Chryseobacterium turcicum: LNP04_07790
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Entry
LNP04_07790 CDS
T08775
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ctur
Chryseobacterium turcicum
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctur03400
]
LNP04_07790
DNA repair and recombination proteins [BR:
ctur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LNP04_07790
Archaeal homologous recombinant proteins
LNP04_07790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UFH33600
LinkDB
All DBs
Position
1713870..1716908
Genome browser
AA seq
1012 aa
AA seq
DB search
MIPIQLTIEGLYSYQERQKINFENLTEAGLFGIFGSVGSGKSSILEAISFALYSETERLN
ARDKRAYNMMNLKSNKSYIEFDFINYENKKFRATREFRRNSKNFEDVKTPTVNFYEWKNE
SWIPLDHSNAEKIIGLSYANFKRTIIIPQGQFKEFLELGAADRTNMMKEIFSLQRFDLQN
NVSALNAKNRSELDQLEGQLKGFEEVNEEQILVQKENLKTEQQKFEEVKIQFKNIEQKYQ
QLKNLKTDFESLKQKKTDFEKLSIQKTNIDELETKTELFDKVFRIFTPIITEKNKLQKEI
SEQLKNKEHQFKNLQETEGKFENIKNKLLAIQPKYEALHQSKIQENDLSLMLQMLTFSDE
IETLKERTKKGSEKVKEVEENQKLIQQKAQELSKQIDFLKPKKLDSNLLLNVGNWFSEKK
KLEESLKSQVEKINAKKLETERISEELKPFEINLETFKNDFKAQIETLENQKKTLSEKRN
HLEVQQKLAHFASELHDGESCPLCGALEHPNIVEFDDVNSELNEIQKKIEQIETQKDQIQ
KQSLEIEKILDRKKIFEEQLKSEEEIVKQIQINIEEHLKSFIWTEFNAENQNDFEEKRQQ
SFSIEKQIDELNQKIGFEQKNLDKERENLDNYNKALEKFRLDEAKKEEQIKTNEANLKVL
QWIDYREKTIADVEEIYIKLSQSNLETEQNYQQLIKEEKEISPKLAEQKTIVDQLEKRVT
ELEKESLENENILTKSLVDNNFNDENAVKNILLQEINVPDTRNIIQQFKIQFEIVKNDII
NLEIKLKDFSFDEEQFAETENQFKAFEIDLKNANDSVVKITTEIERLEKEFKKKESLLKD
LAQLQKRSENLKIMTNLFKGAGFVQYVSSIYLRQLCDHANVRFHRMTRNQLSLQLNESND
FEIVDYLNEGRSRSVKTLSGGQAFQVSLSLALALAESVQTNSQSEKNFFFIDEGFGTQDL
ESVNIVFETLMNLQKENRIVGIISHVEELKEKIPVSLHITKDEERGSLIEIV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgattccaattcaacttaccatagaaggtctttactcctatcaggaacgccagaaaatt
aattttgaaaatcttacagaagctggtttatttggaattttcggttcggtaggttccgga
aaatcttctattctggaagccatttcttttgcattatacagcgaaacagaacgtctcaac
gcaagagacaaacgtgcttacaatatgatgaatttgaaatcaaacaaatcgtatatcgag
tttgattttattaattatgagaataaaaaattccgtgcgacaagagaattccgacgtaat
tctaaaaatttcgaagatgtaaaaacgcccacggtaaacttttacgaatggaaaaatgaa
agctggattcctctggatcattctaatgcggaaaaaataattggattgagttatgcgaat
tttaagcgaaccatcatcattccgcaaggtcagtttaaagaatttttagagcttggcgca
gctgaccgcacgaatatgatgaaggaaatcttcagcctgcagcgttttgatttacagaat
aatgtttcagctttaaatgctaaaaacagatcagagctcgatcagttggaaggtcagctg
aaaggttttgaggaagtgaatgaagaacaaattttggttcaaaaagaaaatttaaaaact
gaacagcagaaatttgaagaggtaaaaattcagtttaaaaatattgaacaaaaataccag
