Chryseobacterium sp. C-71: LNP04_03165
Help
Entry
LNP04_03165 CDS
T08775
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ctur
Chryseobacterium sp. C-71
Pathway
ctur02024
Quorum sensing
ctur03060
Protein export
ctur03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LNP04_03165 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LNP04_03165 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LNP04_03165 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ctur02044
]
LNP04_03165 (ffh)
Enzymes [BR:
ctur01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LNP04_03165 (ffh)
Secretion system [BR:
ctur02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LNP04_03165 (ffh)
Eukaryotic Sec-SRP protein
LNP04_03165 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
SRPRB
cobW
CbiA
CLP1_P
nSTAND3
APS_kinase
KAP_NTPase
ResIII
AAA_18
AAA_16
AAA_30
ATP_bind_1
MMR_HSR1
AAA_31
AAA_24
AAA_33
ATPase
SLFN-g3_helicase
6PF2K
NACHT
NPHP3_N
AAA_14
AAA_19
DO-GTPase1
RRM_Nup35
TsaE
KTI12
Motif
Other DBs
NCBI-ProteinID:
UFH32732
LinkDB
All DBs
Position
707213..708574
Genome browser
AA seq
453 aa
AA seq
DB search
MFNSLQDKLDKALHNLSGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAL
GENVLTSLTPGQLMTKIVHDELVGLMGGSQEGINLSGKPSVILIAGLQGSGKTTFSGKLA
NYLKTKRSKKPLLVACDVYRPAAIDQLKVLGGQIGVPVYTEEGATNPSTIAENAISFAKS
NGHDVVIVDTAGRLAIDEQMMNEIKSVHYFIKPNETLFVVDSMTGQDAVNTAKAFNDALN
FDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAIK
DVEISDDAFKHIEAIIHSMTPDERRRPSIINTQRKNRIAKGAGRKIEDVNALMKQFDQMG
KMMKMMQGPQGKQMMQMMSKMPNMPGMGGMFGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatagtttacaggataaattagacaaagcacttcacaatctttccggacgtgga
aaaattaccgaaatcaacgttgcggaaaccgtaaaagagattcgtagagcattggtagat
gccgatgttaactataaagttgcgaaagatttaaccaaaagagttcaggataaagcttta
ggagaaaacgttcttacttcgcttactcccggacaattgatgacaaaaattgttcatgat
gaattggtaggtttgatgggtggatctcaggaaggaattaatctttcaggaaaaccttct
gtaatccttatcgcaggtcttcagggttctggtaaaactactttttctgggaagcttgct
aattatttaaaaacaaaaagatctaaaaaacctttgttggttgcctgtgatgtttaccgt
ccggctgcaattgatcagttgaaagttcttggcggacaaatcggagttccggtttataca
gaagaaggtgctacaaatccttctactattgctgaaaatgcaatcagttttgctaaatct
aacggtcacgatgtagtaatcgtcgatacagcaggtcgtttggcgattgacgagcagatg
atgaacgaaattaaatctgttcattatttcattaaaccaaacgaaactctattcgtggtt
gactcaatgactggtcaggatgctgtgaacacagcgaaagcatttaatgatgctttaaat
tttgacggagttgttttaaccaaattagatggtgacactcgtggtggagctgctcttacg
attcgttcagtagttgaaaaaccaatcaaatttatctctaccggagaaaaaatggaagct
ttagatcttttctacccagaaaggatggcagacagaatcttgggaatgggagacgttgtt
tccttggtagaaagagctcaggaacaatttgacgaagaggaagcaaaaaaacttcacaag
aaaatcgctaaaaacgaatttggttttgatgatttcttaaagcaaatcaaccagatcaag
aaaatgggtaacatgaaagacttgatgggaatgattccgggagttggaaaagccattaaa
gacgttgagattagcgatgatgcattcaaacatatcgaagcgattattcattctatgact
cctgacgaaagaagaagaccttctatcatcaatacgcagagaaaaaacagaattgctaaa
ggtgcaggaagaaaaatcgaagatgtaaacgcattgatgaaacagtttgaccaaatgggg
aaaatgatgaaaatgatgcagggaccgcaaggaaaacaaatgatgcagatgatgagcaaa
atgccaaatatgccaggaatgggcggaatgttcgggaaataa
DBGET
integrated database retrieval system
