Chryseobacterium sp. C-71: LNP04_14950
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Entry
LNP04_14950 CDS
T08775
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ctur
Chryseobacterium sp. C-71
Pathway
ctur03030
DNA replication
ctur03430
Mismatch repair
ctur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LNP04_14950
03430 Mismatch repair
LNP04_14950
03440 Homologous recombination
LNP04_14950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctur03032
]
LNP04_14950
03400 DNA repair and recombination proteins [BR:
ctur03400
]
LNP04_14950
Enzymes [BR:
ctur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LNP04_14950
DNA replication proteins [BR:
ctur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LNP04_14950
DNA repair and recombination proteins [BR:
ctur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LNP04_14950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
UFH31259
LinkDB
All DBs
Position
complement(3248792..3249556)
Genome browser
AA seq
254 aa
AA seq
DB search
MNLKLHKPLCVFDLETTGTNVGKDRIVEICILKVNPDSSRESKTWRVNPEMPIPVSSSEI
HGIYDEDIKDAPTFKEIAPKIVEMITGTDLGGFNSNRFDVPLLAEELLRADFDFDLSKFK
LVDAQTIFHKKEPRNLGAAYQFYCGKTLENAHSAEADVLATFEVLDAQVGKYDDISNEVA
ELSEFSTQNKFADLAGMIHYNAKDQEIFAFGKYKGQVVKEVFQKDMGYFGWLQNADFPLY
TKKVFTKIQLSSKF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaactacataaaccgctttgtgttttcgatcttgaaacaaccggaacaaac
gttgggaaagaccgaattgttgaaatctgtattttaaaagtaaatcctgattcttcgaga
gaaagtaaaacatggagagtaaatcctgaaatgccgattcctgtttcgtcaagcgagatt
cacggcatttatgatgaagacattaaagatgcgccgactttcaaagaaattgctccgaaa
attgttgaaatgattacaggaacggacttgggaggttttaattcaaaccgattcgatgtg
cctttgctggctgaagagttgcttcgtgcagatttcgattttgatttgagtaaatttaaa
ttagtcgatgcacaaacgattttccataaaaaagaaccaagaaatttaggtgcagcgtat
caattttactgtggaaaaactttagaaaatgcgcattctgctgaagctgatgttttggca
acgtttgaagttttggatgctcaagttggaaaatacgatgatatttctaatgaagttgct
gagctgagtgaattttctactcagaataaatttgccgatttagccggaatgatacattac
aatgcaaaagaccaggagatttttgctttcggaaaatataaaggacaagttgtgaaagaa
gttttccagaaagacatgggatatttcggatggttacaaaacgctgattttcctttgtac
acaaaaaaagttttcacaaaaattcagctttcaagtaagttttaa
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