Acetivibrio thermocellus DSM 1313: Clo1313_1204
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Entry
Clo1313_1204 CDS
T01933
Name
(GenBank) Peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Pathway
ctx00550
Peptidoglycan biosynthesis
ctx01100
Metabolic pathways
ctx01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Clo1313_1204
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Clo1313_1204
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ctx01011
]
Clo1313_1204
Enzymes [BR:
ctx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Clo1313_1204
Peptidoglycan biosynthesis and degradation proteins [BR:
ctx01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Clo1313_1204
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ADU74268
LinkDB
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Position
complement(1429288..1430943)
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AA seq
551 aa
AA seq
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MFIKRNKIILAVFTLSIILLFSRVIYIQFILGEKLFIQATAQKVSELTVDVPRGNILDRN
LIPLTNRKKKVDVVIQPLYLKDNSSDLQKISNILGLNFNEIKRQVEIKKEPIKITIDENK
KETLIKEKVQGISFIHSLERYDENTLAKHVLGYLNKIDIRGETGIEKAYDSYLKLNSKSS
VAVITDARDNPVKGLGYRFINSAKTGKMLNVKLTIDYNIQKTAEEVMDKYNLKGAVVIEE
VSSGDIVAMVSKPDFNPNEIEKYLDSPDNELFNRAVASYNLGSIFKIIDLACAYSKNINP
SMYYFCPGYVILGDKEFRCSAYGKGGHGLIDLHEAFASSCNPYFIELGIKIGPNNIIETA
NKFGFGKITGIDSQGVEESAGNLPKTGSFTYGDTANISIGQGDVLATPLQVADMVATIAN
GGIKNNVNIVDSIVDSKGNTVKVIRKDKGERIIEKEVCDKIKQLMEEVTVSGTGTRANLS
EYGGAGGKTGSAETGQFINGEKVVHAWFAGYFPRLDPKYSVAVFIEDGKSGGAIAAPVFE
EIAKTILKKGL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcaaacgaaataaaattattcttgcagttttcaccctatcaatcatactgctt
ttttcaagagtaatttacatacaatttattttaggagaaaagctttttatacaggcaaca
gctcaaaaagtatccgaacttaccgtcgatgtgccaagaggaaacatacttgacagaaat
cttattccccttaccaacagaaaaaagaaagtggatgtggtaatacaaccgctttacctt
aaggataacagcagcgatcttcagaagatatcaaacatattaggacttaatttcaatgaa
attaaaagacaggtcgaaataaaaaaagaacctataaaaatcactattgatgaaaataaa
aaagaaacacttataaaagaaaaagttcagggaatatcctttatacattcccttgaaaga
tatgatgaaaacacacttgccaagcatgttttaggttatctgaacaaaatcgacataaga
ggagaaacaggcattgaaaaagcttatgacagctatcttaaactaaactccaaaagcagt
gttgcagttataaccgacgccagggacaatcccgtaaaaggccttggctatcgatttata
aactcagctaaaaccggcaaaatgctcaatgtaaaactgaccattgattataacatacaa
aaaacggcggaggaagtcatggacaagtataatcttaaaggtgccgttgtaatagaagaa
gtcagttccggtgacattgttgccatggtaagcaagccggatttcaatcccaacgaaatc
gaaaaatatcttgacagccctgacaatgaattgtttaacagggccgtggcatcctacaat
cttggttccatattcaaaattatcgacctggcatgtgcctacagcaaaaacataaacccg
tcaatgtattatttttgcccgggatatgttattttgggagacaaagaattcagatgctcc
gcttacggaaaaggaggacatggattaatagacctgcatgaagcttttgcatcctcatgc
aatccatattttattgaactggggattaagattggtccaaataacataatagaaaccgca
aacaaatttggcttcgggaaaattaccggtattgactcccaaggcgttgaagaatcagcc
ggaaatcttccaaaaaccgggagttttacttacggagacacagccaatatttccataggc
cagggagacgtcctggcaactccccttcaggttgcggacatggttgccaccattgcaaac
ggtggaataaaaaataatgtaaacattgttgattccatagttgacagcaaaggaaacacc
gtcaaggttataaggaaggataaaggcgaaagaattattgaaaaagaagtgtgtgataaa
ataaagcagcttatggaggaagttacggtcagcggtaccggaaccagagcaaacttaagt
gaatacggcggtgccggcgggaaaacgggaagtgccgaaaccggtcaattcataaacggt
gaaaaagtggtgcatgcatggtttgccggctattttccccggctcgacccaaaatattcc
gtcgcagtatttattgaagacggaaaaagcggcggagcaatagctgcccctgtctttgag
gaaattgccaaaaccattttgaaaaagggactctaa
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