Chlamydia trachomatis G/9301: CTG9301_03215
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Entry
CTG9301_03215 CDS
T01906
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ctv
Chlamydia trachomatis G/9301
Pathway
ctv02020
Two-component system
ctv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ctv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CTG9301_03215
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CTG9301_03215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctv03021
]
CTG9301_03215
Transcription machinery [BR:
ctv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CTG9301_03215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DNA_pol3_delta_C
HTH_23
IML1_N_fung
HTH_11
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
ADH97265
LinkDB
All DBs
Position
689271..690581
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AA seq
436 aa
AA seq
DB search
MLHQHQTASVALCPALHLQQGLDMLQMPVAELATFVSQQITINPCFDLDSLDSPPESFSF
FPISEQHPFTETLSAYLLRQIDTNFASSQERTIAQYIVGNLSPEGLFLENPSLVAADLNV
SEHLFQKVWQRIQQLHPLGVGAPSLQSYWVSLLQTSPHKEALAIIRNHFPRLARCDFTTI
ARKMHATTTEILTFLRHAFASIPWCPAAGFSETLHPPAPALPDAYLSFSRNSSWDVSINK
DCLPSIRLNNTVLDIYPSLPREEKDHLSQQIRAAKQLLRNVKKREETLLAILRVLIPYQE
EFLLKKRTSPKAFSVKQIARELSLHEATVCRAIDNKTLATPVGLLPMRSLFPQAVGSCPD
QSKATILHWIHQWISTEKHPLSDAAISQKIIEKGIPCARRTVAKYRSQLNILPAHQRKHL
CSVLTTTRTENSRHTI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcagcatcaaacagcatctgtagctctttgtcctgctttacatcttcaacag
ggactggatatgctacagatgccagttgctgaactcgcaacatttgtgtcccagcaaatc
actatcaatccctgttttgatctcgatagcttagattctcctccagaatctttttcgttt
ttccctattagcgaacagcatccttttacagaaactctatccgcataccttcttcggcaa
attgataccaattttgcctcttctcaggaacgtactatagctcagtatattgtaggcaac
ctctccccagaaggactctttttagaaaatcctagtcttgtggctgcagatttaaacgtc
tccgaacaccttttccaaaaggtatggcaacgtatccaacaattacatcctttaggagtc
ggagcgccttccctacagtcctactgggtatcgctactacagacatctccccataaggag
gctttagctattattcgcaaccatttccctagattagctcgttgtgatttcactactatc
gctaggaaaatgcatgcaaccacaacagagattcttacgtttcttagacacgcttttgct
tccatcccttggtgtccagcagcaggcttttccgagacacttcacccccctgctccagcg
cttcctgatgcctacctttccttctcgcgaaactcttcttgggatgtctctattaataaa
gattgtctcccctctattagactcaacaacaccgtactagatatctatccttctcttcct
cgtgaagagaaagaccacctatcgcaacaaatccgagcagcaaaacaattgcttcgcaat
gtaaaaaaacgagaagaaacgttattggctatccttcgagttctcatcccctaccaagaa
gagttccttcttaaaaaacgcacctctcctaaagctttttctgtaaaacaaatagctcgc
gaactctctcttcatgaagctaccgtttgtcgtgccattgataataaaacgttagcaacc
cctgttggattactccctatgcgatcgctatttccacaagcggttggatcctgccccgat
caatctaaagcaactattttgcattggatccaccagtggatttctacagaaaaacatcct
ctatctgatgcagctattagccaaaaaattattgagaagggcatcccctgcgcacgacgc
acagtagccaaatatcgttcgcaactgaatatcctccctgcgcaccaacgcaaacaccta
tgctctgttttaacaacaacacgcacagagaattctcgacatactatctaa
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