Chryseobacterium sp. C-71: LNP04_12940
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Entry
LNP04_12940 CDS
T08775
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ctur
Chryseobacterium sp. C-71
Pathway
ctur00521
Streptomycin biosynthesis
ctur00523
Polyketide sugar unit biosynthesis
ctur00525
Acarbose and validamycin biosynthesis
ctur00541
Biosynthesis of various nucleotide sugars
ctur01100
Metabolic pathways
ctur01110
Biosynthesis of secondary metabolites
ctur01250
Biosynthesis of nucleotide sugars
Module
ctur_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LNP04_12940 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LNP04_12940 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LNP04_12940 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LNP04_12940 (rfbB)
00525 Acarbose and validamycin biosynthesis
LNP04_12940 (rfbB)
Enzymes [BR:
ctur01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LNP04_12940 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Sacchrp_dh_NADP
KR
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
UFH30881
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All DBs
Position
complement(2822524..2823615)
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AA seq
363 aa
AA seq
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MKNIIITGGAGFIGSHVVREFVKNNPDSTIINLDALTYAGNLENLKDIENEPNYVFEKAD
ITKPEELRKVFEKYNPDAIVHLAAESHVDRSITDPNAFINTNVNGTANLLNLCIEFWTLN
PDHTHGRFPNEPRQNLFYHVSTDEVYGSLGETGFFLETTPYDPQSPYSASKAASDHLVRA
YGNTYGMPFILSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHA
KAIHQIFNESKTGETYNIGGFNEWQNIDLVKELIKQMDEKLGNPAGHSEKLITYVKDRPG
HDKRYAIDATKLNKDLGWKPSVTFEQGLGKTIDWFLENKEWLENVTSGDYQKYYASQYTN
DSN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacattatcatcacaggcggagcaggatttataggctcgcacgttgtaagagaa
tttgttaaaaataatcctgattcaacaatcatcaatcttgatgctttgacgtacgccgga
aaccttgagaatttaaaagatatcgaaaacgaacctaattacgttttcgaaaaagcagac
attacaaaacctgaagaattaagaaaggtttttgaaaaatacaacccagacgctattgtt
catttggcagcagaaagtcatgttgacagaagcatcacagatcccaatgctttcattaac
acgaatgtaaacggaactgcaaatcttttgaatctttgtatcgaattctggacattaaat
ccagatcacactcacggaagatttccaaatgagccaagacaaaacttattttaccatgtt
tcaaccgatgaagtttacggaagtttaggcgaaacaggtttttttcttgaaacaactcct
tacgacccgcaatctccgtattctgcaagtaaagcagcttctgaccacttggtaagagct
tacggaaatacatatggaatgccattcattctgtcaaattgctctaacaattacggcccg
aatcacttccctgagaaattgatcccgctttgtatttctaacatcatcaatgaaaaacca
ttgccaatttatggtgacggaaaatatacaagagattggttatttgtcatagatcatgca
aaagcgattcatcagatttttaatgaatcaaaaaccggagaaacatataacatcggaggc
ttcaatgagtggcagaatattgatttagtgaaagagttaattaagcagatggatgaaaag
cttggtaatccggcaggacattcagaaaaattaattacttatgtaaaagacagaccgggt
cacgataagcgttacgcaattgatgctacaaaactgaataaagatcttggctggaaaccg
tctgttacttttgagcaaggtttaggaaaaactattgattggtttttagaaaataaagaa
tggctggagaatgtaacgagcggagattatcagaaatattatgcttcgcagtatacgaat
gactcgaattaa
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