KEGG   Chryseobacterium sp. C-71: LNP04_01310
Entry
LNP04_01310       CDS       T08775                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ctur  Chryseobacterium sp. C-71
Pathway
ctur03030  DNA replication
ctur03430  Mismatch repair
ctur03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LNP04_01310 (dnaX)
   03430 Mismatch repair
    LNP04_01310 (dnaX)
   03440 Homologous recombination
    LNP04_01310 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ctur03032]
    LNP04_01310 (dnaX)
   03400 DNA repair and recombination proteins [BR:ctur03400]
    LNP04_01310 (dnaX)
Enzymes [BR:ctur01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LNP04_01310 (dnaX)
DNA replication proteins [BR:ctur03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LNP04_01310 (dnaX)
DNA repair and recombination proteins [BR:ctur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LNP04_01310 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid DNA_pol3_gamma3 AAA_22 RuvB_N AAA_30 AAA_14 Rad17 AAA_5 TIP49 RCF1-5-like_lid nSTAND3 AAA_7 AAA_16 AAA_24 AAA_18 DNA_pol3_delta_C ABC_tran RNA_helicase AAA_19 AAA_assoc_2 NTPase_1 AAA_2 SRP54 Sigma54_activ_2 AAA_33 RsgA_GTPase DUF815 DUF7486 NPHP3_N DEXQc_Suv3 TsaE AAA_11 AAA_28 Mg_chelatase
Other DBs
NCBI-ProteinID: UFH32374
LinkDB
Position
323649..324734
AA seq 361 aa
MENFIVSARKYRPQQFDTVVGQSHITDTLEHAIEENQLAQALLFCGPRGVGKTTCARILA
RKINEKDGSVSEDGFAYNIYELDAASNNSVDDIRELIDQVRFAPQVGQYKVYIIDEVHML
SSAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIYDFKRITILDIQSHLKGIA
EKENIRYEDDALYLIAQKADGALRDALSIFDRLSTFSQKNITLAKAAEVLNILDYDQYLK
IVDFAKENKIPEVLFAFNEIVKRGFDPHIFIAGLGNHFRDLMMAQNASTIDLIEVGEQTK
TKFVEQAQKWNAQQLIDGIEICNHADINYKNSKNPRLTVEIALMQLASLTAGGDVAKKKS
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaaaactttatagtatctgcaagaaaataccgcccccaacagtttgacaccgttgtt
gggcaatcacatattacagatactttagagcatgctatagaagaaaatcagttagcacag
gctctgcttttctgtggcccacgtggagtaggtaagacaacttgcgcaagaattttagca
agaaaaataaacgagaaagacggttctgtttcagaagacggttttgcttataatatatat
gagctagatgctgcatctaataactctgttgatgatattcgtgaattaattgatcaggtg
cgttttgcaccgcaggttggtcagtacaaagtgtatattattgacgaggtacacatgctg
tcatctgcagcattcaatgcctttctgaaaactttggaagaaccgccggctcatgcaatt
ttcattcttgcaacgactgaaaagcacaagattattcctaccattttgtctcgttgtcag
atttatgatttcaaaagaattacaattcttgatattcagagccatttaaaaggtattgct
gaaaaagaaaatattagatatgaagatgatgctttgtatttaattgctcagaaagcagat
ggagcattacgagacgcgctttctatttttgacagactttctacgttttcacagaagaat
attacgttggccaaagctgccgaagttcttaatattttagattacgatcaatatctaaag
attgtagattttgcgaaagaaaataaaattcctgaagttctttttgcttttaatgaaatt
gtaaaaagagggtttgatccgcatatttttattgcaggtttaggaaatcatttcagagat
ttaatgatggctcagaatgcttcaacaattgatttgattgaagtgggagagcagaccaaa
acaaaatttgttgagcaggctcaaaaatggaatgcccagcaattaatcgatggaattgag
atttgcaatcacgcagatatcaattataaaaattcgaagaacccgaggcttactgtagaa
attgctttgatgcaattggcttctctcactgcaggtggagatgttgctaaaaaaaaaagt
ttataa

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