Chlamydia trachomatis G/9768: G9768_01710
Help
Entry
G9768_01710 CDS
T01907
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ctw
Chlamydia trachomatis G/9768
Pathway
ctw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G9768_01710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctw03400
]
G9768_01710
DNA repair and recombination proteins [BR:
ctw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G9768_01710
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G9768_01710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_29
UvrA_inter
UvrA_DNA-bind
RsgA_GTPase
AAA_16
nSTAND1
AAA_23
DnaJ_CXXCXGXG
Viral_helicase1
AAA_33
Anti-TRAP
cobW
NACHT
AAA_21
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADH18025
LinkDB
All DBs
Position
376309..381669
Genome browser
AA seq
1786 aa
AA seq
DB search
MSSIVRLSGITVRNLKNITVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYLATLPS
FFATKLDSLPDPSVKKIEGLSPTVAVKQNFFEQHIHATVGSTTEINSYLALLFSLEGQAY
DPVTLHPLTLYSKEKILSEIAAIPDGTQLTLLAPLPARDVLTVRECLRQGFTKVLIDEEV
VPIHKFLTTGIPVPGQLIVDTLIKNTSNTPRLKVSLFTTLDIGHGECSLHFDNQKRVFST
QATLPETQQTYAPLSPDLFSSHSHKDRCPQCQGSGIFISIDDPCIIQQTLSIEDNCCPFA
GNCSTFLYRTIYQSLADSLGFSLSTPWQNLSPEIQHIFLYGKEGLSIPVKLFDGTLGKKT
QTHKQWKGVLNEIGEKIRFSNKPARYLPKGTSYTVCPRCNKTGLSDYANATRWHGKSFAD
FQQMSLQELFIFLNQLPEKELAIEEVIQGFKSRLTILIDLGLPYLSPERAIDTLSGGERE
RTALAKHLGAELIGVMYILDEPSIGLHPQDTHKLMNVIRRLRDQGNTVLLVEHDEQMISL
ADRVIDIGPGAGIFGGEVVFNGSPREFLAKSDSLTAQYLRQEQHISVPAKRTNSLGTITL
SKANKHNLKDLTVSIPLGQMTVVTGVSGSGKSSLINDTLVPCVEEFIEQGFCSTLSIQGA
LSRLVHINRDLPGRSQRSIPLTYIKAFDEVRQLFAEQPRCKTLGLTKSHFSFNTPLGACA
ECGGLGSITTTDNRDSITCPSCLGKRFLPQVLEVRYKNKTIADILEMTAYEAKNFFLDEP
SIHQKIETLCTLGLQYLPLGRPLYSLSGGEIQRLKLAYELLAPVKHPTLYVLDEPTTGLH
THDVKQLIYVVQSLIHQGHSVIIIEHNMHVVKVADYILELGPEGGNKGGYLIASCSPEEL
IHKHTPTAIALRPFLSSPQELPYLPDPSPKPPVPAAITIANAHQHNLKHIDLSIPRYALT
AVTGPSASGKHSLVFDILHAAGNIAYAELFPPYIRQALIKKTPLPAVDKVTGLSPVIAIE
KTSASRNSNHSVASALEISEMLESLFTRIGHPYSPISGDALRTISPETIAEELLTHYTKG
YVTITVPFPKEEEFFSYTQEMLQEGFLKLYANEQFYDLDGPFPTSLENPALVIHHVKILE
KNLPSLLASLTLAFSKASSVCLHIEYAGTSLSKTYRQGLQDASRNLFPNIETPSILNHES
YLCPLCHGKGFLSTCSILPHKKRFAQHTPISLFTSLFPNQDPSPIYPLLNELGIPSIALF
QEIDVLSFESLCLGTQQHLGLNALCTKAMLMESEEDFPPDLISKTPCNQCQGLGVYTYKH
CTRIHSISLSEIYQSNVAFLKKLLLSVEEEPSLVQDILSRLDLLDRVGLGYVILGQEQQS
LSDGEHYRLLLAKAFSSGLTDVIYLLEDPLAGIHPEDAPCLLAVIKKLVTNHNTVIVTDR
EGSLAEHADYLLHLGPEPGPNGGYLLSTSALKQSQPVLCNTRSSEETPQLSVSVSTSTIQ
IENLAFPLQRLSTISGVSGSGKTTLLNSIYEHGCAILEKDPSVFSEIIFLDSYPQIASSR
SDISTYFDIAPSLRNFYASLTQAKALNISVSMFSPNTKQGQCSDCWGLGYQWIDRAFYAM
EKRPCPTCGGFRVQPLIQEVVYEGKHFGQLLQASLNEVAETFSFLKKIQKPLHTLITNGL
GYLSLGQNMASLSLSEKIAIKLTKYLFLPPKHPTLFLLDEIATSLDNQQQSALLVQLNTL
ASLGHTVVIIENHPAFSQQADFWIQMGRKTDNHILFAGPNPNLSFT
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctatcgttagactttctggtattactgtaaggaatttaaaaaacattacagta
