Chryseobacterium sp. C-71: LNP04_06950
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Entry
LNP04_06950 CDS
T08775
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ctur
Chryseobacterium sp. C-71
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctur02000
]
LNP04_06950
Transporters [BR:
ctur02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LNP04_06950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
UFH33439
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All DBs
Position
1530417..1532240
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AA seq
607 aa
AA seq
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MKKSKSIFILSFLAGALFLNSCSDFLEPENLSSISEAQQFDSTADTFSALVGVYAQLGGD
DGYGQRLSLIIPQSGDDFRTSGSYNCNDRRGVATFGACTTNTELNGPFSKLYTGIERANL
VIKNIPLSPVMQTGSAEDKKLMNRYLGEALTLRAQYYYELIRNWGDVPFYLVPASDLAEQ
NQPKTDRDIIYDQMIIDLEKAATLVPWRSEGSTTSNRISKGFVKGLRARIALARAGYSLR
RSPQIMAQGSNPQKYYQIALDECKDIMNHSGEHSLNPSYENVFRALHTNAQDATNEVIFA
VGAFGGGTRTDSKIGYYNGLKHHDNSVWKGGGGINALPTYFYEFTKYDLRRDMNVGIFTI
NATNQADLAASNAWTDSKYRKSWTSITGPSQTLAVDWPLLRLSDVMLMFAEADNEIHGAP
SQEAKNALLAVRNRAYTGNLGQVGTIPSDKVGFFNAIVKERLLELGSEGIRKYDLIRWNL
LASKIIETKQKLTDFINGTGAYANVPLNIYYKSSVYDPTKTAQQNIAAIDVYTTGTDKSQ
VFYLPNQSATTPSGYKSIAWRSGISATYVNDPSAGYAQYFEANKRELLPIYFEYIQNNYN
LTQDYGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagcaaatcaatatttattttatcttttctggcaggtgcacttttccttaat
tcgtgcagcgattttcttgagccggaaaacctttcaagtatttctgaagcacagcagttt
gacagtactgcagatacattttcagctttagtgggagtgtatgctcaattgggaggagat
gacggatatggacaaagattatctttgattataccacaatccggagacgacttcagaact
tcaggaagctataattgtaatgacagaagaggtgtagcaactttcggtgcttgtacaacc
aatacagaacttaatggacctttttcaaaactatatacaggaattgagcgtgcaaatctt
gtcattaaaaatattcctctatctcctgtaatgcaaaccggatctgctgaagataaaaaa
ctaatgaacagatacttaggagaagccttaacgttaagagctcaatattactacgagctt
atcagaaactggggagatgtacctttctatttagtaccggcttctgatttggcagagcaa
aaccagccaaaaacagacagagatattatctatgatcaaatgattatcgatctggagaaa
gctgcaaccttagttccttggagatctgaaggtagtactaccagcaacagaatttctaaa
ggttttgtgaaaggtcttagagcaagaattgcattggcaagagcaggatattctttaaga
agaagtcctcaaatcatggctcagggatcaaatcctcagaaatattaccaaatagcttta
gacgaatgtaaagatattatgaatcattcgggcgagcacagtctgaacccaagctacgaa
aacgtattcagagctttacataccaatgctcaggatgcaaccaatgaagttattttcgca
gtaggagcttttggtggtggtaccagaacagactctaaaatcggatattacaacggtctt
aaacatcatgacaactctgtatggaaaggaggcggcggtatcaatgcgttgccaacgtat
ttctatgagtttacaaaatatgacttaagaagagatatgaatgtaggaattttcaccatt
aatgcaacgaatcaggctgatttagctgcttcaaacgcatggacagattctaaatacaga
aaatcttggacgagcatcacaggaccatctcaaacacttgcggttgactggcctctactt
cgtctttcagatgtaatgttgatgtttgcagaagcggataatgaaattcacggagcacca
tcacaagaagcaaaaaatgctttattagcagtaagaaacagagcttatacaggaaatctt
ggacaagtaggaacaattccttctgataaagttggtttcttcaatgcaattgtaaaagaa
agattgctggaattaggttctgaaggaattagaaaatatgatttgattcgttggaattta
ttagcttcaaaaattatcgaaactaaacaaaaactgacagattttatcaacggaacagga
gcttatgccaatgtccctttaaatatctactataaatcttctgtttacgatccaactaaa
acagctcaacaaaacattgcagcaatcgacgtttacactacaggaacagacaaaagccag
gtattttatcttcctaatcagtctgcaacgactccttcaggttacaaatcaattgcctgg
agatcaggaatttctgctacgtatgtaaatgatccatctgcaggatacgcacaatatttt
gaagccaataagagagaattattgcctatttatttcgaatatattcaaaataactacaat
cttactcaagattacggttattag
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