Acetivibrio thermocellus DSM 1313: Clo1313_0490
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Entry
Clo1313_0490 CDS
T01933
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctx03016
]
Clo1313_0490
Enzymes [BR:
ctx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Clo1313_0490
Transfer RNA biogenesis [BR:
ctx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clo1313_0490
Prokaryotic type
Clo1313_0490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADU73579
LinkDB
All DBs
Position
536354..537088
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AA seq
244 aa
AA seq
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MRNVKLIIEYDGTNYHGWQKQKNAKTVQDTIERAIKGLTGEKVDLIGASRTDFGVHALGQ
VANFITNSGIPGDRFSYALNRMLPDDIVIKESQEVDMDFHARYKAKGKRYRYLIYNSQFP
SALLRHRTYHVSHKLDFESMQRAASYFLGTHDFSAFRSSGSSAKTSVRTITDVSLEREDK
IVKFEIAGDGFLYNMVRIIVGTLMEVGIGKIRADEIPQIIESRKRKRAGRTAPAEGLYLV
EVYY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgtgaagcttattattgaatatgacggtaccaattatcatggctggcaaaag
cagaagaatgcaaaaacggtgcaggatacaattgaaagggcgataaagggactcaccggg
gagaaggttgatcttataggtgcgagcagaactgactttggagtgcacgcattggggcag
gtggcaaatttcataaccaactccggcataccgggtgacaggttctcttatgccttaaac
agaatgcttcctgatgacatagtaataaaagaatcacaggaagtggacatggattttcat
gcaagatacaaagcaaagggaaaaagatacaggtatttgatttacaactcacagtttccg
tctgcgcttttaagacacaggacctatcatgtgtctcacaaactggattttgaaagtatg
caaagggcagcatcgtattttttggggacccatgatttttccgccttcagatcaagcggc
agcagtgcaaaaacgtctgtgaggacaattacggatgtttcgcttgaaagggaggacaaa
atagtaaagtttgagatagccggggacggatttttgtacaacatggtgagaataatagtc
ggaactttgatggaagtaggcattggaaagataagagccgatgagataccacagataatc
gaaagccgtaaaagaaaaagagcgggaaggacggccccggcggaagggttgtatctggtg
gaggtttattattga
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