Chryseobacterium sp. C-71: LNP04_14410
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Entry
LNP04_14410 CDS
T08775
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ctur
Chryseobacterium sp. C-71
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctur03400
]
LNP04_14410 (radA)
DNA repair and recombination proteins [BR:
ctur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LNP04_14410 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
AAA_22
DnaB_C
DUF7125
Lon_C
AAA
AAA_24
nSTAND3
AAA_14
CobU
AAA_5
SLFN-g3_helicase
AAA_16
nSTAND_NTPase5
Rad51
NTPase_1
NACHT
RsgA_GTPase
ATPase_2
ABC_tran
DUF2321
divDNAB
Viral_helicase1
Perilipin
DZR
Cas_APE2256
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UFH31158
LinkDB
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Position
complement(3122610..3123959)
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AA seq
449 aa
AA seq
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MAKLKTAYFCQNCGSQYPQWTGQCKNCLEWNTLVEEIVEKTSSKTPPFSKSKQNVINIIE
VEAVEEPRIKTPSDELNRVLGGGIVLGSVTLIGGEPGIGKSTLLLQLALKMKKKVFYVSG
EESASQIKMRADRLADVKNPNCFLYTETSLEKILHESKKLEPDFVIIDSIQTLQSQLIES
SPGTVSQIRECSNEIIKYAKENNVPVFLVGHITKDGQIAGPKVLEHMVDVVLNFDGDRNH
LFRLLRANKNRFGSTAEIGIYEMVSQGLKEIKNPSEILITKKFEELSGNSVAVTLEGNRP
MLLEIQALVSTAVYGTPQRSCTGFDSKRLNMLLAVLEKRAGFQLGAKDVFLNITGGIKTD
DPALDLAVVASILSSNEDIAISEHFCFAGEIGLSGEIRPVAQVEQRITEAEKLGYEKIFV
SNLNKIPKRKFGIKIEEVSKVEDFHERLF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactaaaaacagcttacttctgtcaaaactgtggttcgcaatatccgcaatgg
acggggcaatgtaaaaattgtcttgaatggaatactttggtagaagaaattgtagaaaaa
acatcttcgaaaactccacctttttcaaaatcaaaacaaaacgtcatcaacattatcgaa
gttgaagccgtagaagaaccaagaataaaaactccgtctgatgagctcaacagagtttta
ggaggtggaattgttttaggctctgtcacattgattggcggtgaacccggaataggaaaa
tctacccttcttcttcagcttgccttgaaaatgaaaaagaaagttttttatgtttctggt
gaagaaagtgcttctcagattaaaatgagagccgatcgtttggcagatgtgaaaaacccc
aactgctttctttatacagaaacttctttagaaaaaatacttcatgaatctaaaaagctg
gaacccgattttgtaatcattgactctattcaaactttgcaatctcaactgattgaaagt
tcgccaggaaccgtttctcaaatccgcgaatgttctaatgagattattaaatatgccaaa
gaaaataatgttcctgtatttttagtcggtcacatcacaaaagacgggcaaattgcaggg
ccaaaagttttggaacacatggtcgatgttgtcttaaactttgacggagacagaaaccat
cttttcagattattgagagctaataaaaaccgtttcggttctactgcggaaatcggaatt
tacgaaatggtttcgcagggtttaaaggaaataaaaaatccgtcagaaattttaattact
aaaaaatttgaagagctttcaggaaattctgttgccgtaactttagaaggaaaccgaccg
atgcttcttgaaatccaggctttggtaagcaccgctgtttatggaactccgcagagaagc
tgtacaggatttgattctaaaagactgaatatgcttttggcagttttagaaaaacgagca
ggcttccaactgggtgcaaaagatgttttcttaaatattaccggcggtataaaaaccgac
gatcctgctttagatttagcagttgttgcatcaattctttcatcaaatgaagatattgcg
atttctgagcatttttgttttgcaggggaaataggcctcagtggagaaattcgtccggtg
gcgcaggttgaacaaagaattactgaagctgagaaattgggctatgaaaagattttcgtt
tcaaatttaaataaaattccaaagagaaaatttgggattaagattgaggaagtgagcaaa
gttgaggattttcacgaaagactgttttaa
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