Chryseobacterium sp. C-71: LNP04_08550
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Entry
LNP04_08550 CDS
T08775
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ctur
Chryseobacterium sp. C-71
Pathway
ctur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LNP04_08550 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctur03400
]
LNP04_08550 (ruvB)
Enzymes [BR:
ctur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LNP04_08550 (ruvB)
DNA repair and recombination proteins [BR:
ctur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LNP04_08550 (ruvB)
RecFOR pathway proteins
LNP04_08550 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_22
AAA_16
TIP49
Rad17
AAA_14
TsaE
NB-ARC
nSTAND3
Sigma54_activ_2
NTPase_1
AAA_18
RNA_helicase
Bac_DnaA
NPHP3_N
AAA_28
AAA_24
AAA_PrkA
AAA_33
ABC_tran
AAA_17
NACHT
Motif
Other DBs
NCBI-ProteinID:
UFH33730
LinkDB
All DBs
Position
1869308..1870330
Genome browser
AA seq
340 aa
AA seq
DB search
MPDFLHPDKENYSDDELVQEEKIRPQSFKDFAGQRKTLENLEVFVAAAKNRGGALDHVLL
HGPPGLGKTTLSNIIANELGVNCKITSGPVLDKPGSLAGLLTNLEENDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMLETGPNARSVQISLNPFTLVGATTRSGMLTKPMLARFGIQSR
LEYYSIELLSTIIIRSARVLGVTIYEDAAIEIARRSRGTPRIANALLRRVRDFAEIKGNG
EIEINITTYALNSLNVDEFGLDEMDNKIMRVMIENFKGKPVGISALATSIAENPETLEEV
YEPFLIQEGFIIRTPRGREVTEKAYRHLNIAIPRNPGELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccagattttttacatcctgataaggaaaattattccgatgacgaactcgtacaggaa
gaaaaaattcgtccgcagagttttaaagattttgccgggcaaagaaaaactctagaaaat
cttgaagtttttgtggctgccgcgaagaatcgtggcggtgcactcgatcacgtacttctg
cacggtccgccaggtttaggaaaaacaactttatccaatattatcgccaatgaattggga
gtaaactgtaaaattacttcgggtcctgtattggataaacctggaagtttagctggatta
ctaaccaatttagaggaaaatgatgtcctttttattgatgaaattcacagactctcaccg
attgtagaagaatacctttattctgccatggaagattacaagatagacatcatgctggag
accggtccgaatgcaagaagtgttcagattagcttaaatcctttcacattagttggtgca
acgaccagaagcggaatgttgacaaaaccgatgttggcgagattcgggattcagagcaga
ttagaatattattcaattgaattgctttcaactattattatcagaagtgcccgtgtgttg
ggtgtcaccatttatgaagatgcggcgattgaaattgcaagaagaagtcgtggtacacca
agaattgccaatgcgttgttaagaagagttcgtgattttgcagaaataaaaggaaacggc
gaaattgaaatcaatattacgacttacgctttgaattctttgaatgtagacgagtttggt
ttagatgaaatggataataaaatcatgcgcgtgatgattgaaaatttcaaagggaaacct
gtgggaatttctgctttagcaacgtctatcgctgaaaaccctgaaactttagaggaagtt
tatgaaccatttttgattcaggaaggatttatcatcagaacaccaagaggacgtgaagtg
acggaaaaagcatatcgacatttgaatattgcgataccgagaaatccgggagaattattt
taa
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