KEGG   Acetivibrio thermocellus DSM 1313: Clo1313_1645
Entry
Clo1313_1645      CDS       T01933                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ctx  Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:ctx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctx03400]
    Clo1313_1645
Enzymes [BR:ctx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Clo1313_1645
    5.6.2.6  RNA 3'-5' helicase
     Clo1313_1645
DNA repair and recombination proteins [BR:ctx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Clo1313_1645
SSDB
Motif
Pfam: DEAD Helicase_C WHD_Lhr Cas3-like_C_2
Other DBs
NCBI-ProteinID: ADU74703
LinkDB
Position
complement(1919053..1921191)
AA seq 712 aa
MSQIFYKLSDKVQKKIWDIGWKHFTPIQEKAIPVIIDTEKDVVLSSGTASGKTEAAFLPI
ISKIHETASNVLKVLYVSPLKALINNQFERLQKLCEEMNIPVHRWHGDVSQHSKKKLINN
PAGILQITPESIESLFINRTQFLKQLFQELEFIVIDELHAFIDTERGVQLRSLLSRIKQY
TKRCPRIIGLSATIDNFSLIKKWINCNNPDNVEIIEVKGFERDIYYSLMHFEKSKTGNYP
LELYEDILELTRNYTSLIFFNSRAAVEEATVILNRLAQREKLGERYFAHHSSIAKAEREF
VEKLMSESTGIKSVIATSSLELGIDIGEIDLVIQVDSTFTVSSLKQRLGRSGRKQGEGQY
LQMYTTDKYGLLQSIAVMDLLLQGWTEPCKGYPYPYDILFHQIISICHQLNGIPLEKLVS
LVSENAAFYELPESDIRMLVEHMIGKEYLEILAGTQELIVGLEGERLLRQKDFYSVFMTP
EVYEVFYGTKNIGEIEKTFLLNEGDNIILAGRLWKIEEIDFHRNKVYVKKAMDGKPPRYS
GGLAPLHPRIPERMHEILCLDCKFDFIDDRAQTALEELKVPYKYFNVKPDERIIWQTKEK
LLFETFTGTNIFRTLIWMLRYYGVDEVKTDGIGRMEIPLNDEFIDILQDIKSRKWSLRSL
LPYTKEEEFFVSKYSDFLPSELQIKMHGAYNVDIEGVLKFLDKFRIRIISLE
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgagccaaatattttataagctatcagataaagtacaaaagaaaatatgggacattgga
tggaaacattttactcctattcaagaaaaagcaattcctgtgattatagatacagaaaaa
gatgtggttttatcttcgggcacagcttcaggaaaaaccgaggctgcttttttgccaatc
ataagcaaaattcacgagacagcttctaacgttctgaaagttctttatgtttctcctcta
aaggctttgattaataatcaatttgaacgacttcagaaattgtgtgaagagatgaatatt
cctgttcataggtggcatggagacgtgagccagcacagtaagaaaaaattgattaataat
cccgctggcatattgcagattactcccgaatccattgagagcttgttcataaacagaaca
caatttttaaaacaattattccaggaacttgaatttatcgtaatagacgaactccacgct
tttattgatacagaaagaggagtccaacttcgctccctcttatctcggattaaacaatat
actaagaggtgccctaggattattggattatcagcaacaatcgataacttttctctgatt
aaaaagtggattaactgcaacaatccagataatgtggagattattgaagtgaaggggttt
gagagggatatctattatagtttgatgcattttgaaaaaagtaaaacaggaaattatcct
cttgaattatatgaagatattctagaattgacccgaaattatacctctttgatttttttt
aatagtcgggcggcagtagaggaggccacagtaattttgaatcgattagctcaaagggag
aaactgggagaaaggtattttgcccatcattcttcaatagctaaggcagaacgggaattt
gtggagaagctgatgtcagaatctacggggattaaaagcgttatagcaacaagctcatta
gaactaggcatcgatataggggaaatcgatttggtaatacaggtagacagtacatttaca
gtttcctctttaaagcagagattgggtaggtcagggagaaagcaaggagagggtcagtat
ttacaaatgtataccacagacaaatatggattactacaatctattgcagtaatggatctc
ttgttgcaaggctggactgaaccctgcaaaggttatccatacccatatgatattttattt
catcaaattatttctatatgccaccaactgaatggtattcctcttgagaaacttgtttca
ttagtaagtgaaaatgctgcattttatgaactgccagaatcagatatccgtatgttggtt
gagcacatgatcggtaaggaatatttagaaatattggccggtacacaagaattaattgta
ggattagaaggggaacgattactgagacaaaaagatttttactccgtctttatgactccc
gaagtctatgaagtcttttacggaactaaaaatataggggaaatagaaaaaacttttctt
ttaaacgaaggagacaatattattttggctggacgattgtggaaaatagaagaaatagac
tttcatagaaataaagtatatgtaaaaaaagcgatggatggaaagcctccaagatattca
ggtggactagcaccattgcacccccgtattccagagcgcatgcacgaaatattgtgctta
gattgtaagtttgattttattgatgatagggctcagactgctttagaagaattaaaggtg
ccttataagtattttaacgttaagccagacgaaaggattatctggcaaacgaaagagaag
ttactttttgaaacttttactggcacaaatatctttagaactttgatatggatgttgcgt
tattatggagttgacgaagtgaaaacagacggaattggacgtatggagatcccacttaat
gatgaattcattgatattttacaggatattaagagtagaaaatggtctttaagaagttta
ttgccctatactaaagaagaggaatttttcgtctccaagtatagcgattttcttccttcg
gaattgcaaataaaaatgcacggagcttataatgtagatatcgaaggggtattgaaattt
ttagataaatttcgtattagaataataagcttggaataa

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