KEGG   Acetivibrio thermocellus DSM 1313: Clo1313_2972
Entry
Clo1313_2972      CDS       T01933                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ctx  Acetivibrio thermocellus DSM 1313
Brite
KEGG Orthology (KO) [BR:ctx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ctx02048]
    Clo1313_2972
Enzymes [BR:ctx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Clo1313_2972
Prokaryotic defense system [BR:ctx02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Clo1313_2972
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C Cas3_HD ResIII HTH_16 MotCF
Other DBs
NCBI-ProteinID: ADU75950
LinkDB
Position
complement(3483922..3486174)
AA seq 750 aa
MYFAKPVDNYEGTYEYHVKRCAEILEFEIRSKYPAFKRILSSYGFDVEDFIEKMKTAVVF
HDFGKLNPYFQEYMKRKIEKKKLSGIKHFRHEVLSCLFLMSNEKSKEAYFPYHILAVLGH
HKMLSSDLKSFERERVWQDRWPEISEDAVKHAMEIASEFGIKVDGRSGPQGKSANNYLNA
LLKLALMLYEKDREKLKVVYSVSKGLLHNCDWIASSNLDYNRVCLIGVSANDIEKKLKEK
LEKENKKYVRREFHSICANAVGDVVAIAPTGSGKTEAALMWALNSETTKIIFLMPTMVTS
NSLYERLSTHYFPKESCGLSHSGAETYFYKKSKEDDTENDYDWSQILHQKAFIPAVMVST
VDQVLSTEFHTGLWNQKEYALVGSSVIFDEIHAYDGYTIGLITGVIKKIKKYGGRVMLMS
ATMPKFLRNHFLDLLDSKCLVVAEELMERASNEWAYLDTDLEGIREKVLKEVSEGKKVAL
IVNDVETAKKEYKYYSKKGFDVLCLHSEFTMKDRQEKEGRLTSKEGNPYRLVISTQVIEV
SLDVSFDVMFSECAPIDSLVQRAGRCNRHGLINFGRFYVFNPSDTAVKYVYRKQKDILDK
TVEVIRKNSGRLTEKQIMAMVEEVYEGFNLYDEDYKLGIDIVRDIEQRYNFFDVNIFQED
ENLSTRKFDVVKVPVIPADEYMEIVEKLFESKDYKMISLYEIPVSISKFKKYIRRLEISN
KYNLPIFKIKYSSEYGIDYEEDDSNTCYLY
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgtattttgcaaagcctgttgacaattatgaaggaacatacgagtatcatgtaaaaagg
tgcgctgaaatactggagtttgaaattaggtcaaagtatccggcctttaaacgaattctc
tcgagttacggatttgatgttgaggattttattgaaaaaatgaaaacagccgtagttttt
catgattttgggaagcttaatccgtattttcaagaatatatgaaaagaaaaatcgagaaa
aaaaagctttcaggtataaagcattttaggcacgaagttctttcgtgcctttttcttatg
tcaaatgagaagagtaaagaagcctacttcccatatcatatattggcggtgcttggacat
cacaaaatgctttcttcggatttgaaaagttttgaaagagagagggtttggcaggacagg
tggcctgagatttcagaagatgccgtaaaacatgcgatggaaattgcttctgagtttggg
ataaaagttgacggaagaagcggaccgcaagggaagagtgccaacaattatctgaatgct
ttgttaaagttggctttgatgttgtatgagaaagacagggaaaaactaaaagtggtttat
tctgtatcaaaggggcttttgcataactgtgactggatagcttcttcaaatcttgactac
aatagggtatgccttattggtgtatctgccaatgatattgaaaagaagcttaaggaaaag
ttggagaaagagaacaaaaaatatgtaagaagagagtttcactcaatatgtgccaatgca
gtcggggatgtggtggcgattgcacccacggggtccggaaagactgaggcggcattgatg
tgggctttgaattccgaaacaaccaaaattatttttctcatgccgacaatggttacttcc
aacagcctttatgagagactttcaacccattatttccccaaagagagctgtgggctgtcc
cattcaggggcggaaacgtatttttataaaaagtctaaagaagatgatacggaaaatgat
tatgactggtctcagattctacatcagaaggcttttattccggcggttatggtttcgaca
gtggaccaggttttgtccacggaatttcatacaggattatggaatcagaaggaatatgca
ctggtcggaagttcggtgatttttgacgaaatacatgcttatgatggctataccataggc
cttataaccggggttataaaaaagataaaaaagtatggcggcagggtcatgctgatgagt
gcgaccatgccgaagtttttaagaaatcattttttagaccttctcgattcaaaatgtttg
gttgttgcagaggagcttatggaaagggcaagcaatgaatgggcatacttggataccgat
cttgagggtataagggaaaaggtactgaaggaagtatcagaggggaagaaggtagcactt
attgtaaatgatgtggaaacggccaaaaaggagtataaatactactctaaaaaaggattt
gatgtattatgtcttcattctgaatttacaatgaaagaccggcaggaaaaagagggccgg
ttgacatcgaaagagggtaatccttaccggcttgtgatatccacccaagttatagaggtg
tctctggatgtaagttttgatgttatgttctcggagtgcgcgcctatagacagcctggtg
cagagggcgggaaggtgtaatcgccacggactcataaactttggaaggttttatgttttt
aatccttcggatactgctgtaaaatacgtctatcgaaaacagaaggatattcttgacaaa
actgttgaggtaataaggaaaaattcaggcagattaactgagaagcaaattatggctatg
gttgaggaagtttacgagggatttaatctgtatgatgaagattataaactgggaattgac
attgtacgggacattgaacagagatacaacttttttgatgtaaatattttccaagaagac
gagaatctttccacacgaaaatttgatgttgttaaagttccagttattcctgcggatgag
tatatggagattgtcgaaaagctgtttgaaagcaaggattataaaatgatatctctttat
gaaatacctgtttcaataagcaagtttaaaaagtatataagaaggctggaaataagcaat
aaatacaatttgcctatatttaaaataaagtatagcagtgagtatggcattgattatgag
gaggatgattcgaatacctgttatttatattag

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