Cyprinodon tularosa (White Sands pupfish): 119799534
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Entry
119799534 CDS
T07496
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul00260
Glycine, serine and threonine metabolism
ctul00630
Glyoxylate and dicarboxylate metabolism
ctul00670
One carbon pool by folate
ctul01100
Metabolic pathways
ctul01200
Carbon metabolism
ctul01230
Biosynthesis of amino acids
ctul01240
Biosynthesis of cofactors
ctul04981
Folate transport and metabolism
Module
ctul_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
119799534 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119799534 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119799534 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
119799534 (shmt1)
Enzymes [BR:
ctul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
119799534 (shmt1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
119799534
NCBI-ProteinID:
XP_038165406
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All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSLTNGHSVGKETWDSHNKMMLEPLAVSDSEVFSIIKKEKHRQVYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHIDELERLCQKRALELFGLDPEKWGVNAQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVSPETGYI
DYDKLQENARLFHPRLIIAGTSCYSRNLDYARLKQIANENGAYLMGDMAHISGLVAAGVV
PSPFEHCDIVTTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETVYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTAEFKAYQQQVLANCKALSSTLMDLGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGMIEEDLKKVA
HFIHRGIELTLEVQRSLDPKATLKEFIQALAQGEKFQQRAAEIRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacaaacggccacagtgtgggtaaagaaacctgggattcgcacaacaagatg
atgctggagcctctggccgtcagtgactcagaggtgttctccatcataaagaaggagaag
cacaggcaggtctacggtctggagctgatagcgtcggagaattttgccagcagagctgtt
ctggaggctctgggttcctgtatgaacaacaagtactctgagggttatcctggccagagg
tactatggtggtactgaacatattgatgagctggagagactctgccagaagagggcgctg
gagctctttggtttggatccggagaaatggggcgtcaatgcacagccatactcaggttcc
ccagccaactttgcagtctacacagctgtggtggagccacatggccgcatcatggggctg
gaccttcctgatggcggccacctcacccacggcttcatgaccgagaagaagaaaatctca
gcaacctccatcttctttgaatccatgccatataaggtgagtccagaaacgggctacatc
gattatgacaagctgcaggaaaatgcacggctgttccacccgaggctcatcattgcagga
acaagctgctattcgaggaaccttgactacgcccgcttgaagcagatcgccaatgagaat
ggtgcatatctgatgggggacatggctcacatcagtgggttggtggctgctggagtggtg
ccctcaccctttgagcattgcgacattgtcaccacgacgacccacaaaactctgcgtggc
tgccgagccggacttatcttttatcggaaaggggtgcggagtgtggacgccaaaggaaag
gagactgtgtacaacttggagtctttgatcaaccaggccgtgtttccaggtctgcaggga
ggacctcacaatcacgctatcgcaggtgttgctgtggcgctcaaacaagccatgacggcg
gagtttaaagcttaccagcagcaggtcctggctaactgcaaagctctatccagcacccta
atggacctcggttacaagattgtcaccggtggttctgacaaccatttaatcctgctggac
ctgcgcagcaaaggaacggacggaggaagagccgagaaggtcttggaggcgtgtgccatt
gcttgcaataagaacacctgcccaggcgataagagcgctttacgtcccagtggtctgagg
ttcggctctccagctctgacatccagagggatgatagaggaggacttgaagaaggtggct
cacttcattcatagaggtattgagctaactttggaggttcagagaagtttggatccaaag
gccaccctgaaggagttcatccaggcgttggctcagggggagaagttccagcagcgggcg
gctgagatcagggctgaggtggaggcgttcgccgggcagttccccatgccgggccttcct
gagctgtag
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