Acetivibrio thermocellus DSM 1313: Clo1313_1334
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Entry
Clo1313_1334 CDS
T01933
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Pathway
ctx03030
DNA replication
ctx03410
Base excision repair
ctx03420
Nucleotide excision repair
ctx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Clo1313_1334
03410 Base excision repair
Clo1313_1334
03420 Nucleotide excision repair
Clo1313_1334
03440 Homologous recombination
Clo1313_1334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctx03032
]
Clo1313_1334
03400 DNA repair and recombination proteins [BR:
ctx03400
]
Clo1313_1334
Enzymes [BR:
ctx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Clo1313_1334
DNA replication proteins [BR:
ctx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Clo1313_1334
DNA repair and recombination proteins [BR:
ctx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Clo1313_1334
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clo1313_1334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
XPG_I
Motif
Other DBs
NCBI-ProteinID:
ADU74397
LinkDB
All DBs
Position
1577578..1580262
Genome browser
AA seq
894 aa
AA seq
DB search
MSKQKLMAIDGNSILNRAFYGLPELLTTSDGIYTNGIYVFLNIMHKFIEEENPEYICVAF
DLKAPTFRHNKYEGYKANRKGMPEELRVQVPLLKEVLDAMNIKRLEMEGFEADDILGSVS
LCAEKKGLEVILVTGDRDAFQLIGPSTRLKLPRTRGGKTEVEEYDYNKIVEVYGIKPEQF
VDVKALAGDTSDNIPGVPGIGEKTALALIKEYNNLENLYNSLDSIKKKGLREKLETFKEQ
AFLSRELALIERNMPSLCDIEELKRVEIDREKTYEIFKRLEFRSFIDKFGLNDVQIQNTV
ELNVKIAKNASELESLKNNILKSRKVCIYHLIDKTGSFSQKLAAIAISPVEDEAWYLDFT
NNIDEDEFFRQFKDVLEDGNIKKYGHDLKNFIVYLNNRGIDFNGLAFDTMIGAYIINPSK
ETYTISELAQEYLNLSVKAVEELAGKGKSFTLFKDMQPDVLSKTVGVYPHVISKVSRKID
SLLKENNQERLYYDIELPLVRTLADMEYYGFKVNVDALVEFSKELQEKIDVVTKEIYTLA
GEEFNINSPKQLGVILFEKLGLPIIKKTKTGYSTDAEVLEELSDRHEIVEKILEYRQLVK
LKSTYAEGLLAVINPYTGKIHSSFNQTVTATGRISSTEPNLQNIPIKLEMGRKIRKVFIP
SDENYLLLDADYSQIELRVLAHITNDENMINAFLNNEDIHTSTAASVFGIPKEEVTPLMR
SRAKAVNFGIVYGIGDFSLAKDLKISRKEARAYIDGYLDRYPNVKKYMHDIVEEGKEKGF
VTTMFMRRRYLPELKSRNFNIRSFGERVAMNTPIQGSAADIIKIAMVKVHGELKKRKLKS
RLILQVHDELIVETFKDEKEEVEKILLEGMQNAVSLKVPLVVEIKSGSNWYETK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaaaaattgatggccatagacggaaacagtattcttaacagggctttttac
gggcttcccgaacttctgacaacatccgacgggatatataccaacggaatttatgttttt
ttaaatataatgcataaatttattgaagaggaaaatcccgagtacatttgcgttgcgttc
gaccttaaggctccgactttcaggcacaataaatacgaaggttacaaggcaaacaggaaa
ggaatgccggaagagctccgggttcaggttcccctgcttaaggaagttttggatgcaatg
aatataaaaagacttgagatggaggggttcgaggctgacgacatacttggttccgtttcc
ttgtgcgccgaaaaaaagggtctggaagtaatactggttacaggggacagggatgctttt
caattgatcggtccttccacaaggctgaaacttccgcggacgagaggcgggaaaacagag
gttgaggaatatgactacaacaagattgtggaggtctacggaatcaagccggaacagttt
gttgacgtcaaggctttggcgggagatacttccgacaatattcccggtgttccgggtatc
ggcgaaaagacggccctggctctcataaaagaatacaacaatcttgaaaacctttataat
tcattggacagcattaaaaagaaaggacttagggaaaagcttgaaacttttaaggagcag
gcttttctgagcagggagcttgccctgattgaaagaaacatgccgtccctttgtgatatt
gaagagctgaaaagagtggagattgacagggaaaaaacctatgagatatttaagaggctg
gaatttagaagctttattgacaagtttggattgaacgatgtccaaatccaaaataccgtg
gaactgaatgtgaaaatcgcaaaaaacgccagtgaacttgagagtttgaaaaacaatatt
ctcaagtccagaaaagtttgtatttatcatttgattgacaaaacgggcagcttttctcaa
aagcttgccgccattgcaatttcgcccgtggaggatgaagcatggtatttggattttacc
aataatattgatgaagatgagtttttcaggcagtttaaggacgttttggaggatggaaat
ataaagaaatacgggcatgatttgaaaaattttatagtatatttaaataatcggggaatt
gattttaacggtttggcttttgacacaatgattggagcttatataataaacccgtcaaag
gagacctatacgatatccgagctggcacaggagtatttaaacttgagtgtaaaggcggtt
gaggaacttgcgggcaagggcaaaagctttactttgtttaaggacatgcagcctgacgtt
ctttcaaagactgttggtgtttatcctcatgttataagcaaagtaagccggaaaattgac
agccttcttaaagaaaacaaccaggagaggctttattatgacattgagcttccgctggtg
cggaccttggcggatatggagtattacggattcaaggttaatgtcgatgctcttgtggaa
ttttcgaaagagcttcaggaaaagatagatgttgtaacaaaagaaatatacactttggcg
ggagaagagttcaatatcaattctccgaaacagctgggagttattttgtttgagaaactg
ggtcttcccattattaagaaaacaaaaaccggatattcaaccgatgctgaagtattggaa
gagctttccgacaggcatgaaatagtggaaaaaatactggaatacagacagcttgtaaag
ctgaaatccacttatgcggaaggccttttggcggttataaatccttacacgggaaagatt
cattcaagtttcaaccagacagtgacggctacgggaagaataagcagtacagagccaaat
cttcagaatataccgataaaacttgaaatgggcaggaaaatacgaaaagtttttatacct
tcggatgaaaactatctgcttcttgatgcggactattcccagatagagcttcgggttctg
gcccacataaccaatgacgaaaacatgataaatgcgtttttaaacaacgaagacattcat
acttccacggctgcatcggtctttggaataccaaaagaggaagttacccctctcatgagg
tccagagcgaaagctgtcaatttcggtattgtatacggtataggggacttcagtcttgca
aaggatcttaagataagcagaaaggaagccagagcatatatagacggttatctggacaga
tatccaaatgtaaagaaatatatgcatgatattgtggaagagggaaaagaaaaaggtttt
gtaaccaccatgttcatgagaagaaggtaccttcctgagcttaaatcgcgcaacttcaac
atacggtcttttggagaacgggttgcgatgaacaccccgatacagggaagtgccgcggat
ataatcaagattgccatggtaaaggtgcatggagagcttaaaaaaagaaagcttaaatcc
aggctgatacttcaggttcacgatgaacttattgtagagacgttcaaggatgaaaaagaa
gaggtggaaaagattttacttgaaggcatgcaaaatgccgtaagtctgaaagtgccgctg
gttgtggagattaaatcgggcagcaactggtatgagacaaagtaa
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