gagttttgtcctcgagagatcgttttgttcaccggggtttctggatccggaaagtcttct
cttgctttcaatactatttatgccgcaggaagaaaacgctaccttgctaccctcccctct
ttctttgcaacaaagctagactccttaccagatccctccgtaaaaaagatagaaggattg
tctccaaccgtagccgttaagcaaaactttttcgaacaacacatacatgcgacagtcggt
agtacaaccgaaattaactcgtatttagccctacttttctccttagagggccaagcctat
gatccggttacactacaccctctaactctatacagtaaggaaaaaatcctttctgaaata
gctgccattccagatggaactcaactgactttgctcgctcctcttcccgccagggatgtt
cttaccgttcgagaatgtctccgtcaagggtttaccaaagtcctcattgatgaagaggtt
gttcctattcataagtttcttacaacaggcattcctgttcccggtcaactcattgtcgat
acgttgatcaaaaatacctctaacactccgcggttaaaagtcagcttatttacaacctta
gacatcggtcatggtgaatgctccttacacttcgataatcagaaacgagtcttttccaca
caggcgactcttccagaaacacaacaaacctatgcgccgctatccccagatcttttttcg
tcgcacagtcacaaagatcgttgtccacaatgccaaggttcaggaatctttatatccatc
gatgatccctgtatcatccagcaaacgctctccatcgaagacaactgctgtccttttgca
gggaattgctccaccttcttatatagaaccatctatcaatctctagctgatagcctagga
tttagtctcagcactccgtggcaaaatctttctcctgaaatccaacatatttttttatat
gggaaagaaggtctctctatcccagtaaagctgtttgatggaactttaggtaagaaaacc
cagacacataagcaatggaaaggtgtgctcaatgaaattggagaaaaaattcgattttca
aataagcctgctcgctaccttcctaaagggacttcctatacagtatgccccagatgtaac
aagactggactcagcgactatgctaatgctacccgatggcatgggaaaagctttgcagac
tttcaacaaatgtctcttcaagagttatttattttcctgaatcaacttcctgagaaagag
ctcgctattgaggaagtaatccaaggattcaaatcgcgacttactattctgatagatctt
ggtcttccctacctttctccagaaagagctattgatactctttccgggggagaacgggaa
cgtacggccttagctaagcatctaggtgccgaactcatcggagtcatgtatatcctggat
gagccttctattgggctacatcctcaggatacccataagcttatgaatgttattcgaaga
ctccgtgatcagggaaacactgtcttactcgttgaacatgatgagcagatgatttctctc
gcagaccgggtcattgatatcggcccaggagctggtatttttggtggcgaagttgtcttc
aatggatctcctagagaatttctggcaaagagtgactctttgaccgcacaatatctccgt
caagagcaacatatttcggtccctgctaaacgtacaaactccttagggacaattacctta
tctaaagccaataagcataatcttaaggacctgacagtttcaattccattaggacaaatg
actgtcgtcaccggagtctctggttctgggaaatcttctcttatcaacgatacactagtc
ccttgtgtggaagagtttattgaacagggattctgttccactctatctattcaaggagcc
ctctctcgccttgtccatattaatagagatcttccaggacgctcacaacgatctatccct
ttgacctatatcaaagcttttgacgaggttcgtcagttattcgcagaacaacctcgctgt
aaaaccttaggactcactaaaagccactttagcttcaacacgcctctaggagcctgtgca
gaatgtggaggcctaggatctataacaacgactgataaccgcgattccataacctgtcct
tcctgtttagggaaacgattcctccctcaagtattagaagtccgctataaaaataaaacg
attgccgacattcttgaaatgacggcctatgaagctaaaaacttctttttagatgagcct
agtattcatcaaaaaatcgaaaccttatgcactctgggactacaataccttcctctagga
agacctctctatagcttatctggaggagaaatccagagactcaagcttgcatatgagtta
ttggctccagttaaacaccctactctctatgttcttgatgaacccacaacaggcctccat
acccacgatgtcaaacaacttatttatgttgtgcaatcccttattcatcaagggcactcg
gtgatcatcatcgagcataacatgcatgtggtgaaagttgcagactatatactggaactt
ggtcctgaaggaggaaataaaggcggttatctcatagcttcttgctctccagaagagctg
