Acetivibrio thermocellus DSM 1313: Clo1313_1273
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Entry
Clo1313_1273 CDS
T01933
Name
(GenBank) Rad50 zinc hook domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ctx
Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctx03400
]
Clo1313_1273
DNA repair and recombination proteins [BR:
ctx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clo1313_1273
Archaeal homologous recombinant proteins
Clo1313_1273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_27
Rad50_zn_hook
AAA_29
Fzo_mitofusin
AAA_21
Laminin_II
SesA
Filo_VP35
ZNF380_CC
MobC_2
Motif
Other DBs
NCBI-ProteinID:
ADU74336
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Position
1506515..1507966
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AA seq
483 aa
AA seq
DB search
MITIKRIRIENFQSHKDTELSFSDGLNVIVGPSDQGKSAIIRAIKWVLYNEPRGTDFIRQ
GTNSARVTLELSNGYVITRERAPNKNRYTLKDPDGNVSVFEGFGNEVPLEIVKAHGIPKV
ALDMDVRASLNIGEQLEGPFLLSESGATRAKAIGRLTGLHIIDQAIKDCATDIRRENQTC
DRIEREIEDIDKKLEEYKNIEELGRRLEESEKVIARMEALTAKVDMLEEKKNSLKDIETE
YLAQTKILSRLDRLEECGVYLKSAEACFFKLNQILGIKKRYSEVLTGMEEMEKVLQKTSF
VDEAVEILKKASDIFSKYEKLDRLRSEFSNVGREVNQTKNILDRTSNVKELDFMIKNISD
KVLLGSEITQLREKLVCLEREISRVKKNISSYENINLVQEIVTSVDKKLEVLNKLEAAKK
EYSAVCTSLNDGLEFMDKNKKEIQENLNIYIDILRKSGVCPLCKSSIGDEKLENIIRHYE
EVH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgattacgataaaaaggataagaattgaaaatttccagtcacacaaggatacggaactt
tctttttccgacgggctcaatgtcatcgtgggaccgtcggaccagggtaagtctgccatt
atccgggctattaaatgggtattgtataatgaacccagagggactgattttataaggcag
ggaacaaattctgcaagggttactttggagcttagcaacggatatgtcataacaagggaa
agggcacctaacaaaaacagatatacgctcaaagaccctgacggaaatgtcagtgtgttt
gaagggttcggaaatgaagtgcctctggaaattgtaaaggctcatgggattccaaaagtg
gctttggacatggatgtccgtgcaagtctcaacataggagagcagcttgaaggaccgttt
cttttgtcggaatccggtgccacccgggcaaaagccattgggagacttaccggacttcat
atcattgaccaggcgataaaggattgtgccacggatataagaagggaaaaccagacttgt
gacaggattgaaagagaaattgaagatattgacaaaaaacttgaagagtataaaaatata
gaagaattgggaagaagactcgaagagtccgagaaagtaatcgcccggatggaagctttg
acggcaaaagttgatatgcttgaggaaaagaagaattccctcaaagacattgagactgaa
tatttggctcaaaccaaaattctttcaaggcttgacaggctggaagagtgcggtgtgtat
ttaaaaagtgcggaagcctgctttttcaagctaaatcagatactgggaataaaaaagagg
tattcagaggttttaaccggaatggaagaaatggaaaaggtattgcaaaaaacaagcttt
gtggatgaggcagtggagattttgaaaaaggcatctgatattttctcaaaatatgaaaaa
cttgacagattgcgttcggagtttagtaatgttggcagggaagttaaccagacaaaaaat
atcctggacaggacgtcaaatgtgaaagaacttgattttatgataaaaaatatttctgac
aaggttttgcttggctctgaaattactcagttgcgggaaaagcttgtttgccttgaacga
gagatatccagggtcaaaaagaacatatcctcttacgaaaatataaatttagtgcaggag
attgtgacttctgttgataaaaagctggaagtgttaaacaaactggaagcagccaaaaag
gagtacagtgctgtttgtaccagtctgaatgacggtttggagtttatggacaaaaataaa
aaagaaatacaggagaatcttaacatatatatcgatattcttagaaaaagcggagtgtgt
ccgctttgcaagagcagtatcggagatgaaaagcttgaaaacataataaggcattatgag
gaggtacactga
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