Acetivibrio thermocellus DSM 1313: Clo1313_1921
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Entry
Clo1313_1921 CDS
T01933
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctx03032
]
Clo1313_1921
03400 DNA repair and recombination proteins [BR:
ctx03400
]
Clo1313_1921
Enzymes [BR:
ctx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Clo1313_1921
DNA replication proteins [BR:
ctx03032
]
Prokaryotic type
DNA Topoisomerases
Clo1313_1921
DNA repair and recombination proteins [BR:
ctx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clo1313_1921
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADU74971
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Position
complement(2247332..2249515)
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AA seq
727 aa
AA seq
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MSTNNLIEQRIVDTLEKNYMPYAMSVIVSRAIPEIDGLKPSHRKLLYTMYKMGLLTGEKT
KSANVVGQTMKLNPHGDMAIYETLVRLTRGNGALLLPYVDSKGNFGKHYSRDMKYAAPRY
TEVKLDKICEELFKDIDKDTVDFVDNYDGTMKEPKLLPATFPTILVNANHGIAVGMASSI
CSFNLVEVCNAAVEFIKDENTDLVGILKAPDFPTGGQLIYNEREMREIYEKGRGTFKLRA
KYRYDKANSCIEIYEIPYTTTVEAIIDSIADLVKSNKIRDISDVRDETDLNGLKIALDIK
RNADPDTLMNKLYKLTPLEDSFSCNFNILINGRPMVMGVRGILKEWVNFRMDCIKRQTLY
DIDKKTQKLHILLGLEKILLDIDKAIKIIRNTEEEAMVVPNLMEGFGIDQAQAEFVAEIK
LRNLNKEYILKRVSEIESLKKEIAELNELYGSEKKIKKLIIKQLEEIAKKYGQPRRTEIV
MEEHIEEITHEHLIEDYNLKLFLTKQNYLKKIPLTSLRTSPEHKLKEGDFIVQELETHNK
ADLLLFSNRQNVYKMKIYEIEDCKASSLGEFLSNVLSLEEGEEIIHMVATDDYKGYMIFG
FENGKVAKIVLESYATKTNRKKLANAYNGLSRLVYIGHILEDEELVAFSSLNKVLIFNTS
NINPKTTRDSQGVQVLKSKKGSVMTHIKKISEVSFTDPDYYRTKNIPAIGCYLKDEDVED
NQIKLEL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaacaatttaattgaacagagaatagttgacactcttgaaaaaaactatatg
ccctatgcgatgagcgtaattgtttcgagggcaataccggagatagacgggcttaagccg
tcccacagaaagctgctttatacaatgtataaaatggggttgctcaccggcgaaaaaacc
aagtcggcaaatgtggttggccaaaccatgaaacttaatcctcatggcgatatggcaatt
tatgagactcttgtgaggctgactcgcggcaacggtgctctgttgcttccgtacgtggat
tcgaaaggcaactttggaaagcattactcaagagacatgaaatatgctgcaccgcgttat
actgaagtgaagcttgacaaaatatgtgaagagctttttaaagatattgacaaggatacg
gtggactttgttgacaactacgatggaacgatgaaggagccaaagcttcttcccgccact
tttcccaccattttggtaaatgccaaccatggaattgcggtgggaatggcaagcagtata
tgcagttttaaccttgtagaggtatgcaatgccgctgtcgagtttataaaagatgagaac
acggatcttgtcggaatcctaaaagcccctgattttcccacgggaggacagcttatatat
aatgaacgggaaatgagggagatttacgaaaaaggcagaggaactttcaaacttcgggca
aaatacaggtatgacaaagcgaacagctgcatagaaatatatgaaataccttatactacc
acggttgaagctattatagactctattgcggaccttgtaaaaagcaataaaattcgggac
atatccgatgtcagggacgagacggatctgaacggccttaagatagcactggatataaaa
agaaatgcagaccctgacactctcatgaacaaactttacaaactcactcctcttgaggac
agtttcagctgcaacttcaacatactgattaacggtcgtcccatggtgatgggagtaaga
ggtattcttaaagaatgggttaatttcagaatggactgcatcaagaggcagaccctttat
gatatagacaagaaaacccaaaaacttcatattcttcttggcttggagaagattttactg
gacattgacaaagccattaaaattataaggaacactgaggaagaagcaatggtggttccg
aaccttatggaaggttttggaatagatcaggctcaggctgagtttgtggctgagataaag
cttagaaacctcaacaaagaatatattttaaaaagagtgagcgagattgaaagtttgaaa
aaggaaattgcggagcttaatgaattatacggcagcgagaagaaaataaaaaagcttatc
ataaagcaactggaggagattgcgaagaaatacggacagcccagacgtactgagattgtt
atggaggagcatattgaagagataactcatgaacatttgatagaggactacaatttgaag
ctgttcctcacaaaacagaactatttgaagaagattcctctgacttcattgagaaccagc
cccgaacacaagctcaaagagggagactttatagtgcaggagctggagactcacaacaaa
gcggatcttctgttgttttcaaacaggcaaaatgtatataaaatgaagatatatgaaatt
gaagactgtaaagcaagcagccttggggaatttctttcaaatgttttaagccttgaagag
ggtgaagagattattcatatggttgcgacggacgactacaaaggatatatgatatttggc
tttgagaacggcaaggtggcaaagatagtgcttgaaagctatgcaaccaaaaccaacaga
aagaagcttgccaatgcatataacggtttgtcaaggctggtttatatcggacatattttg
gaggatgaagaactggttgcctttagcagtttgaacaaagttcttattttcaatacttca
aatataaatccaaaaacaacgagagattcccagggagttcaggttttaaaatcgaaaaaa
ggcagtgtaatgacccatataaagaaaatcagcgaggtttcctttacagaccctgactat
tacaggacaaagaatattcctgccataggttgctatcttaaagatgaagatgttgaagac
aaccaaataaaacttgaactgtaa
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