Chryseobacterium sp. C-71: LNP04_06290
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Entry
LNP04_06290 CDS
T08775
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ctur
Chryseobacterium sp. C-71
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctur03009
]
LNP04_06290 (rimO)
Enzymes [BR:
ctur01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LNP04_06290 (rimO)
Ribosome biogenesis [BR:
ctur03009
]
Prokaryotic type
ribosomal protein modification factors
LNP04_06290 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DnaT_2
Motif
Other DBs
NCBI-ProteinID:
UFH33324
LinkDB
All DBs
Position
complement(1397363..1398664)
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AA seq
433 aa
AA seq
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MRTKSVGKKKINIVTLGCSKNVYDSEVLMSQLKANGKEVVHEDKGDIVVINTCGFIDNAK
EESINTILEYVEAKNRGEVEKVFVTGCLSERYKPDLIKEIPDVDQYFGTRDLPILLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVKESQKLA
KVGVKELILIAQDLTYYGLDIYKKRALGELLKELVKVEGIEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTNALLDKFREKVPDMAIRTTLIVGYP
GETEERFQELKEWVRTQKFDRLGCFTYSHEENTGAYVLEDDIPQQVKEARVEEIMELQSQ
ISWEKNQTKIGEVYKCVFDRKEGNYFVGRTEYDSPDVDNTVLVPAENTYISIGDFANVKI
TSAEEFDLYGELV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatctgtaggaaagaaaaaaataaatattgtaacccttggttgttccaag
aacgtttacgattcggaagttttgatgagccagcttaaagctaatggaaaagaggtggtg
catgaagataaaggcgatattgtggtaatcaatacctgcggatttattgataacgcaaaa
gaagaatctatcaacaccattcttgagtatgttgaggcgaaaaatagaggtgaggttgag
aaagtttttgttacaggttgtctttctgagagatacaagccagatttaataaaagaaatt
cctgatgttgatcagtatttcggaacaagagatttgccgattttattgaagcatttaggg
gcagattacaaacatgagttggtaggagagcgattgacgaccacaccaaaacactacgca
taccttaaaatttccgaaggctgcgacagaccttgttcgttctgtgcaattcctttgatg
agaggcggacacgtttctacaccaatcgaaaaattggtgaaagaatctcagaaattagct
aaagttggagtgaaagaattgatcttaattgctcaggatttgacctattacggtttagat
atatataagaagagagctttgggcgaacttctgaaagaattggtaaaagtagaaggaatc
gaatggattcgtctacattatgctttcccgagcggtttcccggaggatgttttagatatt
ataagagaagagccaaaagtttgtaattatatagatatcccgcttcagcacatcaattca
gatttattgaaatcgatgaaacgtggaacgacacacgaaaaaacaaacgctttattagat
aaattcagagagaaagttccggatatggcaatcagaacgactttaatcgtaggttatccg
ggtgaaactgaagaaagatttcaggaattgaaggaatgggtgagaacgcagaaattcgat
cgattgggatgctttacttattctcatgaagaaaatacaggagcttacgttttagaagac
gatattcctcagcaagtgaaagaagcaagagtagaagagattatggaattgcagtcacag
atttcttgggagaaaaatcagactaagattggtgaagtttacaaatgcgttttcgacaga
aaagaaggaaattactttgtgggaagaacggaatacgattcgccagacgtagacaatacg
gttttggttcctgcagaaaatacatatatctcaattggtgattttgccaatgtaaagatt
acttccgcagaagaatttgatttatatggtgaacttgtgtaa
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