Acetivibrio thermocellus DSM 1313: Clo1313_1222
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Entry
Clo1313_1222 CDS
T01933
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
ctx
Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctx03021
]
Clo1313_1222
03009 Ribosome biogenesis [BR:
ctx03009
]
Clo1313_1222
Transcription machinery [BR:
ctx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Clo1313_1222
Ribosome biogenesis [BR:
ctx03009
]
Prokaryotic type
rRNA transcription factors
Clo1313_1222
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
KH_2
tRNA_anti-codon
RNA_pol_Rbc25
Motif
Other DBs
NCBI-ProteinID:
ADU74286
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Position
1450833..1452047
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AA seq
404 aa
AA seq
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MSADLIHALEQLEKEKGIDKDTLIEAIEAALISAYKRSFGSSQNVKVSIDRETGDFKVYA
LKKVTANPQNELLEISIENAKKINPDFEENDIVEIEVTPRKFGRIAAQTAKQVVVQRIRE
AERGIIYNEFSNKEGEIVTGVVQRIERKNVIIDLGKAEAILAPSEQIPGEEYKFNDRIKT
YIIEVKKTTKGPQILVSRTHPGIIKRLFELEVPEIYEGIVEIKSIAREPGSRTKIAVYSK
DENVDPVGACVGQKGTRVQAVVDELRGEKIDIIKWSSNPEEYISSSLSPAKVIRVDINEE
EKSAKVTVPDFQLSLAIGKEGQNARLAAKLTGWKIDIKSESQLRAAIEQQLLNFNGSYST
EKQDTPITPDQLFKTNVEESSNDTVDDNAENAADDVVEDTMDDV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggatttaattcatgcattggaacaattggaaaaagagaagggtattgacaag
gatacactgattgaggctattgaggctgctcttatttcagcttacaagagaagctttggc
tcatctcagaatgtcaaggtgtcgattgatcgtgagactggggattttaaggtttatgcc
ttaaaaaaggttactgccaatcctcaaaatgagttgttggaaatctctattgaaaatgcc
aaaaaaataaatccggactttgaagaaaatgatattgttgaaatagaggtaacaccaaga
aagtttggaaggattgccgctcagactgccaaacaggtggttgtgcagcgtatcagggaa
gcggaaagaggaattatttataacgagttctcgaataaagagggagaaattgttaccgga
gttgttcaaaggatagagagaaaaaacgtaattattgaccttggaaaagcggaggctata
ctggctccttccgaacaaataccgggagaggaatataagtttaatgacagaataaaaacg
tatataattgaagtgaaaaagaccaccaaagggcctcaaattttggtatcaaggacacat
cccggaattattaaaaggctgtttgaacttgaggtgcctgaaatatacgaaggaattgtt
gaaataaagagtattgccagagaaccgggttcgagaaccaagattgccgtttattcgaaa
gatgaaaatgtggacccggtgggagcatgtgtcggtcaaaaaggtaccagagtccaggcc
gttgttgatgaacttcggggtgaaaaaatagatataataaaatggagcagcaatcctgaa
gaatatatttccagcagccttagtcccgccaaggttataagggtggacataaatgaagaa
gaaaagagtgccaaggtcactgttcctgattttcagctttctctggcaataggcaaagag
ggacagaatgccagacttgctgcaaaactgaccggctggaaaattgatataaagagcgaa
tcacagcttcgggctgcaattgagcagcaacttttgaattttaacgggagctacagtact
gaaaagcaagatacgccaattacaccggatcaactttttaagacaaatgtcgaagaaagc
agcaatgatacggtggatgataatgctgaaaacgcagctgacgatgtggtggaagatacc
atggatgatgtataa
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