Chryseobacterium sp. C-71: LNP04_07995
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Entry
LNP04_07995 CDS
T08775
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ctur
Chryseobacterium sp. C-71
Pathway
ctur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LNP04_07995 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctur03019
]
LNP04_07995 (groL)
03110 Chaperones and folding catalysts [BR:
ctur03110
]
LNP04_07995 (groL)
03029 Mitochondrial biogenesis [BR:
ctur03029
]
LNP04_07995 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctur04147
]
LNP04_07995 (groL)
Enzymes [BR:
ctur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LNP04_07995 (groL)
Messenger RNA biogenesis [BR:
ctur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LNP04_07995 (groL)
Chaperones and folding catalysts [BR:
ctur03110
]
Heat shock proteins
HSP60 / Chaperonin
LNP04_07995 (groL)
Mitochondrial biogenesis [BR:
ctur03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LNP04_07995 (groL)
Exosome [BR:
ctur04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LNP04_07995 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LNP04_07995 (groL)
Exosomal proteins of breast cancer cells
LNP04_07995 (groL)
Exosomal proteins of colorectal cancer cells
LNP04_07995 (groL)
Exosomal proteins of bladder cancer cells
LNP04_07995 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
NNH2
Pho88
REF
Motif
Other DBs
NCBI-ProteinID:
UFH33632
LinkDB
All DBs
Position
1758692..1760317
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE
LEDRVENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVTAVVANLKEQSKQVGDSTEMVKQVASVSANNDETIGSLIAEAFGKVGKEGVITVEEA
KGIDTTVDVVEGMQFDRGYQSPYFVTNPEKMTVELENPYILLVEKKISSMKELLPVLEPI
AQSGKSLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEEQGFTMENVSLDMLGTAEKVSIDKDNTTIVNGGGEESKIKGRVNQIKAQMETTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALNATRAAVEEGIVAGGGVAFV
RAISALANLEGINADETTGIKIVKRAIEEPLRQIVANAGGEGSVIVAKVAEGSGDFGYNA
KTDEYVNMLEAGIIDPTKVTRVALENAASVSGMLLTTECVITEIKSAEPAMPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaaattcgatatcgagtcaagagacgctctaaaaagaggggttgat
gcattggctaatgcagtaaaagtaactttaggaccaaaaggtagaaacgtagtaatcgaa
aaatctttcggtgcacctcacgtaactaaagatggtgtttctgtagcaaaagaaatcgaa
cttgaagacagagtagaaaacatgggagcgcaaatggtaaaagaagttgcttccaaaacc
aatgatatcgcaggagatggtacaactaccgctactgttttggcacaggctatcgtaaga
gaaggtcttaagaatgtagctgcaggtgcaaacccaatggacttgaaaagagggatcgac
aaagcagtaactgctgttgttgctaacctaaaagaacaatctaagcaagtaggtgattct
acagaaatggtgaagcaagtggcttcagtttctgcaaacaacgacgaaactatcggatct
ttgatcgctgaagctttcggaaaagtaggtaaagaaggtgtaatcactgtagaagaagcg
aaaggtatcgatacaacagtagatgttgtagaaggtatgcaatttgacagagggtaccag
tctccatatttcgtgacaaaccctgagaaaatgacggttgaattggaaaacccgtacatt
cttttagttgagaaaaaaatctcttcaatgaaagaattgcttcctgttcttgagccaatc
gcacaaagcggaaaatctttattgattatttctgaagaagttgaaggtgaagctttagca
acattggtagtaaataaattaagaggttctcttaaaattgctgctgtaaaagctccagga
tttggtgacagaagaaaagctatgttggaagatatcgctatcttaacaggtggacaggta
atctctgaagagcaaggtttcacaatggaaaacgtatctcttgatatgttgggaactgct
gagaaagtatcgatcgacaaagacaacacaacgatcgtaaacggtggtggtgaagaaagc
aagatcaaaggcagagtaaaccagatcaaagctcagatggaaacgactacttctgactac
gacagagaaaaactacaggagagattggctaaattagccggtggtgttgctgtattgtat
gtaggtgcagcttctgaagttgaaatgaaagagaaaaaagacagagttgacgatgcattg
aacgctacgagagcagcggttgaagaaggtatcgttgcaggtggtggtgttgcttttgta
agagcaatttctgctttggcaaaccttgaaggaatcaatgctgatgaaactacaggtatc
aaaatcgtaaaaagagcgatcgaagagccattgagacaaatcgttgctaacgcaggaggt
gaaggttctgtaatcgtagctaaagttgctgaaggcagcggagacttcggatacaatgct
aaaactgacgagtatgtaaacatgcttgaagcaggaatcatcgaccctacgaaagtaaca
agagttgcccttgaaaatgcagcttcagtttctggaatgctattaacaactgagtgtgtg
atcactgaaattaagagcgcagagcctgctatgccaatgggaggtggaatgccaggaatg
atgtag
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