Acetivibrio thermocellus DSM 1313: Clo1313_2694
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Entry
Clo1313_2694 CDS
T01933
Name
(GenBank) recombination helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ctx
Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:
ctx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctx03400
]
Clo1313_2694
Enzymes [BR:
ctx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clo1313_2694
DNA repair and recombination proteins [BR:
ctx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Clo1313_2694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
DEAD
AAA_11
AAA_12
AAA_30
AAA_16
AAA_22
DUF4145
Motif
Other DBs
NCBI-ProteinID:
ADU75681
LinkDB
All DBs
Position
complement(3166281..3170036)
Genome browser
AA seq
1251 aa
AA seq
DB search
MSERTKWTDEQWEAITGNEKSLLVSAAAGAGKTAVLVERIIRKITDEENPVDIDRLLVVT
FTNAAATEMRERIAQAISEKLEENPGSANIQRQLTLLGKACITTIHSFCLEVIRSNFQQI
NIDPGFRIADETESRLMKLEALDEVFEEQYENENEDFFELLECYGGNRDDRALQDMVLNL
YDFIQSSPWPEEWLEKMTESMNIPDGTDFGKTLWGSVLLSSVKIELEGLKEMISRALEIL
KDASGLEKYRAVYMEDLANVDALLKLLNEESEMQWDRIFNALQGFEFATLPRCGREVDKD
KQEIVKKIRDDVKQRIRKFREKVITSVSNEIISDLKALYPKMKCLANLVKQLAEKYAEKK
NRKSVVDFNDLEHFCLEILTERKEDGSIIPSRTAISYRERFAEILVDEYQDSNLVQETII
NMISKGDDASPGVFMVGDVKQSIYRFRQARPELFLEKYNTYLPDKGSPCRKIILSRNFRS
RREVIDAVNFLFKQIMSTGAGELDYTDAEALNFGAVFDENAKEDITVGGEVEFHLIQTED
EDKNFTFENEGEEGRQADEGEEDEEMLDSIQCEARLVGRRILELMKPDENGRYFSVFDKA
KNEYRRVEYRDVVILLRTTRNWAEVFVDELSVMGIPVFADTGTGFFKTVEVQVMLSLLQI
IDNPLQDIPLLSVLRSPIVGFTTDELAELRLVDKKALLFDALKKLAESGQGEAAGKASAF
LENLQKWREMSLYMSTDRLLWQLYNDTGYYSIVGAMPAGEQRQANLRILYERARQFEETS
YKGLFNFINFIDKLKSSRGDMGSAKILSENDNVVRIMSIHKSKGLEFPVVIVAGCGKKFN
LQDMNKSILLHHELGFGPDVVDHKLRLSWPSVAKQAIREKIKAETLSEEMRILYVALTRA
REKLVITGAVKNARKAVEKWLDSASVQESRLSAYDMLSGANYLDWIGPALLRHKNCGGLR
DCVGSAGFRGLLIDDPSVWSVKIWNKTDVQSSGVSEEQGESEFIKWLDSLEKEEPSEYAE
ETARRLSWSYPYVKASKVPAKVSVTELKRRYNEMVSEDVMQFPDYMPVLVKKPMFLEEKK
GLTYAEKGTILHFVMQHLDYGREDIEAQIEEMVAKNLLTPQQAQSVDAARIRRFLNSPLG
KRMLASKSINREVPFNIEIPCHELYRDMEDEACHGETLLLQGVVDCYFEEPDGIVLVDYK
TDYVAPGNVETIRERYKVQILYYARALEMLTGKKVKEKYIYLFWDGRILGF
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaggactaaatggacggatgaacaatgggaggccataaccgggaatgaaaag
agtcttttggtttcagcggcggcaggagcgggaaaaacagcggtactggtggaaagaatc
atccgaaaaatcaccgacgaagaaaatcccgtggacattgacaggctgctggtggttacc
tttaccaatgctgccgccaccgaaatgagggaaagaattgcccaggccatttccgaaaaa
ttggaggagaatcccggctcggccaatattcaaagacaacttacactgctgggaaaagca
tgtattaccaccattcactctttttgccttgaggtgatacgcagcaatttccagcagatt
aacatagatccgggttttcgtattgccgatgaaaccgaaagccggcttatgaaactggaa
gctttggatgaagtgtttgaagaacagtatgagaatgaaaacgaagatttttttgaactt
ctggaatgctacggtggcaacagggatgacagggcacttcaggatatggtgctgaatctg
tacgattttatccagagcagtccgtggccggaagaatggctggaaaaaatgacggagagc
atgaacattcccgatggaacggattttggaaagactctttggggcagtgtgcttttaagc
tctgtgaagattgaacttgaaggcttgaaagaaatgatatcccgtgcgctggagatattg
aaggatgcttcagggctggagaaataccgggctgtatatatggaggacctcgccaatgtt
gatgcgctgctcaagcttttaaatgaagaaagcgaaatgcagtgggacaggatttttaac
