Cyprinodon tularosa (White Sands pupfish): 119799478
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Entry
119799478 CDS
T07496
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013
Nucleocytoplasmic transport
ctul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119799478 (zgc:193690)
03015 mRNA surveillance pathway
119799478 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119799478 (zgc:193690)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119799478 (zgc:193690)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119799478 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119799478
NCBI-ProteinID:
XP_038165319
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MAEDSWALAVDVQETTTPSRLFPKHITSTLHQLKEDVNANLEPKWSQDEENDAGGDRVNK
AEQSLLNKLIRCSLVKNGNQVEVQQADPKSPLFSAKTFEELRLKPELLKGVFTMGFNRPS
RIQENALPMMLAEPRQNLIAQSQSGTGKTAAFSLAMLSHVNPENNWTHCLCVAPTYELAL
QIGQVIEQMGKFCSNVKLAYAIRGSRVERGIKRQEQIVIGTPGTVLDWCTKYKLIDPKKI
TMFVLDEADVMIARQGHREQSIRIQRLLNKSCQMLLFSATFEDSVMTFAERVISQPNIIR
LKRVEETLETIKQFYVLCRRKEDKFIALCDLYGCLTIAQAMIFCHTRKMAAWLASQLIEE
GHRVALLSGEMTVEQRAAVIERFRNGNEKVLVTTNVCSRGIDVEQVSLVVNFDLPVDMQG
NADNETYLHRIGRTGRFGRRGFAVNMVDSDHSMDIIRQIEKHFDKKITKLDTSNLEEMEE
MTI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggattcttgggcgttagcagtcgatgttcaggagaccacaactccgtcccgt
ttgtttcccaaacatatcacatcaacacttcatcaactgaaggaggacgttaatgctaac
ctagagccaaaatggagccaggatgaagaaaatgacgcggggggtgatcgagttaacaaa
gcggagcagtctctgcttaataaactgatccgctgctctctggtgaagaacgggaaccag
gtcgaagtccagcaggcagaccccaagtcccctctgttctctgccaaaacctttgaggaa
ctcagactgaaacctgaactgttgaaaggtgtcttcacaatgggattcaacagaccatcc
aggatccaggaaaatgctttgcctatgatgctcgcagaaccacgtcagaatctgatcgct
cagtcgcagtctggcaccggtaaaactgcagcgttctctctggccatgctgagtcacgtc
aaccctgaaaataactggactcattgtctgtgtgttgcaccaacttatgagctggcgttg
cagattggccaagtgatcgaacaaatgggcaaattctgttcaaatgtgaaactggcctac
gccatacgagggagccgagtggagcgaggcattaagcggcaggagcagatcgtcattgga
accccaggaacggtcctagactggtgcaccaagtacaagcttatcgaccccaagaagatc
accatgtttgttctggatgaagctgacgtgatgatcgccaggcagggccatcgggaacag
agcatccgtatccaaaggctgctcaacaaaagctgtcagatgctgctcttctccgcaacc
tttgaggattctgtgatgacgtttgctgagcgagtgatttcacagccgaatatcatccga
ctcaaacgggtggaagagacgctggaaaccatcaaacagttttacgttctttgtaggagg
aaggaggacaagttcattgcgctctgcgacctgtacgggtgcctgactattgcacaggca
atgatcttctgccatactcggaagatggctgcttggctggcttcacagctgattgaagaa
ggccaccgggtggctctgctgagcggagaaatgactgtggagcagagggctgctgtcatt
gaacgcttcagaaatggcaacgagaaagtgctggtgaccactaacgtttgttccagaggt
attgatgtggagcaggtgtctctcgtggtcaattttgacctcccagtggatatgcaaggg
aatgctgacaacgagacgtacctgcataggatcggccgaacaggacgctttgggcgaaga
ggattcgctgtcaacatggtggacagtgaccacagcatggacataatcagacaaattgaa
aagcatttcgacaagaaaatcacaaaacttgataccagcaaccttgaggaaatggaggag
atgacgatctga
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integrated database retrieval system
