Acetivibrio thermocellus DSM 1313: Clo1313_1089
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Entry
Clo1313_1089 CDS
T01933
Name
(GenBank) peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Pathway
ctx00550
Peptidoglycan biosynthesis
ctx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Clo1313_1089
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctx01002
]
Clo1313_1089
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ctx01011
]
Clo1313_1089
Enzymes [BR:
ctx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Clo1313_1089
Peptidases and inhibitors [BR:
ctx01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Clo1313_1089
Peptidoglycan biosynthesis and degradation proteins [BR:
ctx01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Clo1313_1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
DUF7038
Motif
Other DBs
NCBI-ProteinID:
ADU74153
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Position
1299354..1300601
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AA seq
415 aa
AA seq
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MYRRVLIQIQCFTVAMMILFFSQSPVFAVAEPPEIKAPSAILMEVQRGQILYQKNPKLKL
HVSCANKIMTGLIALEKMQNQLNTNITVSKKAVSVEGAVLNLEVGGKYPVEDLIYSVLLG
SANDSANVLAEYIGGDEKGFVELMNKKAQELEMKDTYFTNPTGLYDEKQYTTAYDLAVLI
RYALTKSSTFNEMFSAKARPWVDGTQILINSNELFWSYDGVDGGKTGYNEIDRQTAITTA
TRNGQRLICIVLDSPEESMYDDSVKLLDYGFLNFRTGILVSMGQPLKKVTVGDKVIDLVS
IGDYYYTYPAGENYIKNIEFKVPEKFDPPVLKSDVLGIAKYTLEDGTVIEVSLHPAVDVY
SSMGLFESLINQVKEYRDIVILLCILLVIELFIAVYHIVRLIKRLFLKLVYKPGK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaagagtcttgatacaaattcagtgctttacagtagcaatgatgattttgttt
ttctctcaaagtccggttttcgcagttgcggaacctccggaaatcaaggcaccttccgct
attttgatggaagtgcagaggggacagatactctatcaaaagaatccaaaattaaaactt
catgtttcgtgtgcaaataaaattatgaccggactcattgctttggaaaaaatgcagaat
caactgaacaccaatatcactgtcagcaagaaggcggtttctgttgaaggagctgtgtta
aatctcgaggtcggcggaaaatacccggttgaagatttgatatattcggttttgttagga
tccgccaatgacagtgccaatgttctggctgagtatataggtggagacgagaagggtttt
gttgagcttatgaataaaaaggcccaggaacttgagatgaaggatacttattttacaaat
cccacgggtctttatgatgaaaaacaatatacaacggcgtatgacctggccgttttaata
agatatgctctgacaaaatccagcactttcaatgagatgttttcggctaaggccagacca
tgggttgacggaacgcagattttaataaacagcaatgagttgttctggagctatgacggc
gttgacggtggaaagaccggatataacgaaatagaccgtcaaacggcaattaccactgcc
acaagaaacgggcaaaggttgatatgcatagttcttgattcaccggaagaaagcatgtat
gacgattcggtaaagcttctggactatggttttttaaatttcaggacaggcattctggta
tcaatgggacaacctttgaagaaagttaccgtcggcgataaagttatagatttggttagc
ataggtgactattactatacttaccctgccggggaaaattatataaagaatattgaattt
aaagttcctgaaaagtttgatcctcctgtactgaaaagtgatgttttaggcattgcaaag
tatactttggaggatggaacggttattgaagtaagtctgcatccggcggttgatgtttac
tcttcgatgggcttgtttgagtcgttgataaatcaagtgaaggaatacagggatatagta
atattgctgtgtattcttttggtaatagaattatttattgcggtttatcatatagtgagg
ctgataaagcggctgtttctaaagcttgtttacaagcctgggaaataa
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