gcgctccagggctttgagtttgcaacgctgccccgctgcggcagagaggttgacaaggat
aagcaggaaattgtaaagaaaatccgggatgatgtaaagcaaaggataagaaagtttcgg
gaaaaggtaattacgtctgtttccaatgaaattataagcgatttaaaagccttgtatcca
aaaatgaaatgcctggcaaacttggtaaagcagcttgcggaaaagtatgcggaaaagaaa
aaccgcaaatctgtagtggattttaacgacctggagcatttttgtctggagattcttaca
gaaagaaaggaagacggaagcataataccttccagaaccgccatttcatacagggaacgg
tttgcggagattttggtggacgagtaccaggacagcaatctggtgcaggagaccattatc
aatatgatatccaaaggggatgacgcaagtcccggtgtatttatggtgggagatgttaag
cagagtatttaccgtttcaggcaggcaaggcccgagttgtttcttgaaaagtacaacacc
tatttgccggataagggcagtccctgccgcaaaataatactctccaggaatttcagaagc
cgcagggaagtgattgacgctgtcaatttcctgttcaaacagattatgtcaacaggcgcc
ggggaactggattacactgatgccgaggctttgaatttcggagcggtttttgatgaaaac
gccaaggaagatataacggtcggtggagaagttgagttccatctgattcagacggaggac
gaagataaaaattttacgtttgaaaatgaaggtgaggaagggcggcaggccgacgaagga
gaagaggatgaggaaatgctggacagcatccagtgtgaagcaaggctggtgggccgaaga
atccttgaactgatgaaaccggatgaaaatgggcggtattttagtgtttttgacaaggca
aaaaacgagtaccgcagggttgaataccgggacgttgtaatacttctcagaaccacaagg
aactgggcggaggtttttgttgatgaactgtccgtgatgggaataccggtttttgccgat
accggaaccggattttttaaaacagtggaagtccaggtaatgctgtcccttttgcagatt
attgacaatcctttgcaggacattcctttgctttcggtgctgcgttcgccgattgtcggc
tttaccaccgatgagcttgcggaattgaggcttgttgacaaaaaagcgcttctgtttgat
gcattaaaaaagctggcggaaagcgggcagggagaagcggcagggaaagcttcggcattt
cttgaaaaccttcagaaatggagggaaatgtcgctgtacatgtccactgaccggttgttg
tggcagctttacaatgataccggttattacagcattgtcggagcaatgcctgcaggggag
cagcggcaggcaaaccttagaatattgtatgagcgggcccggcagtttgaggagaccagc
tataaaggattattcaattttataaactttatagacaaattaaaaagcagcaggggcgac
atgggaagcgcaaaaattttgagtgaaaatgacaatgtggtgcgcataatgagcattcac
aagagcaagggactggagtttccggtggtgattgttgctgggtgtggaaagaagttcaac
cttcaggatatgaacaagagcattcttctgcaccatgaacttggtttcggcccggatgtg
gtggaccacaagctgagactgtcatggccgtcggtggccaaacaggctataagggaaaag
attaaggctgaaaccctttcagaggaaatgaggatactgtacgttgccctgaccagagca
cgggaaaagcttgttataaccggtgctgtgaagaatgcgcgcaaggcggtggagaagtgg
ctggatagtgcatccgttcaggaaagcaggctttcggcctatgatatgctaagcggagcc
aattaccttgactggattggacctgcgcttttgaggcacaaaaactgcggcggacttagg
gactgtgtgggaagcgccggtttccggggactgctcatagatgacccgtcggtgtggagt
gtaaagatatggaataaaaccgatgtgcaaagcagcggagtttcggaggaacagggagaa
agtgagtttataaagtggctggacagtttggaaaaagaagagccttcggaatatgcagaa
gaaacagcaagaaggctaagctggagttatccttacgttaaagcttccaaagtgcctgca
aaggtttcagtgacggagctgaaaaggcgttacaacgagatggtttcggaagatgtaatg
caatttccggattacatgccggttttggtgaaaaagccaatgtttttggaggaaaagaaa
ggcctgacttatgccgagaagggcacgatacttcactttgtcatgcagcacttggattac
ggtagggaggatattgaagcccagattgaagaaatggtggcaaaaaatttgttgacacct
caacaggcacagagtgtggatgcagccagaatccggcgttttctaaattcccctcttgga
aagaggatgctggcctcaaaaagcataaaccgtgaggtgccgtttaatattgagataccg
tgccatgagctgtacagggatatggaagatgaggcctgtcacggtgagacacttcttctg
cagggagttgtcgactgctattttgaagagccggacggtattgtgctggtggattacaag
accgattatgtggctccggggaatgttgagacgattcgggaaagatacaaggtgcagatt
ctttattatgccagggcgctggagatgctcaccggaaagaaggtaaaggagaagtatata
tatcttttctgggatgggagaattttgggtttttga
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