Chryseobacterium turcicum: LNP04_13060
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Entry
LNP04_13060 CDS
T08775
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
ctur
Chryseobacterium turcicum
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctur01002
]
LNP04_13060
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ctur01011
]
LNP04_13060
Peptidases and inhibitors [BR:
ctur01002
]
Cysteine peptidases
Family C40
LNP04_13060
Peptidoglycan biosynthesis and degradation proteins [BR:
ctur01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
LNP04_13060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
ANF_receptor
LppC
Z1
Motif
Other DBs
NCBI-ProteinID:
UFH30904
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Position
2851246..2852967
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AA seq
573 aa
AA seq
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MIKRFFLLSGLCMFLSLSAQKTHTVIKGDNPYNVSKKYGITIAELEKLNPKIKDGKFSIG
DVLNVKAGNATVVKNTTASSSAKTGRIILQPKQTIYGITKQYRISETDLRKLNPDLDSHT
KIGDEITLPLESIKKYGGSEAVVATAKPVVAPAETVSPGNSKTKIDSGNERSSSIQSSSN
QDEYATYTVEQGDTVFSIVNKFGVTIDELVALNPDLSKGLKAGMILKIKKLDAAYIKKNG
DALSVVLMLPFGYSTNETQYRAMALDFLTGAKLAIERNAANGQKLDIKIVDSGNEASFKS
SLTQINPNNTDLIIGPFFKSNVIDLLDFTKTQKIPVVAPFANSPELYNYSNLIIVETNDQ
AYADKIVEEVKTVYSDQKIYVVADAKKDNANYIKANLEKVLKNANVTLVNSASEIQLDQN
MMTGQSAPVIAILASDNDTVGEAFSSRMIALSKEVQGMKAFSLYSVPSFEKKVDELSQAS
LVYLMDRKINAEGSFEKEILAAYKAKYCKTPGKYAVIGFDVVNDMLARENKKGEIFKQMN
KVQTQLATKFEFVKSKANGAYVNTGFRVITLTP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaggttttttttactatctggtttatgtatgtttctgagcttatctgcacag
aaaacacacacggttataaaaggtgataatccttataatgtttcaaaaaaatatggcatt
accattgctgaattagagaaactgaatccaaaaattaaagacggaaagttttcaattggt
gatgttcttaatgtaaaggctggaaatgctacagttgtaaaaaacacaacggcgtctagt
tctgcaaaaaccggaagaattattcttcagccaaaacagacgatttacggtattacaaaa
cagtacagaatttctgagacagatttacgaaaattaaatcctgacttagattcgcacacg
aaaattggggatgagattactctgcctcttgaaagcatcaagaagtatggtggaagtgaa
gccgtagtggcaacagcgaaacctgtcgttgcaccagcagaaacggtgtcgccaggcaat
agcaaaaccaaaatagattcaggaaacgagagatcttcttctatacagtcttcttctaat
caggacgagtatgcgacgtataccgttgagcagggagatacagttttctctatcgtcaat
aaattcggagtgacgattgacgagttggttgccttaaatccagatttgtcaaaaggttta
aaagccggcatgattcttaaaataaagaaacttgacgcagcgtacattaagaaaaacggt
gatgcgttgagcgtggttttgatgttgccatttgggtacagtaccaacgaaacacagtac
cgcgcaatggccttagacttccttaccggagcaaaattggcgattgagagaaacgcagcg
aacggtcagaaactggatatcaaaattgtggattctggaaacgaagcttcatttaaaagt
tctcttacacagattaatccaaataatacagatttaattatcggtccattcttcaaatcg
aatgtaattgatcttttagattttacaaaaactcagaaaatacctgtggttgcgccattt
gccaactctccggaattatataactacagcaatttaattattgtagagaccaacgatcag
gcatacgctgataagatcgttgaggaagtgaaaacggtatactcagatcagaaaatatat
gtagtggcagatgctaagaaagataatgccaattacatcaaagcaaatcttgagaaagta
ttaaaaaatgcaaatgttactctagtgaattctgcatcagaaattcagttagatcaaaac
atgatgacgggtcaatctgcaccggtgattgcaattttggcaagtgataatgatacagtg
ggtgaagctttctccagccgaatgattgctctttctaaagaagttcagggcatgaaagcg
ttcagtttatattctgttccaagctttgagaaaaaggttgatgaattgagccaggcgagt
ttagtttacttaatggatagaaaaataaatgcagaaggcagttttgaaaaagaaatatta
gcggcttataaagctaaatattgcaaaactcctggtaaatatgcagtgattggttttgat
gtcgtcaatgatatgttggcaagagagaacaaaaaaggtgagattttcaagcagatgaat
aaagttcagacgcaacttgcaacaaagtttgaatttgtaaagtctaaagccaacggtgct
tacgtcaataccgggttccgtgttataacacttacaccttaa
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