Acetivibrio thermocellus DSM 1313: Clo1313_1227
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Entry
Clo1313_1227 CDS
T01933
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Pathway
ctx00920
Sulfur metabolism
ctx01100
Metabolic pathways
ctx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Clo1313_1227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctx03400
]
Clo1313_1227
Enzymes [BR:
ctx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Clo1313_1227
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Clo1313_1227
DNA repair and recombination proteins [BR:
ctx03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Clo1313_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Cas_APE2256
Motif
Other DBs
NCBI-ProteinID:
ADU74291
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All DBs
Position
1456319..1457275
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AA seq
318 aa
AA seq
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MIENEIISLITKANKIAILPHVSADGDALGSSLALALALNTLNKKPIIYFEEDIPSIYGF
LPGREFVRIYDEKPDKYELVIALDTGDLQRLGKRVEIFNDADMTVNIDHHPTNTYFAQLN
LVNTNSAAVGEMIYRLLKKMEINLDRDMATCLYVAIATDTGGFRYGNTTTVTHQITADLI
NNGVDVSYISQTVFETVSLPKVKLMGKAIENLELFENGKLAVIKITDDLLRSVGAKEEDC
EGIVNIGRNIEGVEVAVAIRERPGGELKINFRSKNYVDVSAIANRHSGGGHKRAAGCTIK
GDINDVKEMLIKEISEVL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaatgagattatttctttaattaccaaagccaataaaattgctattttgcca
catgtttcagcggacggagatgctttgggctcaagtctggcgctggcattggcactaaat
acgttgaataaaaaaccaattatttactttgaagaagacataccttctatatacggtttt
ttgccgggccgggagtttgtaaggatatatgacgaaaaaccggataaatacgagcttgta
atagccttggataccggtgatttgcagcggctgggaaaaagggtggagatatttaacgat
gccgacatgaccgttaatatagaccaccaccctacaaatacgtattttgcccaattaaat
ttagtgaatacaaactcagcggcggtcggtgaaatgatataccggcttcttaaaaagatg
gagatcaacctggacagggatatggccacatgcctttatgttgcaatagctacagataca
ggtgggttcaggtacggcaatacaacgaccgttacccaccagataaccgctgatttgata
aacaacggcgtggatgtttcctatatatcccaaactgtatttgaaaccgtatccttgccc
aaggtgaagctgatggggaaagccattgaaaatcttgaactttttgaaaacgggaagctc
gcggtgataaaaattaccgacgacttgctaagaagtgtgggagcaaaagaagaggattgt
gaaggtatcgtcaatataggaagaaacatagaaggcgtggaagtagcagtggcaatcaga
gagcggccgggcggtgagcttaaaataaacttcagatcaaaaaattatgttgatgtttca
gctattgcaaacaggcattccggcggcgggcacaaaagagcggccggatgcacgataaaa
ggcgatataaatgatgtaaaagaaatgctcataaaggagattagtgaagtcttgtag
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