Acetivibrio thermocellus DSM 1313: Clo1313_1106
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Entry
Clo1313_1106 CDS
T01933
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
ctx
Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ctx02044
]
Clo1313_1106
02035 Bacterial motility proteins [BR:
ctx02035
]
Clo1313_1106
Secretion system [BR:
ctx02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Clo1313_1106
Bacterial motility proteins [BR:
ctx02035
]
Pilus system
Pilus assembly proteins
Clo1313_1106
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
nSTAND3
AAA_16
AAA_29
AAA_14
AAA_5
DUF87
ATPase_2
AAA_30
AAA_23
AAA
ABC_tran
Viral_helicase1
AAA_7
Osmo_CC
Motif
Other DBs
NCBI-ProteinID:
ADU74170
LinkDB
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Position
1320711..1323074
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AA seq
787 aa
AA seq
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MLGVDTRGIDEILLEMGVLKIVDLKKAWDIQRESNKNIEDVLLELGLVSQKDIMHANAVK
MGIPFVDLSTYQISDSSVPLLITRNIANRYKVIPIEKENGVLTVAMSDPTDIFCIDDIRL
ATALEIKPVLADVKEIERLIVEYFGEEKKPQESKLKAENEEQNKKEELLKMEEELLGREI
YNNIKADVETREPEFDLASKGFDQNTYNESGIFKDKIGNILVRAGVITQDQLENALSIQK
KSGGLIGQILVKQGYIDRRSLYEFLQKQMGVEYVDIEGIEIDEDIIGLVSPNLAKTHKVI
PIEKVDGNLKVAMSDPMNIFSIDDLRLTTGLEIIPCLADEEQISAQLEKYYGKASRKTSA
KEIEQKVADLDEEIKKVNEKIAVEITQTEDEDTTIDISDLENAPIVKMVNIIFQKAVATR
ASDIHIEPQEDCVLIRFRIDGQLVEIMRYDRKILSSIVARIKIISGLNIAEKRIPQDGRI
GIKIDDREYDMRVSVLPTMFGEKVVIRIADKEGFNVSKKELGFFEDDLEKFDQIISSPYG
IILVTGPTGSGKSTTLYTALRELCKPNVNILTVEDPVESTIKGINQVQVNVKAGLTFATA
LRAFLRQDPDIIMVGEIRDSETAEIAIRAAITGHLVFSTLHTNDAASSVTRMIDMGIEPF
LLSSALVGLIAQRLVRRLCPHCKEAFQPDKNEREILGLKDDEEVTIYRAKGCDECNNTGY
KGRIAVYEILTVNREIKELISKNVSSDVIKDAAIKMGMKTLRMNCTRLVKEGITTIDEML
RIAYSID
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgctaggggtagatacaagaggtattgatgaaatacttttggaaatgggagttttaaaa
atagttgaccttaaaaaagcctgggatattcagagggaaagcaataagaacattgaggac
gtgctattggaactcggtcttgtatcccagaaagacataatgcatgccaatgccgtgaag
atgggtattcctttcgtcgatctgtcaacttatcaaatcagcgattccagtgttccttta
ttaattacacgaaacatagcaaaccggtacaaggttatacccatagaaaaggaaaatggt
gttttgacagttgcaatgagtgatccgacggatattttctgtatagatgacatacgtctt
gcaactgctttggaaataaagcctgtccttgcggatgtcaaggagatagaaagacttatt
gttgaatatttcggagaagaaaagaagccgcaggaatcgaaattaaaagcggaaaatgag
gagcagaacaagaaagaagaacttttaaaaatggaggaagaacttcttggaagagagata
tataataacataaaagccgatgttgagacgagagagccggaatttgatttggcaagcaag
ggatttgatcagaatacttacaacgaaagcggtatttttaaagataaaataggaaacatc
cttgtacgtgcgggagttattacacaggatcaactggaaaatgccctcagtatacagaaa
aaatctggcggacttatcggtcagattttagtaaagcaaggctatattgacagaaggtct
ctttatgaatttctccaaaaacagatgggagtcgaatacgttgatattgagggaattgaa
attgatgaggatatcattggtttggtatccccgaatttggcaaaaacccacaaggtaatc
cctattgaaaaagtggacgggaatttaaaggttgcgatgagcgacccgatgaacatattt
tcaattgacgatttgaggcttacaaccggccttgaaattattccttgccttgccgatgaa
gagcagatttcggcacagttggaaaaatactacggaaaagcttccaggaagaccagtgcg
aaagaaatagagcagaaggttgcggatcttgacgaggaaattaagaaagtaaatgaaaaa
attgcggttgaaataactcaaactgaagatgaagatacaacaattgacattagcgatctt
gaaaatgcccccattgtcaagatggttaatattatcttccagaaagccgtggctacaaga
gcaagtgatattcacatagaaccccaggaagattgtgttttaataagattcagaatagac
ggacaactggtagagataatgagatatgacagaaagattctttcttcaattgttgccaga
ataaaaatcatcagcggtctgaatattgcggaaaagagaattcctcaggacggaagaata
ggaataaaaattgacgacagggagtatgacatgcgtgtttccgttctgcctacaatgttc
ggagaaaaagttgttataagaattgccgacaaggaaggctttaatgtttcgaagaaagag
ttgggattctttgaagatgatttggagaaatttgaccagataatatcaagtccttacggt
attatactggttaccggacctaccggaagcggtaagtcaacaacgctttataccgcgctg
agagaattgtgcaagcctaatgtcaacatacttactgttgaggatcctgttgaaagtact
ataaagggtataaatcaggtacaggtgaatgtaaaagctggtttgacatttgctacggca
ctgagagcgttcttaagacaggaccccgacataataatggtgggagagatacgtgactcg
gaaacagctgaaatagcaatccgtgcagctatcacgggacaccttgttttcagtacattg
cacactaacgatgctgcaagttctgttacaagaatgattgacatgggaatagagccgttc
ctgttgtcttcggctctggttggattgattgcgcaaagacttgtaagaagactctgtcct
cattgcaaggaagctttccagccggataagaatgagagagagattcttggcttgaaagat
gatgaagaagttacaatatatcgtgcaaaagggtgcgacgaatgtaacaataccggttac
aaaggaagaatagcggtttatgagattctgacggtcaatagggaaataaaggaactgata
tccaagaacgtaagttccgatgtaataaaagatgcggctattaaaatgggcatgaaaaca
ttgagaatgaactgtacgaggttggttaaagaaggtattactacgatagatgagatgctt
cgtattgcatattccatagactag
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