Chryseobacterium sp. C-71: LNP04_13525
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Entry
LNP04_13525 CDS
T08775
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ctur
Chryseobacterium sp. C-71
Pathway
ctur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LNP04_13525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctur03021
]
LNP04_13525
03400 DNA repair and recombination proteins [BR:
ctur03400
]
LNP04_13525
Enzymes [BR:
ctur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LNP04_13525
Transcription machinery [BR:
ctur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LNP04_13525
DNA repair and recombination proteins [BR:
ctur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LNP04_13525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UFH30994
LinkDB
All DBs
Position
2935088..2936083
Genome browser
AA seq
331 aa
AA seq
DB search
MAILQFIKPDKVILLNSDEFKGQFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQVRLKATAENQTNEQVVAKVSGQTVITAGDLGKSIN
GFEILNPELMICNLNSDVTFEITFNVEKGRGYVPSDQNKSNNAPVGTIAIDSIFTPIKKV
QYSIENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLADMDLSVRALNCLKAAEVETLGELVSYSKSDLMKFRNFG
KKSLTELEELVHSKGLNFGFDVAKYKLDADN
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttacaattcataaaacccgataaagtaattctacttaactctgatgaattt
aaaggtcaattcgaattcagacctttagaaccaggtttcgggcttacaatcggtaatgct
ttgagaagagtgttgctttcttctctggaaggatacgctatttcatctatcaaaatagaa
ggtgtagagcacgaattttcaacgattccaggagtaattgaagacgttaccgaaattatt
cttaaccttaagcaggtaagattaaaagctacggcagaaaaccaaactaacgaacaggtt
gttgctaaagtttccggtcaaactgtaattactgctggggatttaggtaaatcgatcaac
ggttttgagattcttaatccagaattgatgatctgtaacctaaactcagatgtaactttc
gaaatcacgtttaatgtagaaaaaggaagagggtatgtaccttcagaccagaacaagtca
aacaatgctcctgtaggaactattgctattgactctatttttacgccgatcaaaaaagtg
cagtacagcattgaaaattatcgtgtagagcaaaaaacagactacgaaaaattagtatta
gatattgaaactgacggttctataagccctcagaatgctttaactgaagcttctaagata
ttgatttatcacttcatgttgttctctgatgagagaatcactctagaaactgaagctgta
aaggcatctatccaatacgatgaagaaactcttcacacaagacaacttcttaagtctaaa
ttagcagatatggatctttctgtaagagccttaaactgtctaaaagcggctgaagttgaa
acattgggagaactagtttcttacagtaagtctgatttgatgaaattcagaaattttggt
aaaaaatctttgacagaactagaagaattagtgcattcaaaaggtcttaacttcggtttc
gacgttgcaaaatataaattagacgctgataattaa
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