cagcttaaaaatttaaaaacagattttgaatcgctgaaacagaaaaaaacagattttgaa
aaacttagcattcaaaagacaaacattgatgaattagaaaccaaaactgaactttttgat
aaagttttcagaatcttcacaccgattataactgaaaaaaataagcttcagaaagaaatt
tcggagcagttgaaaaataaagaacatcagtttaaaaatttacaggaaactgaaggaaaa
tttgaaaacattaaaaataaacttttggcaattcagccaaaatatgaagctttacatcaa
tcaaaaattcaggagaatgatttgagtctgatgctgcaaatgctgacattttcagacgaa
attgaaactctaaaagaacgaacaaaaaagggctcagaaaaagtaaaagaagttgaagaa
aatcaaaaattaattcagcaaaaagctcaggaactttctaaacaaattgatttcttaaag
cctaaaaaattagattctaatttacttttaaatgtaggaaattggttttcagaaaagaaa
aaattagaagaatctttaaaaagtcaggtagaaaaaatcaatgcaaaaaaacttgaaact
gaaagaatttcagaggaattaaaaccttttgaaatcaatcttgaaacctttaaaaatgat
tttaaagctcagattgaaactttagaaaaccagaagaaaacactttctgaaaagcgaaat
catcttgaagttcaacaaaaattagcacattttgccagtgaactccacgacggagaatct
tgtccgctttgtggtgctttggagcatccaaatattgtagaatttgacgatgtaaattca
gaattaaacgaaattcagaaaaaaattgaacagattgaaactcaaaaagatcaaattcaa
aaacaatctttagaaatcgaaaaaatacttgacagaaaaaagatttttgaggaacaattg
aaatctgaagaagagattgtaaagcaaattcaaatcaacattgaagaacatttaaaaagc
tttatctggacagaatttaatgctgaaaatcaaaatgattttgaagaaaaacgtcagcaa
tctttctcaatagaaaaacaaatcgatgaactcaatcaaaaaataggttttgaacaaaaa
aatctggataaggaaagagaaaatcttgataattataataaggctttagaaaaattcagg
cttgatgaggcaaaaaaagaagagcaaatcaaaacaaatgaagctaatttaaaagttttg
caatggattgattatagagaaaaaacaattgctgatgttgaagaaatttacattaaactt
tcgcaatctaatctcgaaacagaacagaattatcagcaattaattaaagaagaaaaagaa
atttcgccaaaattagccgagcaaaaaacaattgtcgatcaattagaaaagagagttaca
gaattagaaaaagagagtttagaaaatgaaaatattttaacgaaatccttagttgataat
aatttcaatgacgaaaatgctgttaaaaatattctactgcaggaaattaatgttccggac
acgagaaatatcattcagcaattcaaaattcagtttgaaattgtaaaaaatgacattatt
aatctggaaatcaagctcaaagatttttcatttgatgaagaacagtttgcagaaactgaa
aatcagtttaaagcttttgaaattgatttaaaaaatgcaaatgattctgtagtaaaaatt
acgacagaaatcgaaagactggaaaaagaattcaagaaaaaagaaagtcttttaaaagat
ttagcacaacttcaaaaacgctcagaaaatctgaaaataatgaccaatctctttaaagga
gcaggttttgtgcagtacgtttcttccatttatcttcgtcagttatgtgaccacgccaat
gttcgttttcatcgaatgacaagaaatcaactaagtttacagttgaacgaaagcaatgat
tttgaaatcgttgattatctgaatgaaggccgaagccgaagtgtaaaaacgctttccggc
ggacaagcttttcaggtttcattgagccttgcactggctttggccgaaagtgtgcagacg
aattcgcaatcggagaaaaatttctttttcatcgacgaaggttttggaacgcaagatttg
gaatcggtgaatatcgtctttgaaacactgatgaatcttcagaaagaaaaccgaattgtg
ggaattatttctcatgtcgaagagctgaaagagaaaattccggtttcactacatattacg
aaagatgaggaaaggggaagcttgattgagattgtgtaa
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