatccctcatgtggagaggaaaattttagacttatataaactaaacaagctcgtt
gcagatgagggtggatttgacatcgtctgccaggacaggcgttggacaaagattgcagtt
caaatgggtttctctcctggcaaagctgtgggctcccacctgcgagggcattacgagaga
atcctctatccctacaatctgtttcagagcggagctaacctgctggcacaagaaacagct
tccaaactgatgcgtttggaggctgatcctgatcatgaaaagtgtgttcaaaagaccgac
cagccagcagaagacaaagatagcagcgagcccaagctgcaggagcagatccagaggccg
ccggctcccactcctgatgccagccccagtgctcgccgagccaagcgcatgaagatcgag
acgacctgtgtaaagactgagccaggtgagatgggtgatagcaagcccaatctgaggagg
aggatgggctctattgttgtcaagcaagaaccaggtttcctaccgcctgccgaaaaaccc
atcccaattctagtgaaacaggaaccggttgagtttaaggaaccaataatggaagcagac
aaattcaagtctcgctacaagaagatgattcctctcgttcctccaagtccagtggatctg
gtagtgtgtctggtgtgtggcagcggaggcgacgaggaccggctgctgctgtgtgacggc
tgtgacgacagctaccacaccttctgtctgatccctccgctgcacgacgtccctaaagga
gactggaggtgccccaagtgtctggctcaggaatgcagcaaaccgcatgaggcgttcggg
tttgaacaggcacacagggactattctctgcgtgcattcgggcaaatggcagatgctttc
aaatccgactacttcaacatgccggttcacatggtacccatggagctggtagagaaggag
ttttggcgcctggttggagccattgaggaggatgttactgtagagtatggagctgatatt
gcctcgaaggagtttgggagtggattccccatccccaatggaaaatttaaggtttcccca
gcagatgagaaatacctcaaatgtggctggaatctgaacaatctggcaatgatgaaccca
tcagttctgactcatgtgacagctgacatctgtgggatgacgctgccctggctttacgtc
ggcatgtgcttttcctccttctgctggcacatcgaggatcactggagctactccatcaac
tacttgcactggggggaacctaagacctggtatggcgctcctggttttgctgccgagcag
ctggagaaggttatgaagaagctggctccagagctgtttgactctcagcctgatctcctg
caccagctggtcaccatcatgaaccccaacacactgatggcacacggagtcccgatttac
aggactaaccagtgcgctggtgagtttgtcatcacgtttccccgagcttatcacagcggc
tttaatcagggctttaactttgccgaggccgtcaacttctgcactgtggactggatgccc
cttggcaggcagtgtgtggaccactaccgtctgctgcatcggtacaacgtcttttcccac
gatgagatggtgtgcaatatggccactaaagcaggcacacttaatgtggtattggcctca
gccgtccacaaggacatggccctcatgatcaaagaagagcaggaactaagggacaaagtc
aagaaaatgggtgtggtgaattgcaaggaggcaaaatatgataatctccaagatgatgag
cggcagtgcgccacatgcaggaccacctgctacctctctgccatcacctgcccctgtaga
ccaggagtcctggtctgtctgtaccacatcaacaacctctgctcctgccctgtctccaat
tacgttctcaactacagatacaccatggatgacctgttccccatgatgaacgccgtgaag
cagcgagctgagctctatgatgaatgggcttttcgtgtgacagcgaccctggaggctagg
ctggaaaagaaaaaaggtctgcctgtctttcgctcccttctcgctgagtcagagtccagg
ttgttccctgacaacgacctgctgcggcggctgcgtctggtcacacaagatgcagagaag
tgtgcctcagtggctcagcagctactgaatggcaaaaagcagaccaggtatcgatgtgga
agtggaaggtcccgcagccagttaacagtggaagagctcagctcgtttgtgaggcagctg
tacaacctctgctgcagcctccctcaggcgcctcagctgaaggaactgttgaatcggatt
gaagacttccagcagcacagcgagaaggtcttagcagaggaatcccccagtgttgcagag
atccagagccttctagacgtcagctttgatttcgatgtagacctgccagaactgccgcta
ctgagggagaggctggagcaggcaaggtggctggaggcggtgcagggggccagctcccag
cctgccacactcaccttagaggccatgaggagactcatcgaccagggagtcgggttggca
cctcacccgtccgtggagaaagctatggcacgcctccaagagcagctcactttgtcggag
cactgggaggataaggcgagcagcctgctgcaggccagacccccccactcaatagaaaca
cttagcgccgctgctgaacaggcctcagtaatccccgctcatctcccaaactgtctgctc
ctgaaagacaccatcaggaaagcccaggagtggcttcaagaagcagaggagctccaggtg
agtggatgtgtgatgacggcagacagcctgtctgacatggtgctacgaggacaggccatc
caggtgcagctggagcccttagagaggctggagtatttgttggcaaacgcgcaggagtgg
aaagaatctgcagcagcaacgttccttttaaaggactcatctcttactctgctagaggtc
ctgtgtccaagctttgaagtcggaactctcagtacctcaaagaggaaggccaagaagggg
aaagaatacccgaaaaataacaaaaagaaacctgcacggcttaactctctccgtgaggtg
gaaaaagctctttcagagagcacggactctacatctgctatggcgactctggaggagctg
cgtgtcagggagatggagaccttctttaatctcagggcagcgaatgagtcaaagctcctt
cccacggcggactgcatggacctgaaggtgtgtttctgccagaaggcgcccatgggagca
atgctgcagtgtgagctctgcagggacgccttccacagcgtctgcgtcagggacccatcc
gacagctttgaaacgcagccgtggctctgtccacactgccagcggtcagagaagcccccg
ctaagcaaagtcttctctctgctgacgtctctgcgaagcgtaggcgtccgtctgccagag
ggcgacgctctgaactatctggtagataggacacttaactggcagcagcgaacgcagcag
attttaacagattgtcacctgccggagttagaagagagaccagaaacccctccaacacta
acccactgggtgtcaggctgcgacaacactcataccaacactcaggctccgtgtttgact
ccagagtggaacaggacaagccatgctcagactgtcttttacactgagcagagatgcatc
ccactgcagggcttgaacagcgagctggaggagctgatggtggaggggctcctgcttcag
gtgtctttgccgcaggtccacagcctctaccatattttactggacagagccaacagccag
caccccaaccgaccggcgtcacctccaaaggaggagccctcagaccaaggaaaacacatg
cagttcatctctcagggaacaaatatggcactgaaccaggatggaagcaccagcaccagg
gacaccatgaccccctcagaaaggaaagcaaagaggcgtctggagaggggaggattaccg
gacgcagagcccaggggaagagataaaaaacactctcacaaaagacaaaaggtgaataaa
aagaagccccagcgccgaccagcttctacctcatcctccccgcgctctgacttctcccag
tctgatgactctgatgaggaaatggctgtgtgtcctgctgaaagctgtctgctgccagaa
ggagatgaggtggactgggtccagtgtgacggcagatgcaaccagtggtttcaccaagtc
tgtgtcggcgtcacgccagagatggccgagaaggaggactacgtttgtgtgtcatgcacg
ctgaacgatcgacagatcagaaagtga

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