Cyprinodon tularosa (White Sands pupfish): 119799531
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Entry
119799531 CDS
T07496
Symbol
si:dkey-225n22.4
Name
(RefSeq) collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
E1_DerP2_DerF2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119799531
NCBI-ProteinID:
XP_038165399
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MLLWSVWSFLLLLTTVDAVEDEDVRAGCSTAVNDLVYIVDGSWSVGMEDFDTAKQWLINI
SSQFDISLYYTQVGVVQYSDTPRLEIPLGSHSSGAQLIQAIRSINYMGGNTQTGRAIKFA
VDHVFPASQRASQVKNRIAVVVTDGKSQDDVVDASMEARAQGITVFAVGVGSEITTSELI
SIANKPSSTYVLYAEDYTTIDRLRDSMEQKLCEESVCPTRIPVASRDEKGFELLLGMNIQ
KKAKKIAGSLVSETAYALTTSTDITENTRDIFPEGLPPSYVFVATIRLKGTSSKLIFDLW
RILAKSKEIQAAVTLNGKDQSVIFVTTSVSGKEQRVVFKTGFKDLYDGKWHQLKLLVRPQ
RVVGYLDDQMVQDFLLKPVESIYINGKTQVSKRRGAHVTVPVEIQKMRLYCDPYQSERET
ACEIYSVDDERCPLNRTATAEQDEEEDCNCALGPPGQRGPPGRMGFRGEKGREGPPGPDG
KPGKEGKPGDPGPPGFPGIKGDEGPQGLRGEPGVKGDKGDQGEPGLQGKPGPTGPQGLPG
ERGEPGPAGETGLKGERGDVGPVGAVGPKGAPGSKGPPGEVGLQGSPGEQGLPGPQGPPG
LKGNMGIQGPQGPPGEIGQDGPKGKCGDPGVAGPPGLPGLKGLVGEPGFAGQPGARGLPG
FKGHKGERGETGSKGNQGERGEDGEPGTPGVPGEVGPRGLKGERGVRGESGPRGPEGKKG
DTGHLGIVGPRGFPGQDGLPGQPGQPGYPGKPGKTPSDEHLLKLCTDVFRNQLPAMLQSL
SLQASCESCQTVKGPPGEPGAPGPKGSMGAPGYPGRSGAPGYPGPPGMQGPAGIKGDSGE
RGLKGSKGDGYRGPPGPPGQPGIQGPRGFDGIGYPGNQGTPGKPGIPGDPGKQGNPGLPG
VCDISMCYRNYGHRQHYNKGPHV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtggtcagtatggagttttttgttacttctgaccacagtggacgctgtggag
gatgaagatgtccgagcagggtgcagcacagcagtaaatgacctggtgtatattgtcgat
ggttcttggagtgttggcatggaggactttgacacagccaagcaatggctaatcaacatc
agcagccagtttgatatcagcctttactatacgcaggtgggtgtggttcagtacagcgac
acacctcggttggagatccccctagggagtcactccagcggagcccagctcatccaggcc
attcgcagcattaactacatgggaggaaacacacagactggcagggccatcaagtttgct
gtggaccacgtattcccagcctcccagcgggccagccaagtcaagaacagaatcgcagtg
gttgtcaccgacggcaaatcacaggatgatgtggtggatgcaagtatggaggcacgagct
cagggtattaccgtatttgctgtcggagttgggagtgagatcaccacctcagaactgata
tctatcgccaataagccgtcgtctacgtatgtcctctatgctgaggattacaccactatc
gaccgcctcagagactccatggagcagaaactgtgtgaagaatctgtttgccccacaaga
atcccagtcgcatctcgtgatgagaagggctttgagctgctgctgggcatgaacattcag
aagaaagccaagaagatcgccggctctcttgtttctgagacagcctacgctctaactacc
tccacagacattactgagaacaccagagatatattcccagaaggtcttcctccatcgtat
gtgtttgttgccactatacgtctgaaggggacctcaagcaaattaatatttgacctatgg
aggattttggcaaagagtaaggaaatccaggctgcagtaacactaaatggaaaagaccag
tctgtcatcttcgttaccaccagcgtgagcggaaaagagcaaagagtcgtcttcaaaaca
ggctttaaggatctgtatgacgggaaatggcatcagctgaagcttctggtgaggccacag
cgggtcgtcggttacctcgacgatcaaatggtccaagacttcctgctgaagcctgtggag
tccatttacataaacgggaagacacaggtgtcaaagaggcggggggcacatgtcaccgtg
ccggtggagatccagaaaatgcgtttgtactgtgacccgtatcaaagtgagagagaaaca
gcatgtgaaatatactcagtggatgatgaaaggtgtccgctgaatcgaacagccacagca
gaacaagacgaggaagaagattgcaactgtgcacttggcccaccggggcagcgtggccca
ccagggcgcatgggtttcagaggagagaaagggagagaaggaccaccaggacctgacggt
aagcctggtaaagaaggtaaacctggtgatcctggccctcctggattcccagggataaag
ggtgatgaaggcccccaaggactaagaggggagcccggtgttaaaggagacaagggagat
caaggggaaccaggactgcaaggaaaacctggaccaaccggaccacagggacttccagga
gagaggggtgaaccaggacctgcaggagaaactggccttaagggtgagagaggtgacgtt
ggaccagttggtgccgttggaccgaaaggtgccccgggttctaagggacctcctggtgaa
gtgggcctgcagggatctccgggcgaacaaggcttacctgggcctcaggggccacctggt
ctcaaaggaaacatgggaatccaaggaccccagggtccacctggagagatcggtcaagat
ggacccaaggggaagtgtggtgatccaggagttgccggcccccctggtcttccaggacta
aaagggttggtgggggagccgggctttgcaggccagccgggtgctagagggctaccaggc
tttaaaggtcataagggagagagaggagagactggctctaaaggaaaccagggggagcga
ggagaagatggagaaccagggactcccggcgtgcctggcgaagtcggacccaggggactg
aaaggagagagaggagtgagaggtgaaagtgggccaagggggcctgaaggaaagaagggt
gatacgggccatttgggcattgtcggtccccggggctttcctggccaagatggactgcca
ggtcagccgggccaacctggataccctggaaaaccgggcaagactccttcagatgaacat
cttcttaagctgtgtaccgatgttttccgcaaccaactcccagcaatgctccaaagcctt
tccctccaagcaagctgtgaatcctgccaaaccgtgaagggaccaccaggtgagccagga
gcaccaggtccaaaagggtctatgggagctccaggataccccggaagaagtggtgctcca
ggctaccctggaccccctggaatgcagggtcccgcaggcatcaaaggagacagcggagaa
agaggtctaaaaggcagcaaaggagatggttatagaggtcctccaggacctcctgggcag
ccaggaatccagggtcctcgtggctttgatggaattggctatccaggcaaccagggtact
cctgggaagcctggaataccaggagaccccggcaaacagggcaacccaggacttccagga
gtttgcgatatatcgatgtgttatcggaactacggccacaggcaacactacaacaaagga
ccccacgtctga
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