atccataaacatactccaacagctatagctctccgtcctttcctatcttctcctcaagaa
ctcccttatctacctgatccgagtcccaaacctcctgtacccgccgccattactattgca
aacgctcaccagcataatttaaaacatatcgatctctccatacctcgatatgcgcttact
gctgtgacaggtccatccgcttccgggaaacattcccttgtatttgatattctgcatgca
gcaggaaacatcgcttacgcagagctattccctccctatatccgacaagctctcataaaa
aaaactcctcttcctgctgttgataaagtaacaggactatcccctgttatcgcgatagaa
aaaacgagcgcctcgagaaattccaatcattctgtggcttctgcattagaaatctcagaa
atgctagaaagccttttcacacgaatcggccatccttattctccgatttctggtgatgca
ctaagaactatttctcctgaaacgattgctgaagaattgctcacgcattacacgaaaggc
tatgtaacgattactgttcctttccctaaagaggaagagtttttctcttatacgcaagag
atgcttcaggaagggtttttaaaactttatgctaatgaacagttctatgatttagatggg
cctttccctacttctttagagaacccagctctagtcatccaccatgtcaaaattttagaa
aaaaatctgccttctcttttggcttctcttactttagcctttagtaaagcttcttctgtc
tgtctgcatatcgaatatgctggaacaagcttatctaaaacataccgccaaggattacaa
gatgcttctaggaacctattccctaatatagaaacaccctctatcttgaaccatgagagc
tacttatgccctctctgtcatggaaaaggcttcctatccacttgttctattcttcctcat
aagaaacgtttcgcacagcataccccaatttccttattcacaagcctatttcctaaccag
gatccttcaccgatctatcctcttctgaatgaactagggatcccttccattgctctattc
caagaaatagatgttctttcttttgaatctctttgcctaggaacacaacaacatctggga
ttgaatgctctttgcacaaaagcaatgttaatggaatccgaagaagatttccctcccgac
cttatctccaaaactccgtgtaaccaatgtcagggtcttggcgtatacacctacaagcat
tgcacccgtattcacagcatttccctatcagaaatttaccaatccaatgtcgcttttctt
aaaaagctcttactttctgtagaagaggaaccctctcttgttcaagatatccttagtaga
ttggaccttctagatcgagttgggttaggctatgttatcctcggacaagaacaacagtct
ttgagtgacggagagcattataggcttctattggcaaaagctttttcatcaggtctcact
gatgttatctatcttttagaagatcccttagcagggattcacccagaagatgctccttgt
ttgcttgctgttattaaaaaactcgtgaccaaccataatacagtaatagtgacggataga
gaaggctctcttgcggaacatgctgattacctgcttcacctgggtcctgaacctggtcct
aacggaggctatctcttatcaaccagcgctcttaaacaatctcaaccggtactttgcaac
acacgctcttccgaagaaacaccacaactttctgtctcagtatccacttctacgatccaa
attgagaaccttgctttccctttacaacgactctcgactatttctggtgtatcaggatct
ggcaaaacaaccttactaaatagcatttacgaacatggctgcgctattcttgaaaaggat
ccttctgtattctcagaaattatttttctagattcctatccccaaattgcatcttctcga
tccgatatcagcacttattttgatatcgctccttcattaagaaatttctacgcttctctg
actcaagcaaaagctttaaacatctcagtttctatgtttagtccaaataccaaacaaggg
caatgttcggattgttggggactaggatatcaatggatagatcgagccttttatgctatg
gaaaaacgtccttgtccaacatgtggaggattccgtgtacaaccactcatacaagaagtt
gtgtatgaagggaaacatttcggccagttattacaagcctctttaaatgaagtagctgaa
actttttctttcttaaaaaaaatccagaaacctttacacaccttaattacaaatggtctt
ggctacttatcattgggacaaaatatggcctctctgtctctaagtgaaaaaattgccata
aaattaactaaatatctattccttcctcctaaacatcctactttattcttactagatgag
atagctacctctcttgacaatcaacaacaatccgctctgctcgtccaactcaacaccttg
gcgtctttaggacatacagtagtgatcatagaaaaccaccccgccttctctcagcaagct
gatttttggatacaaatgggacgtaaaacagataatcacattctctttgcaggacctaat
cccaatctatctttcacttaa
DBGET
integrated database retrieval system