Acetivibrio thermocellus DSM 1313: Clo1313_1228
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Entry
Clo1313_1228 CDS
T01933
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctx03016
]
Clo1313_1228
Enzymes [BR:
ctx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Clo1313_1228
Transfer RNA biogenesis [BR:
ctx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clo1313_1228
Prokaryotic type
Clo1313_1228
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
4HB_MCP_1
Motif
Other DBs
NCBI-ProteinID:
ADU74292
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Position
1457279..1458172
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AA seq
297 aa
AA seq
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MNGILNVLKPPGMTSFDVVAYLRGILKIKKIGHTGTLDPGAAGVLPVCTGKATKAIEYLS
DKDKVYRAELLLGVSTDTQDSYGEVIREQEVKASVEDIEKVIKSFEGDYSQLPPMYSAVK
MNGKKLYELARSGIEVERTPRKVKIHFINILSIRGNRVVFDVGCSKGTYIRTLCSDVGDK
LGCGGHMGFLVRLKSGSFDIKNALTLEEIKETAEKGNPEEILTSIDKVFSDYDKIYLNEK
DKKRFLNGGFVTLGKYGKFALTQKVRVYDKDGAFLALGEAVLNKSEELSLKIDKLFV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaatattgaatgttttaaaaccaccgggtatgacttcctttgatgtggtggca
taccttaggggaatcctgaaaataaaaaaaatcggacacacaggcacgcttgaccccggt
gcggcaggtgtgcttcctgtttgtacaggcaaggctacaaaagcaattgaatatctttcg
gataaagacaaagtttacagagcggagcttttgctgggtgtatccactgatacccaggat
tcttatggagaagttataagagagcaggaagtaaaggcttccgttgaagatattgaaaag
gtaattaagtcttttgaaggggactacagtcagcttcctcccatgtattcggcagtcaag
atgaacgggaagaagctgtatgagcttgccagaagcggcattgaagtggaacggactcca
agaaaggttaaaatacattttattaatattttaagtatccgaggcaacagagttgttttt
gacgtgggatgttccaaaggcacttatataagaactttatgttccgatgtcggagacaaa
ttaggctgcggaggacatatgggttttctggtaaggctgaaatcgggaagttttgacatt
aaaaatgctttgactctggaagagataaaagaaacagccgagaaaggaaaccctgaagag
attctgacaagtattgataaagtttttagcgattatgataaaatttatcttaatgaaaag
gataaaaagagatttttgaacgggggatttgtaactctcggaaaatacggtaagtttgct
ttgacccaaaaagtcagagtatatgataaggacggtgcttttctggctttgggggaagcg
gttttgaacaaaagtgaagagttgagtcttaaaattgacaagctttttgtataa
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