Chryseobacterium sp. C-71: LNP04_10315
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Entry
LNP04_10315 CDS
T08775
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ctur
Chryseobacterium sp. C-71
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctur03016
]
LNP04_10315 (miaB)
Enzymes [BR:
ctur01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LNP04_10315 (miaB)
Transfer RNA biogenesis [BR:
ctur03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LNP04_10315 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
UFH30376
LinkDB
All DBs
Position
complement(2262374..2263810)
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AA seq
478 aa
AA seq
DB search
MQEKYIDETKQGEAFAIAEKTGNSKKLFLESYGCQMNFSDSEIVASILNDQGYNTTLKVE
EADLILLNTCSIREKAEQTVRMRLAQFKNLKKERPNMTVGVLGCMAERLKTKFLEEEQLV
DLVVGPDAYRDLPNLLKETEDGRDAINVILSKEETYADINPVRLGGNGVTAFVTITRGCD
NMCTFCVVPFTRGRERSRDPHSILEECKSLWESGYKEITLLGQNVDSYLWYGGGPKKDFA
KASEMQKATAVDFSKLLDSVAKAVPQMRIRFSTSNPQDMSLDVFRTMAKHDNICNYCHLP
VQSGSNRMLEAMNRQHTREEYLELIRKAKEIVPDISFSQDMIIGFCGETEEDHQDTLSLM
REVEYDYGYMFSYSERPGTPAHKKMEDDIPADVKQRRLAEVIALQGELSRKRMQGYVGRV
HSVLIEGISKKNKNQWKGRNSQNAVCVFDMLEGQKLGDIVDVFVHGNTQGTLLGETVE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagaaaaatatatagacgaaaccaagcagggagaggcttttgctattgcagaaaaa
accggaaattctaaaaaactctttttagaaagctacggctgtcagatgaatttttcagat
tctgagattgttgcttctattttgaatgatcagggttacaacacgacactgaaagttgaa
gaagcagatttgattttattaaatacatgttctatccgtgaaaaagctgagcagaccgtg
agaatgcgtcttgcacagttcaaaaatctaaaaaaagaaagacccaacatgaccgttggt
gttttaggttgtatggctgaaaggctcaaaactaagtttttagaggaagaacaattggtc
gacttagttgttggtcctgatgcttatagagatttacccaaccttttaaaagaaaccgaa
gacggaagagatgccatcaatgtaattctatctaaagaagaaacatatgctgacatcaat
cctgttcgtttgggcggaaatggtgtaacagcttttgtgacgatcacaagaggttgcgac
aatatgtgtacattctgcgtggttccttttacaagaggtagagaaagaagccgtgatccg
cactctattttagaagaatgtaaaagtctttgggaaagtggttataaagaaatcacgctt
ctcgggcaaaatgttgattcgtatctatggtacggtggcggtccgaaaaaagatttcgca
aaagcatcagaaatgcaaaaagccacagcggttgacttctctaaacttctcgattcggtt
gccaaagctgttcctcagatgagaatcagattctcaacttccaatcctcaggatatgagt
ttggatgtattcagaacgatggcaaaacatgataatatctgtaattactgccatttaccg
gttcaaagtggaagcaacagaatgcttgaagccatgaacagacaacatacccgtgaagag
tatttagaattaataagaaaagcgaaagaaatcgttcctgatatttcgttttctcaagac
atgatcattggtttttgtggtgaaactgaagaagatcatcaagataccttaagcctgatg
agagaggtagaatatgactatggttatatgttctcttactccgaaagaccgggaactccg
gctcacaaaaaaatggaagatgatattcctgctgatgttaagcaaagacgtttagcagaa
gtaattgctttgcaaggggaattatcaagaaaaagaatgcagggttacgtaggaagagtt
cacagtgttttaattgaaggaatttctaagaaaaacaaaaaccaatggaaaggcagaaac
tctcaaaatgcagtttgcgtttttgatatgttggaaggtcagaaattgggtgacattgtg
gatgtttttgttcacggtaatacgcaaggcacgcttttaggggaaacagtggaataa
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