Acetivibrio thermocellus DSM 1313: Clo1313_0246
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Entry
Clo1313_0246 CDS
T01933
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ctx
Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctx03032
]
Clo1313_0246
03036 Chromosome and associated proteins [BR:
ctx03036
]
Clo1313_0246
03400 DNA repair and recombination proteins [BR:
ctx03400
]
Clo1313_0246
DNA replication proteins [BR:
ctx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Clo1313_0246
Chromosome and associated proteins [BR:
ctx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Clo1313_0246
DNA repair and recombination proteins [BR:
ctx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Clo1313_0246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
VWA_3
Phage_Mu_Gam
RNA_polI_A14
Peptidase_C80
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
ADU73340
LinkDB
All DBs
Position
268952..269227
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AA seq
91 aa
AA seq
DB search
MNKTELIASMAEKSQLSKKDAEKALNAFIESVEEALAKGDKIQLVGFGSFEVRERAERKG
RNPQTKEEIVIPATKTPIFKVGKGLKELVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataagacagagttaatagcaagtatggctgaaaaaagtcaattatcaaagaaagat
gctgaaaaagctcttaacgcttttatagaaagtgttgaggaagcacttgcgaaaggtgac
aaaattcagttggtaggatttggctcttttgaagtaagagaaagagctgaaagaaaggga
agaaaccctcagacaaaagaagaaattgtgattcctgctactaagactccaattttcaag
gttggaaaaggcttgaaggaattagtaaacaaatag
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