Acetivibrio thermocellus DSM 1313: Clo1313_2051
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Entry
Clo1313_2051 CDS
T01933
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Pathway
ctx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clo1313_2051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctx03400
]
Clo1313_2051
Enzymes [BR:
ctx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clo1313_2051
DNA repair and recombination proteins [BR:
ctx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clo1313_2051
RecFOR pathway proteins
Clo1313_2051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
nSTAND3
TsaE
NTPase_1
ResIII
AAA_22
NB-ARC
AAA_3
AAA_14
RNA_helicase
AAA_24
AAA_18
DUF815
Bac_DnaA
IstB_IS21
Sigma54_activ_2
Rad17
AAA_17
AAA_2
NACHT
AAA_PrkA
AAA_28
NPHP3_N
AAA_25
AAA_11
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ADU75092
LinkDB
All DBs
Position
complement(2421395..2422387)
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AA seq
330 aa
AA seq
DB search
MEDRLVGCRLSEEDVDEVSLRPRKFGEYIGQTKVKENLMVFIEAAKKRNEALDHVLLYGP
PGLGKTTLAGIIASELGVNLRITSGPAIEKPGDLAAILTNLGNFDVLFIDEIHRLNRSVE
EILYPAMEDYALDIIIGKGPSARSIRLDLPKFTLIGATTRAGLLTSPLRDRFGVINKLEL
YSVEELGQIVKRSARILNVGIEDEAAEEIARRARGTPRVANRILKRIRDFAQVKSDGFIT
KEIARTGLEALEVDEIGLDAVDRNLLMSIIEKFGGGPVGLDTLAATIGEEPDTIEDVYEP
YLLQLGFINKTPRGRMATKLAYEHFGLKYE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaggcttgtcggttgcaggcttagtgaagaagatgttgatgaggtaagtttg
agacccagaaagttcggagaatatatcggtcagacaaaggtcaaagagaaccttatggtt
tttattgaggctgcaaagaagagaaatgaagcattggatcatgtgcttctttatggacct
cccggactggggaaaacgacccttgccggaataatagcatccgagttgggagttaatttg
cgtattacttccggtccggccatagaaaagccgggagatttggctgccatacttaccaat
ctcggcaatttcgatgtcctttttatagatgagattcacaggctgaacaggagtgtcgag
gaaatattgtatcctgccatggaggattatgctttggatataattatcggaaaaggcccc
agtgccaggtcaatcaggcttgaccttccgaaattcaccctgataggtgccaccaccagg
gcagggcttctgacatctcccttaagggacagatttggagtaataaacaagctggaattg
tatagtgtggaagaacttggacagattgtgaagagatctgccaggattttaaatgtcggc
attgaagatgaggcggccgaagagatagccaggcgcgccagaggtacgccaagggttgcc
aacaggatattaaaaagaattagggattttgcccaggtaaaatccgacgggtttataaca
aaagagattgccagaacagggcttgaggctttggaagttgatgaaatcggtcttgacgcg
gtggacagaaatcttcttatgagtattattgagaaatttggaggcgggccggtgggactt
gacacactggcggccacaataggagaagagccggatacgatagaggatgtatatgaacct
tatcttttacagcttggatttataaacaagactccccggggaagaatggctacaaaactt
gcctatgagcatttcgggcttaaatatgaataa
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