Chryseobacterium sp. C-71: LNP04_02530
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Entry
LNP04_02530 CDS
T08775
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
ctur
Chryseobacterium sp. C-71
Pathway
ctur00550
Peptidoglycan biosynthesis
ctur01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LNP04_02530 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctur01002
]
LNP04_02530 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ctur01011
]
LNP04_02530 (dacB)
Enzymes [BR:
ctur01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LNP04_02530 (dacB)
Peptidases and inhibitors [BR:
ctur01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LNP04_02530 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ctur01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LNP04_02530 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
CusS
Motif
Other DBs
NCBI-ProteinID:
UFH32608
LinkDB
All DBs
Position
complement(573763..575136)
Genome browser
AA seq
457 aa
AA seq
DB search
MKKSLALIIFSTQIIFAQNFAQKLDDATKNLMNSSLAVSSNLSFYVSDESGNLIYEYQGS
KGLSTASTQKIFTAAAALETLGKNYTYKTTSAYSGTISNGNLNGNLFITSNGDPTLGSWR
YDGYKPENFKQKLLEAIKKSGITKISGDLIIDDSYFDHQTIPGGWPWDDLGNYYGAGVWG
VNWRENQFDININGTDFKSFSYPLAGIKWLNDLKAAGSSDQSLIFTAPHSEVALINGSLP
AGKVTTVSGSVPNPPLQLGVEVQKWLKDSGVEFSGKVLTNSQIEIEGKKAIEFPKNNIIL
TYESPTLDKIVYWFLRKSVNLYGENLIKTLGKEKKGNSSFKNGIAYLTEFWKSKGINSNM
INFADGSGLSPQNYVSAKAEVQALIYAKKQPWFESYYDGFPTQDNGMKMKSGTMRDTKSY
AGYHASKDGKKYVYAIIINNYQGSGSTELQKILNLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcgcttgccttaatcatattctccacacaaattatttttgctcaaaatttt
gctcaaaaattagatgatgctacaaaaaatctgatgaattcttcattggctgtttcatca
aatctatctttttatgtttcagatgaaagcggaaatttgatttacgaatatcaggggagt
aaaggtttatcaacggcttcaacccaaaaaatatttactgcagcagccgctttggaaact
ttaggtaaaaattatacttacaaaacgacttcggcatactcaggaacgatttctaatgga
aatttaaacggaaatcttttcatcacatcaaatggtgatcctacgctaggaagctggaga
tatgatggctataagcctgaaaatttcaaacaaaaattgttagaagccatcaaaaaatca
ggaattacaaaaatttccggtgatttaattattgatgattcttattttgaccatcagacg
attcccggaggttggccttgggatgatttggggaattattatggtgctggggtttgggga
gtcaattggcgtgaaaatcagtttgacatcaatatcaacggaacagattttaaaagtttc
tcttatcctttagccggaattaaatggctgaatgatttgaaagcagccggaagttcagat
caaagcttgatttttacggctccacattctgaggtggctttaattaatggaagtctgccc
gcaggaaaagtgaccacagtttcgggttctgttcccaatccgcctttgcaattgggcgta
gaagttcaaaaatggctgaaagattccggagttgaattttcgggaaaagttttaacaaat
tctcaaattgaaattgaaggaaagaaagctatagaatttccaaaaaataatattattctg
acctacgaatcgccgactttagataaaatcgtttattggttcctgagaaaatctgtgaat
ttatatggggaaaatttaattaaaactttaggtaaagagaaaaaaggtaactcaagtttc
aaaaacggaattgcttatcttacagagttctggaaatcaaaaggtattaattcaaatatg
attaatttcgctgacggaagcggactttccccacaaaattatgtttcagcaaaagccgaa
gttcaggctttaatttatgctaaaaaacaaccctggtttgaatcttattacgacggattt
cctactcaggacaacggtatgaaaatgaaaagcggaacgatgagagatacaaaatcatac
gcaggatatcacgcttcaaaagatggaaaaaaatacgtttacgcaattatcatcaataat
tatcagggaagcggaagtacagaattgcagaaaattttaaatcttttaaaataa
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